© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g9349.t1 |
| Gene name | |
| Location | scaffold_45:148641..149731 |
| Strand | + |
| Gene length (bp) | 1090 |
| Transcript length (bp) | 918 |
| Coding sequence length (bp) | 918 |
| Protein length (aa) | 306 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00970 | FAD_binding_6 | Oxidoreductase FAD-binding domain | 4.1E-33 | 61 | 160 |
| PF00175 | NAD_binding_1 | Oxidoreductase NAD-binding domain | 1.7E-27 | 170 | 281 |
| PF08030 | NAD_binding_6 | Ferric reductase NAD binding domain | 9.0E-05 | 167 | 228 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 2 | 23 | 21 |
| 2 | 27 | 44 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g9349.t1 MSLANIGTALVPSALLIASVYAIKPEFIAYAIAVAGVLAGYLVFSTSKPRKVLNPTEFQNFVLKEKNEISHNVAI YRFALPRSTDILGLPIGQHISLAATIAGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTELKIGDNMK VRGPKGAMVYTPNMCRHIGMISGGTGITPMLQVIKAIIRNRPRNGGNDTTKVDLIFANVNPEDILLKDQLEELEK EDDGFRIYYVLNNPPEGWTGGVGFVTPDMIKERLPAPAADVKILLCGPPPMVSAMKKATEALGYTKARPVSKLED QVFCF* |
| Coding | >Pro_DTO377G3_2|g9349.t1 ATGAGCCTCGCCAACATCGGCACGGCCCTCGTGCCCTCGGCCCTGCTCATCGCGAGTGTTTACGCCATTAAGCCC GAGTTTATCGCCTATGCAATTGCTGTCGCTGGAGTTCTGGCTGGTTACTTGGTTTTCAGCACCAGTAAGCCTCGC AAGGTCTTGAACCCCACCGAGTTCCAGAACTTCGTCCTCAAGGAGAAGAACGAGATCTCTCACAATGTCGCTATC TACCGTTTTGCCCTCCCCCGTTCCACCGATATCCTCGGCCTCCCCATCGGTCAGCACATCTCTCTCGCCGCCACT ATCGCCGGTCAGCCCAAGGAGGTTGTCCGCTCTTACACCCCTATCTCCTCCGACAATGAGGCCGGCTACTTCGAT CTGCTCGTCAAGGCTTACCCCCAGGGTAACATCTCCAAGTATCTTACCGAACTGAAGATTGGCGACAACATGAAG GTCCGTGGCCCCAAGGGCGCCATGGTGTACACCCCCAACATGTGCCGCCACATTGGTATGATCTCCGGCGGCACT GGTATTACCCCTATGCTGCAGGTCATCAAGGCCATCATCCGCAACCGTCCCCGCAACGGTGGCAACGACACCACC AAGGTTGACCTCATCTTCGCCAACGTCAACCCCGAGGACATCTTGCTCAAGGACCAGCTCGAGGAGTTGGAGAAG GAGGATGATGGATTCCGCATCTACTACGTTCTTAACAACCCGCCCGAGGGCTGGACTGGCGGTGTTGGCTTTGTG ACTCCCGACATGATCAAGGAGCGCCTGCCCGCCCCCGCTGCCGATGTTAAGATTTTGCTCTGCGGTCCCCCTCCC ATGGTCAGCGCGATGAAGAAGGCCACCGAGGCTCTTGGATACACCAAGGCGCGCCCCGTCAGCAAGCTGGAGGAC CAGGTCTTCTGCTTCTAA |
