Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g9326.t1
Gene name
Location	scaffold_45:84832..85650
Strand	+
Gene length (bp)	818
Transcript length (bp)	750
Coding sequence length (bp)	750
Protein length (aa)	250

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00808	CBFD_NFYB_HMF	Histone-like transcription factor (CBF/NF-Y) and archaeal histone	1.0E-15	137	200

GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 25	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
Histone-like TF

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g9326.t1 MTENNYRPRSPDLSLPPPQQYALASPITSHESPFFNSYQPHQRPILSRVGQQYVPPYQPDSDMARRSSRLAQSDR TPIPEPMPEAILPIPEAIQPIPEAIQPTPEPIAMAPVPAIAPEIEEEMPPAPPSAAIEVKTKFPVARIKRIMQAD EDVGKVAQVTPIAVSKALELFMISLVTKAAQEAKDRNSKRVTASHLKQAVAKDEVLDFLADIISKIPDQPASRKH EDDGSDQNEGRRKRGGRRPKDESD*
Coding	>Pro_DTO377G3_2\|g9326.t1 ATGACAGAGAACAATTATCGGCCTCGCTCTCCTGATCTATCTCTTCCTCCTCCTCAACAATACGCGCTTGCGAGT CCAATTACATCCCACGAATCTCCCTTCTTCAACTCATACCAACCTCACCAACGCCCAATTCTAAGTCGCGTGGGT CAACAATACGTTCCACCTTATCAGCCAGACTCGGACATGGCTCGCCGTTCTAGCCGTCTTGCTCAGTCCGACCGT ACCCCCATCCCAGAACCCATGCCCGAGGCAATTCTACCAATCCCAGAGGCAATCCAACCAATCCCAGAGGCAATC CAACCAACCCCAGAGCCGATCGCAATGGCGCCGGTCCCCGCTATTGCGCCGGAGATAGAGGAAGAGATGCCACCG GCGCCTCCGAGTGCGGCGATTGAAGTAAAGACCAAGTTTCCCGTGGCGCGCATCAAGCGCATCATGCAGGCCGAT GAGGATGTCGGCAAGGTTGCTCAAGTGACACCGATTGCTGTGTCCAAGGCTCTCGAACTCTTCATGATCTCTCTT GTCACCAAGGCGGCACAAGAAGCAAAGGACCGCAACTCAAAGCGCGTCACGGCCTCGCATCTCAAACAGGCCGTC GCCAAGGATGAAGTGCTTGACTTCTTGGCTGACATCATCTCCAAGATCCCTGATCAACCCGCCAGTCGCAAACAC GAAGACGACGGGAGCGATCAAAATGAGGGTCGCCGTAAGCGTGGCGGGCGGCGACCGAAGGATGAAAGTGATTGA
Transcript	>Pro_DTO377G3_2\|g9326.t1 ATGACAGAGAACAATTATCGGCCTCGCTCTCCTGATCTATCTCTTCCTCCTCCTCAACAATACGCGCTTGCGAGT CCAATTACATCCCACGAATCTCCCTTCTTCAACTCATACCAACCTCACCAACGCCCAATTCTAAGTCGCGTGGGT CAACAATACGTTCCACCTTATCAGCCAGACTCGGACATGGCTCGCCGTTCTAGCCGTCTTGCTCAGTCCGACCGT ACCCCCATCCCAGAACCCATGCCCGAGGCAATTCTACCAATCCCAGAGGCAATCCAACCAATCCCAGAGGCAATC CAACCAACCCCAGAGCCGATCGCAATGGCGCCGGTCCCCGCTATTGCGCCGGAGATAGAGGAAGAGATGCCACCG GCGCCTCCGAGTGCGGCGATTGAAGTAAAGACCAAGTTTCCCGTGGCGCGCATCAAGCGCATCATGCAGGCCGAT GAGGATGTCGGCAAGGTTGCTCAAGTGACACCGATTGCTGTGTCCAAGGCTCTCGAACTCTTCATGATCTCTCTT GTCACCAAGGCGGCACAAGAAGCAAAGGACCGCAACTCAAAGCGCGTCACGGCCTCGCATCTCAAACAGGCCGTC GCCAAGGATGAAGTGCTTGACTTCTTGGCTGACATCATCTCCAAGATCCCTGATCAACCCGCCAGTCGCAAACAC GAAGACGACGGGAGCGATCAAAATGAGGGTCGCCGTAAGCGTGGCGGGCGGCGACCGAAGGATGAAAGTGATTGA
Gene	>Pro_DTO377G3_2\|g9326.t1 ATGACAGAGAACAATTATCGGCCTCGCTCTCCTGATCTATCTCTTCCTCCTCCTCAACAATACGCGCTTGCGAGT CCAATTACATCCCACGAATCTCCCTTCTTCAACTCATACCAACCTCACCAACGCCCAATTCTAAGTCGCGTGGGT CAACAATACGTTCCACCTTATCAGCCAGACTCGGACATGGCTCGCCGTTCTAGCCGTCTTGCTCAGTCCGACCGT ACCCCCATCCCAGAACCCATGCCCGAGGCAATTCTACCAATCCCAGAGGCAATCCAACCAATCCCAGAGGCAATC CAACCAACCCCAGAGCCGATCGCAATGGCGCCGGTCCCCGCTATTGCGCCGGAGATAGAGGAAGAGATGCCACCG GCGCCTCCGAGTGCGGCGATTGAAGTAAAGACCAAGTTTCCCGTGGCGCGCATCAAGCGCATCATGCAGGCCGAT GAGGATGTCGGCAAGGTTGCTCAAGTGACACCGATTGCTGTGTGTATGTACGCCCTTTGCGCTCCCCTTATTACC AATCTGCCAGAGATACTGACCAGACTCTTTTGATAGCCAAGGCTCTCGAACTCTTCATGATCTCTCTTGTCACCA AGGCGGCACAAGAAGCAAAGGACCGCAACTCAAAGCGCGTCACGGCCTCGCATCTCAAACAGGCCGTCGCCAAGG ATGAAGTGCTTGACTTCTTGGCTGACATCATCTCCAAGATCCCTGATCAACCCGCCAGTCGCAAACACGAAGACG ACGGGAGCGATCAAAATGAGGGTCGCCGTAAGCGTGGCGGGCGGCGACCGAAGGATGAAAGTGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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