Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9352.t1
Gene name
Locationscaffold_46:5975..8435
Strand+
Gene length (bp)2460
Transcript length (bp)2460
Coding sequence length (bp)2460
Protein length (aa) 820

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.4E-09 279 332
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3.8E-11 504 561
PF10378 RRM Putative RRM domain 2.6E-08 73 100

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 53 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9352.t1
MQASDVSSIPNNSRLIHPGSKYALNGDTGFSHGAYNNNHPNHIQGFSDRNTRRANIPAINTAAGQHSDMASGFDM
NYTPLLPSQLLVGSPFQPGTPSAFASPQFTNFGGFSQANGNGHSQNNQNHIHSPTQGMQNHGLYGMMSPDGMGIS
QMMGPQSPINGLGMGNGGLGSPQASVAPGMLSGTSRTVYLGNIPAETSAEEILNHVRSGQIESVRLLPDKNCAFI
SFLDSSSATHFHSDAILKKLAIKGNDIKVGWGKPSQVPTSVALAVQQSGASRNVYLGNLPEETSEEDLREDLGKF
GPIDTVKIVKEKAIGFVHFLSISNAMKSVTQLPQEPQWQAPKRVFYGKDRCAYVSKTQQQNAAQFLGIAPGYAHV
LNTADRDLISNALAQQSVAAAAVATTAGGVNNLGNRTIYLGNIHPETTIEEICNVVRGGLLHHVRYIPDKHICFV
TFIDPTSAASFYALSNLQGLMIHNRRLKIGWGKHSGPLPPAIALAVSGGASRNVYVGNLDEAWSEERLRQDFSEY
GEIELVNTLREKSCAFVNFTNIANAIKAIEGMRNREDYRRFKINFGKDRCGNPPRQAGNNQNGQNRNGGMEGQSP
PSVLNGFQQNLSQSGSQSSPTRPALSPASGSTGSHNGQHRHPLQNVTSPSGVLNIGSSNPLTMYLNQMSAHQAQE
QENHLHDHMALSGLQAQAQSQQSMYNSVSNGDMNGHMDQSMHQHKSSNSYLSVANGSGHGHHASTSSLSVPRASH
SRAVSLPSFSQEPFGPVSGQPHPRTGAHQPQSSFSSFSALGGLNHSGFGLAIQNENSLPGWAEEEIGAK*
Coding >Pro_DTO377G3_2|g9352.t1
ATGCAAGCCTCGGATGTATCGAGCATCCCGAACAATTCGCGTCTAATTCATCCTGGGTCTAAATACGCGCTGAAC
GGTGACACTGGCTTTTCTCACGGAGCGTACAACAACAACCACCCCAATCATATCCAAGGATTCTCGGACCGGAAT
ACGCGTCGCGCCAATATCCCCGCTATAAACACTGCCGCCGGCCAACACTCCGATATGGCTTCCGGCTTCGATATG
AACTACACCCCCCTGCTCCCTTCCCAGCTGCTGGTAGGCAGTCCCTTCCAACCAGGAACGCCCTCGGCTTTTGCT
TCGCCGCAGTTTACCAATTTCGGTGGCTTCTCACAAGCCAATGGCAATGGACACTCCCAAAACAACCAGAACCAT
ATCCACAGCCCTACGCAAGGAATGCAGAACCATGGTTTGTATGGCATGATGTCACCTGACGGTATGGGTATCTCC
CAGATGATGGGGCCGCAATCGCCGATTAATGGTCTTGGGATGGGCAATGGGGGTCTCGGCAGCCCCCAAGCGTCC
GTGGCCCCGGGCATGCTGTCGGGGACCAGTCGCACCGTGTATCTTGGAAACATCCCGGCTGAAACATCTGCCGAG
GAGATTTTAAACCACGTGCGTAGCGGTCAGATTGAGTCGGTGCGCCTGCTCCCTGATAAAAACTGCGCTTTCATC
TCCTTTTTGGATAGCAGCTCAGCCACTCATTTCCATTCCGATGCCATCTTGAAGAAGTTGGCCATCAAGGGAAAT
GATATCAAGGTCGGCTGGGGTAAGCCGTCGCAGGTTCCCACCTCAGTTGCCCTGGCTGTTCAACAGTCGGGCGCG
TCGCGTAATGTTTATCTTGGAAATTTGCCCGAGGAAACATCCGAGGAGGATCTGCGGGAGGATCTGGGCAAATTT