| Transcript | >Pro_DTO377G3_2|g9349.t1 ATGAGCCTCGCCAACATCGGCACGGCCCTCGTGCCCTCGGCCCTGCTCATCGCGAGTGTTTACGCCATTAAGCCC GAGTTTATCGCCTATGCAATTGCTGTCGCTGGAGTTCTGGCTGGTTACTTGGTTTTCAGCACCAGTAAGCCTCGC AAGGTCTTGAACCCCACCGAGTTCCAGAACTTCGTCCTCAAGGAGAAGAACGAGATCTCTCACAATGTCGCTATC TACCGTTTTGCCCTCCCCCGTTCCACCGATATCCTCGGCCTCCCCATCGGTCAGCACATCTCTCTCGCCGCCACT ATCGCCGGTCAGCCCAAGGAGGTTGTCCGCTCTTACACCCCTATCTCCTCCGACAATGAGGCCGGCTACTTCGAT CTGCTCGTCAAGGCTTACCCCCAGGGTAACATCTCCAAGTATCTTACCGAACTGAAGATTGGCGACAACATGAAG GTCCGTGGCCCCAAGGGCGCCATGGTGTACACCCCCAACATGTGCCGCCACATTGGTATGATCTCCGGCGGCACT GGTATTACCCCTATGCTGCAGGTCATCAAGGCCATCATCCGCAACCGTCCCCGCAACGGTGGCAACGACACCACC AAGGTTGACCTCATCTTCGCCAACGTCAACCCCGAGGACATCTTGCTCAAGGACCAGCTCGAGGAGTTGGAGAAG GAGGATGATGGATTCCGCATCTACTACGTTCTTAACAACCCGCCCGAGGGCTGGACTGGCGGTGTTGGCTTTGTG ACTCCCGACATGATCAAGGAGCGCCTGCCCGCCCCCGCTGCCGATGTTAAGATTTTGCTCTGCGGTCCCCCTCCC ATGGTCAGCGCGATGAAGAAGGCCACCGAGGCTCTTGGATACACCAAGGCGCGCCCCGTCAGCAAGCTGGAGGAC CAGGTCTTCTGCTTCTAA |
| Gene | >Pro_DTO377G3_2|g9349.t1 ATGAGGTGAGTCGATCTTCTCCTGTAATATCGAACAATGGCTGATTCCTCCAAGCCTCGCCAACATCGGCACGGC CCTCGTGCCCTCGGCCCTGCTCATCGCGAGTGTTTACGCCATTAAGCCCGAGTTTATCGCCTATGCAATTGCTGT CGCTGGAGTTCTGGCTGGTTACTTGGTTTTCAGCACCAGTAGTGCGTGCATCTTTTTATGTCCAAATACTGGAGT GAGGAATTAAGCTGACCCCCGATGTCGCAGAGCCTCGCAAGGTCTTGAACCCCACCGAGTTCCAGAACTTCGTCC TCAAGGAGAAGAACGAGATCTCTCACAATGTCGCTATCTACCGTTTTGCCCTCCCCCGTTCCACCGATATCCTCG GCCTCCCCATCGGTCAGCACATCTCTCTCGCCGCCACTATCGCCGGTCAGCCCAAGGAGGTTGTCCGCTCTTACA CCCCTATCTCCTCCGACAATGAGGCCGGCTACTTCGATCTGCTCGTCAAGGCTTACCCCCAGGGTAACATCTCCA AGTATCTTACCGAACTGAAGATTGGCGACAACATGAAGGTCCGTGGCCCCAAGGGCGCCATGGTGTACACCCCCA ACATGTGCCGCCACATTGGTATGATCTCCGGCGGCACTGGTATTACCCCTATGCTGCAGGTCATCAAGGCCATCA TCCGCAACCGTCCCCGCAACGGTGGCAACGACACCACCAAGGTTGACCTCATCTTCGCCAACGTCAACCCCGAGG ACATCTTGCTCAAGGACCAGCTCGAGGAGTTGGAGAAGGAGGATGATGGATTCCGCATCTACTACGTTCTTAACA ACCCGCCCGAGGGCTGGACTGGCGGTGTTGGCTTTGTGACTCCCGACATGATCAAGGTAAGTTTGCGTGCTGTGC TCGCCTGTGCCACCTCGGTATTAATTAAGCTTTATTATAGGAGCGCCTGCCCGCCCCCGCTGCCGATGTTAAGAT TTTGCTCTGCGGTCCCCCTCCCATGGTCAGCGCGATGAAGAAGGCCACCGAGGCTCTTGGATACACCAAGGCGCG CCCCGTCAGCAAGCTGGAGGACCAGGTCTTCTGCTTCTAA |