Protein ID | Pro_DTO377G3_2|g9323.t1 |
Gene name | |
Location | scaffold_45:74719..77674 |
Strand | - |
Gene length (bp) | 2955 |
Transcript length (bp) | 2733 |
Coding sequence length (bp) | 2733 |
Protein length (aa) | 911 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00225 | Kinesin | Kinesin motor domain | 1.5E-104 | 567 | 895 |
PF16796 | Microtub_bd | Microtubule binding | 4.2E-62 | 541 | 710 |
GO Term | Description | Terminal node |
---|---|---|
GO:0008017 | microtubule binding | Yes |
GO:0003777 | microtubule motor activity | Yes |
GO:0005524 | ATP binding | Yes |
GO:0007018 | microtubule-based movement | Yes |
GO:0005488 | binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0043167 | ion binding | No |
GO:0008150 | biological_process | No |
GO:0017076 | purine nucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0140657 | ATP-dependent activity | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0015631 | tubulin binding | No |
GO:0007017 | microtubule-based process | No |
GO:0000166 | nucleotide binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0005515 | protein binding | No |
GO:0036094 | small molecule binding | No |
GO:0003674 | molecular_function | No |
GO:0008092 | cytoskeletal protein binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043168 | anion binding | No |
GO:0009987 | cellular process | No |
GO:0003774 | cytoskeletal motor activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 15.11 | 8.32 | 21.90 |
5d_25C | Five days - 25 degrees Celsius | 12.06 | 6.28 | 17.83 |
7d_25C | Seven days - 25 degrees Celsius | 11.94 | 6.15 | 17.73 |
10d_25C | Ten days - 25 degrees Celsius | 11.48 | 5.90 | 17.07 |
7d_15C | Seven days - 15 degrees Celsius | 10.09 | 4.76 | 15.42 |
7d_30C | Seven days - 30 degrees Celsius | 15.86 | 8.75 | 22.98 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.449030 | no |
3d_25C | 7d_25C | 0.428099 | no |
3d_25C | 7d_15C | 0.152550 | no |
3d_25C | 7d_30C | 0.898792 | no |
3d_25C | 10d_25C | 0.342182 | no |
5d_25C | 7d_25C | 0.981280 | no |
5d_25C | 7d_15C | 0.608794 | no |
5d_25C | 7d_30C | 0.323738 | no |
5d_25C | 10d_25C | 0.904661 | no |
7d_25C | 7d_15C | 0.638728 | no |
7d_25C | 7d_30C | 0.313873 | no |
7d_25C | 10d_25C | 0.927466 | no |
7d_15C | 7d_30C | 0.099018 | no |
7d_15C | 10d_25C | 0.732994 | no |
7d_30C | 10d_25C | 0.243976 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g9323.t1 MDGENITRTRSSTRTRLPQAGLREASSATTNSRSGIMAPGTIANKAISTSPTRPKTGNPEIKRPGSVTRQPSTTT RAHSRGNSYSSSTMSRPIAPASRTANGSFSSTVGPGTRPASAMSRHQSSFIGRRPVGASIPRAASALDTHMEDVS PSVLGKRKGMLQFLSSPSRIPSCPVGTVSPGLDEGWNGISELAALPVSENPVSLPKPSNLATIPVLPSTPFRNVS TVTTPKSPGYAHSFSSSSSYFTAPTAPPRTPSYSQRRIVKKPSHPAFLTKGSSIRSFDNITGPEWDQASREKSME GLMQTFMAQVNQQGQASSGLKETLEIYKSRINELEASRDELKELNITQRVELDSLRNHLSTAEQARKEDKREHEI