GGGCCCATTGACACCGTCAAGATCGTCAAGGAGAAGGCGATTGGATTCGTCCATTTCCTATCGATCAGTAATGCC
ATGAAGTCTGTCACCCAGCTCCCCCAGGAGCCGCAATGGCAAGCGCCAAAGCGGGTGTTCTACGGCAAGGACCGT
TGTGCGTATGTATCCAAGACTCAGCAGCAAAATGCTGCCCAGTTCCTCGGCATCGCACCCGGGTATGCACATGTG
CTGAACACGGCGGATCGTGATCTGATTTCTAATGCCCTTGCACAACAGTCTGTTGCCGCGGCCGCCGTGGCGACG
ACAGCAGGCGGTGTTAACAATCTCGGCAACCGCACCATTTACCTCGGAAACATTCACCCCGAAACAACGATCGAA
GAGATCTGCAATGTCGTTCGCGGAGGCTTGCTACACCATGTTCGGTATATCCCAGATAAGCACATTTGCTTCGTT
ACATTCATCGATCCCACTTCGGCCGCCTCCTTTTACGCCCTGAGCAACCTGCAGGGACTAATGATCCACAACCGG
CGCCTGAAGATTGGATGGGGCAAACACTCCGGCCCTCTCCCGCCCGCCATTGCGTTAGCAGTCAGCGGCGGTGCG
TCACGCAATGTCTATGTTGGTAACTTGGACGAGGCCTGGTCGGAGGAACGCCTTCGCCAGGACTTCTCGGAGTAT
GGTGAGATCGAGTTGGTGAACACGCTGCGCGAGAAGAGTTGTGCCTTTGTCAACTTCACGAATATCGCCAATGCC
ATCAAGGCTATTGAGGGAATGCGTAATCGGGAGGACTACCGGCGGTTCAAGATCAACTTTGGAAAGGACCGCTGC
GGAAACCCACCGCGTCAAGCCGGAAACAACCAAAATGGACAGAACCGCAACGGAGGCATGGAAGGCCAGTCACCA
CCGTCCGTTCTCAACGGATTCCAGCAGAACCTCAGCCAGTCTGGCTCCCAGTCAAGTCCGACTCGCCCTGCCCTT
TCCCCGGCATCGGGATCAACTGGGTCGCATAACGGACAGCATCGCCACCCGCTGCAGAACGTGACCTCTCCTTCT
GGGGTCCTGAATATCGGCTCAAGCAACCCGTTGACGATGTACCTGAACCAGATGTCTGCTCATCAGGCCCAGGAG
CAGGAGAACCATCTCCACGACCATATGGCCCTCTCTGGTCTACAGGCGCAGGCACAATCACAGCAGTCAATGTAT
AACAGCGTCAGCAACGGCGACATGAATGGACACATGGACCAGTCTATGCACCAGCACAAGTCCTCCAACAGCTAC
CTGAGTGTGGCAAATGGATCGGGACACGGCCACCACGCAAGCACCAGCAGTCTGAGCGTGCCCCGTGCTTCGCAC
TCACGGGCTGTCAGCCTGCCCTCATTCTCCCAGGAGCCCTTCGGACCTGTCTCTGGTCAACCCCACCCCCGCACA
GGTGCCCACCAGCCTCAGAGCAGCTTCTCCAGCTTCTCTGCCCTCGGTGGACTGAACCACTCAGGATTTGGTCTG
GCTATTCAAAACGAAAACTCGCTGCCCGGCTGGGCTGAAGAGGAGATCGGAGCCAAATAA
Transcript >Pro_DTO377G3_2|g9352.t1
ATGCAAGCCTCGGATGTATCGAGCATCCCGAACAATTCGCGTCTAATTCATCCTGGGTCTAAATACGCGCTGAAC
GGTGACACTGGCTTTTCTCACGGAGCGTACAACAACAACCACCCCAATCATATCCAAGGATTCTCGGACCGGAAT
ACGCGTCGCGCCAATATCCCCGCTATAAACACTGCCGCCGGCCAACACTCCGATATGGCTTCCGGCTTCGATATG
AACTACACCCCCCTGCTCCCTTCCCAGCTGCTGGTAGGCAGTCCCTTCCAACCAGGAACGCCCTCGGCTTTTGCT
TCGCCGCAGTTTACCAATTTCGGTGGCTTCTCACAAGCCAATGGCAATGGACACTCCCAAAACAACCAGAACCAT
ATCCACAGCCCTACGCAAGGAATGCAGAACCATGGTTTGTATGGCATGATGTCACCTGACGGTATGGGTATCTCC
CAGATGATGGGGCCGCAATCGCCGATTAATGGTCTTGGGATGGGCAATGGGGGTCTCGGCAGCCCCCAAGCGTCC
GTGGCCCCGGGCATGCTGTCGGGGACCAGTCGCACCGTGTATCTTGGAAACATCCCGGCTGAAACATCTGCCGAG
GAGATTTTAAACCACGTGCGTAGCGGTCAGATTGAGTCGGTGCGCCTGCTCCCTGATAAAAACTGCGCTTTCATC
TCCTTTTTGGATAGCAGCTCAGCCACTCATTTCCATTCCGATGCCATCTTGAAGAAGTTGGCCATCAAGGGAAAT
GATATCAAGGTCGGCTGGGGTAAGCCGTCGCAGGTTCCCACCTCAGTTGCCCTGGCTGTTCAACAGTCGGGCGCG
TCGCGTAATGTTTATCTTGGAAATTTGCCCGAGGAAACATCCGAGGAGGATCTGCGGGAGGATCTGGGCAAATTT
GGGCCCATTGACACCGTCAAGATCGTCAAGGAGAAGGCGATTGGATTCGTCCATTTCCTATCGATCAGTAATGCC
ATGAAGTCTGTCACCCAGCTCCCCCAGGAGCCGCAATGGCAAGCGCCAAAGCGGGTGTTCTACGGCAAGGACCGT
TGTGCGTATGTATCCAAGACTCAGCAGCAAAATGCTGCCCAGTTCCTCGGCATCGCACCCGGGTATGCACATGTG
CTGAACACGGCGGATCGTGATCTGATTTCTAATGCCCTTGCACAACAGTCTGTTGCCGCGGCCGCCGTGGCGACG
ACAGCAGGCGGTGTTAACAATCTCGGCAACCGCACCATTTACCTCGGAAACATTCACCCCGAAACAACGATCGAA
GAGATCTGCAATGTCGTTCGCGGAGGCTTGCTACACCATGTTCGGTATATCCCAGATAAGCACATTTGCTTCGTT
ACATTCATCGATCCCACTTCGGCCGCCTCCTTTTACGCCCTGAGCAACCTGCAGGGACTAATGATCCACAACCGG
CGCCTGAAGATTGGATGGGGCAAACACTCCGGCCCTCTCCCGCCCGCCATTGCGTTAGCAGTCAGCGGCGGTGCG
TCACGCAATGTCTATGTTGGTAACTTGGACGAGGCCTGGTCGGAGGAACGCCTTCGCCAGGACTTCTCGGAGTAT
GGTGAGATCGAGTTGGTGAACACGCTGCGCGAGAAGAGTTGTGCCTTTGTCAACTTCACGAATATCGCCAATGCC
ATCAAGGCTATTGAGGGAATGCGTAATCGGGAGGACTACCGGCGGTTCAAGATCAACTTTGGAAAGGACCGCTGC
GGAAACCCACCGCGTCAAGCCGGAAACAACCAAAATGGACAGAACCGCAACGGAGGCATGGAAGGCCAGTCACCA
CCGTCCGTTCTCAACGGATTCCAGCAGAACCTCAGCCAGTCTGGCTCCCAGTCAAGTCCGACTCGCCCTGCCCTT
TCCCCGGCATCGGGATCAACTGGGTCGCATAACGGACAGCATCGCCACCCGCTGCAGAACGTGACCTCTCCTTCT
GGGGTCCTGAATATCGGCTCAAGCAACCCGTTGACGATGTACCTGAACCAGATGTCTGCTCATCAGGCCCAGGAG
CAGGAGAACCATCTCCACGACCATATGGCCCTCTCTGGTCTACAGGCGCAGGCACAATCACAGCAGTCAATGTAT
AACAGCGTCAGCAACGGCGACATGAATGGACACATGGACCAGTCTATGCACCAGCACAAGTCCTCCAACAGCTAC
CTGAGTGTGGCAAATGGATCGGGACACGGCCACCACGCAAGCACCAGCAGTCTGAGCGTGCCCCGTGCTTCGCAC
TCACGGGCTGTCAGCCTGCCCTCATTCTCCCAGGAGCCCTTCGGACCTGTCTCTGGTCAACCCCACCCCCGCACA
GGTGCCCACCAGCCTCAGAGCAGCTTCTCCAGCTTCTCTGCCCTCGGTGGACTGAACCACTCAGGATTTGGTCTG
GCTATTCAAAACGAAAACTCGCTGCCCGGCTGGGCTGAAGAGGAGATCGGAGCCAAATAA
Gene >Pro_DTO377G3_2|g9352.t1
ATGCAAGCCTCGGATGTATCGAGCATCCCGAACAATTCGCGTCTAATTCATCCTGGGTCTAAATACGCGCTGAAC
GGTGACACTGGCTTTTCTCACGGAGCGTACAACAACAACCACCCCAATCATATCCAAGGATTCTCGGACCGGAAT
ACGCGTCGCGCCAATATCCCCGCTATAAACACTGCCGCCGGCCAACACTCCGATATGGCTTCCGGCTTCGATATG
AACTACACCCCCCTGCTCCCTTCCCAGCTGCTGGTAGGCAGTCCCTTCCAACCAGGAACGCCCTCGGCTTTTGCT
TCGCCGCAGTTTACCAATTTCGGTGGCTTCTCACAAGCCAATGGCAATGGACACTCCCAAAACAACCAGAACCAT
ATCCACAGCCCTACGCAAGGAATGCAGAACCATGGTTTGTATGGCATGATGTCACCTGACGGTATGGGTATCTCC
CAGATGATGGGGCCGCAATCGCCGATTAATGGTCTTGGGATGGGCAATGGGGGTCTCGGCAGCCCCCAAGCGTCC
GTGGCCCCGGGCATGCTGTCGGGGACCAGTCGCACCGTGTATCTTGGAAACATCCCGGCTGAAACATCTGCCGAG
GAGATTTTAAACCACGTGCGTAGCGGTCAGATTGAGTCGGTGCGCCTGCTCCCTGATAAAAACTGCGCTTTCATC
TCCTTTTTGGATAGCAGCTCAGCCACTCATTTCCATTCCGATGCCATCTTGAAGAAGTTGGCCATCAAGGGAAAT
GATATCAAGGTCGGCTGGGGTAAGCCGTCGCAGGTTCCCACCTCAGTTGCCCTGGCTGTTCAACAGTCGGGCGCG
TCGCGTAATGTTTATCTTGGAAATTTGCCCGAGGAAACATCCGAGGAGGATCTGCGGGAGGATCTGGGCAAATTT
GGGCCCATTGACACCGTCAAGATCGTCAAGGAGAAGGCGATTGGATTCGTCCATTTCCTATCGATCAGTAATGCC
ATGAAGTCTGTCACCCAGCTCCCCCAGGAGCCGCAATGGCAAGCGCCAAAGCGGGTGTTCTACGGCAAGGACCGT
TGTGCGTATGTATCCAAGACTCAGCAGCAAAATGCTGCCCAGTTCCTCGGCATCGCACCCGGGTATGCACATGTG
CTGAACACGGCGGATCGTGATCTGATTTCTAATGCCCTTGCACAACAGTCTGTTGCCGCGGCCGCCGTGGCGACG
ACAGCAGGCGGTGTTAACAATCTCGGCAACCGCACCATTTACCTCGGAAACATTCACCCCGAAACAACGATCGAA
GAGATCTGCAATGTCGTTCGCGGAGGCTTGCTACACCATGTTCGGTATATCCCAGATAAGCACATTTGCTTCGTT
ACATTCATCGATCCCACTTCGGCCGCCTCCTTTTACGCCCTGAGCAACCTGCAGGGACTAATGATCCACAACCGG
CGCCTGAAGATTGGATGGGGCAAACACTCCGGCCCTCTCCCGCCCGCCATTGCGTTAGCAGTCAGCGGCGGTGCG
TCACGCAATGTCTATGTTGGTAACTTGGACGAGGCCTGGTCGGAGGAACGCCTTCGCCAGGACTTCTCGGAGTAT
GGTGAGATCGAGTTGGTGAACACGCTGCGCGAGAAGAGTTGTGCCTTTGTCAACTTCACGAATATCGCCAATGCC
ATCAAGGCTATTGAGGGAATGCGTAATCGGGAGGACTACCGGCGGTTCAAGATCAACTTTGGAAAGGACCGCTGC
GGAAACCCACCGCGTCAAGCCGGAAACAACCAAAATGGACAGAACCGCAACGGAGGCATGGAAGGCCAGTCACCA
CCGTCCGTTCTCAACGGATTCCAGCAGAACCTCAGCCAGTCTGGCTCCCAGTCAAGTCCGACTCGCCCTGCCCTT
TCCCCGGCATCGGGATCAACTGGGTCGCATAACGGACAGCATCGCCACCCGCTGCAGAACGTGACCTCTCCTTCT
GGGGTCCTGAATATCGGCTCAAGCAACCCGTTGACGATGTACCTGAACCAGATGTCTGCTCATCAGGCCCAGGAG
CAGGAGAACCATCTCCACGACCATATGGCCCTCTCTGGTCTACAGGCGCAGGCACAATCACAGCAGTCAATGTAT
AACAGCGTCAGCAACGGCGACATGAATGGACACATGGACCAGTCTATGCACCAGCACAAGTCCTCCAACAGCTAC
CTGAGTGTGGCAAATGGATCGGGACACGGCCACCACGCAAGCACCAGCAGTCTGAGCGTGCCCCGTGCTTCGCAC
TCACGGGCTGTCAGCCTGCCCTCATTCTCCCAGGAGCCCTTCGGACCTGTCTCTGGTCAACCCCACCCCCGCACA
GGTGCCCACCAGCCTCAGAGCAGCTTCTCCAGCTTCTCTGCCCTCGGTGGACTGAACCACTCAGGATTTGGTCTG
GCTATTCAAAACGAAAACTCGCTGCCCGGCTGGGCTGAAGAGGAGATCGGAGCCAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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