AMDDLYQRQRIELDSLQQQSRREVATITDRHQEEVRDLKRRFDREIEDEKAARVSALGKLTSQSALDIQKSQIEL ERKDREITTLKDGLHALKAEVDRERRMVQELKLNLDTTSSNSVTLESSIRALKARIEFLESGREEQSKSFERCNR EMMDAFAETEAIKEKLRREETLRRKLHNQVQELKGNIRVFCRVRPSLKSEPTSDLTLMQYPDETDDGKEINILGP EERTSLGTVTRKNNTFSFDRVFNPSTQNAEVFDEISQLVQSALDGYNVCIFCYGQTGSGKTHTMSSADGMIPRAV HQIYETAQGLEEKGWRYSMAGNFVEVYNENLNDLLGNPDELDKKKHEIRHDMQRGKTTITDITTVNLDSPEMVES ILKNADANRSVAATKANERSSRSHSVFILKLTGQNHITGERSEGTLNLVDLAGSERLSHSGATGERLKETQNINR SLSSLGDVISALGQGKEGGHIPYRNSKLTYLLQFSLGGNSKTLMFVMVSPLQAHMSETLTSLKFATKVHNTHIGT AKRQARVRDT* |
Coding | >Pro_DTO377G3_2|g9323.t1 ATGGACGGTGAAAACATAACCAGAACCAGGTCGTCTACTCGGACACGGCTACCACAGGCCGGCCTACGTGAAGCC AGCTCTGCGACAACCAACTCGCGCTCTGGCATCATGGCGCCAGGTACAATCGCAAACAAGGCTATCAGCACGTCG CCAACCCGTCCGAAAACCGGAAACCCGGAAATCAAGAGACCTGGATCCGTCACTCGACAGCCTAGCACCACGACC AGGGCGCATAGCCGAGGAAACTCGTACTCGTCTTCAACGATGTCCCGGCCGATTGCACCTGCATCCCGCACAGCC AACGGCTCCTTTTCCTCAACCGTCGGCCCTGGCACGCGCCCAGCATCGGCCATGTCCCGGCATCAATCGTCCTTT ATCGGCCGCAGACCCGTCGGCGCATCGATCCCCCGCGCAGCGAGCGCCTTGGATACCCATATGGAAGACGTCTCT CCCAGTGTGCTAGGAAAACGAAAGGGTATGCTACAATTTCTCTCATCTCCCAGCCGTATCCCTTCTTGCCCCGTT GGAACCGTTTCCCCCGGATTGGATGAAGGTTGGAATGGAATTAGTGAATTGGCAGCGCTCCCAGTGTCTGAGAAC CCTGTCTCTTTGCCAAAGCCTTCCAATCTAGCAACTATCCCCGTGTTGCCCAGTACCCCATTTCGGAATGTCTCC ACTGTTACCACCCCAAAGTCACCCGGATATGCGCATTCATTCTCGTCCTCTTCTTCTTATTTTACCGCTCCCACT GCACCCCCTAGAACACCATCATATTCCCAGCGGCGCATTGTCAAGAAGCCCTCCCACCCCGCATTTTTGACCAAA GGTTCTTCGATCAGAAGTTTTGACAATATCACAGGCCCGGAATGGGATCAAGCTTCTCGCGAAAAGAGTATGGAG GGATTGATGCAGACTTTTATGGCCCAGGTAAATCAACAAGGTCAAGCAAGCTCCGGTCTCAAGGAGACACTTGAG ATCTACAAGTCCAGAATCAACGAGCTCGAAGCCTCTCGGGATGAATTGAAAGAACTCAATATTACCCAGCGGGTG GAGTTAGATTCGCTGCGAAATCATCTAAGTACGGCAGAACAGGCGCGTAAAGAGGACAAGCGAGAGCATGAAATC GCTATGGATGATCTTTACCAGCGCCAGCGTATTGAATTGGATTCACTCCAGCAACAAAGCAGAAGAGAAGTCGCC ACAATCACTGACCGACATCAAGAGGAGGTTCGCGATCTGAAACGACGGTTTGACCGTGAGATTGAAGACGAGAAA GCAGCACGAGTAAGCGCGCTCGGCAAGCTGACTTCCCAATCTGCGCTTGACATTCAGAAGTCGCAAATTGAGCTA GAAAGGAAGGACCGCGAAATCACAACATTGAAGGATGGGCTACATGCCCTGAAGGCAGAGGTCGACCGCGAACGA AGGATGGTGCAAGAACTCAAACTCAACTTGGATACCACAAGTAGCAACAGTGTTACGCTAGAGTCATCAATACGT GCTCTCAAGGCACGCATCGAGTTCCTTGAAAGTGGACGGGAGGAGCAGTCTAAATCCTTTGAGCGGTGCAATCGG GAGATGATGGATGCATTTGCCGAGACAGAGGCGATAAAAGAGAAGCTGCGCAGGGAAGAGACACTTCGACGCAAA CTTCATAACCAGGTGCAAGAGCTCAAAGGCAACATCCGCGTGTTCTGCCGAGTTCGCCCCTCGCTTAAGAGTGAA CCTACTTCCGATCTCACTCTTATGCAGTATCCAGATGAAACTGATGATGGAAAGGAGATTAATATTCTTGGTCCC GAAGAGAGGACCAGCCTTGGAACAGTTACCAGGAAGAACAACACTTTCTCGTTTGATCGTGTATTCAATCCATCT ACACAGAACGCCGAGGTCTTTGATGAGATTAGCCAGCTTGTTCAGAGCGCCCTGGATGGCTACAATGTTTGCATT TTCTGTTATGGCCAAACTGGTAGTGGCAAGACACACACAATGTCATCGGCCGACGGCATGATCCCTCGTGCTGTT CACCAGATTTACGAGACCGCGCAAGGTCTGGAAGAGAAGGGTTGGCGGTACTCAATGGCAGGCAACTTTGTCGAA GTCTACAACGAAAACCTCAATGATCTGTTGGGCAACCCAGATGAATTGGACAAGAAGAAGCACGAGATTCGCCAT GACATGCAGCGGGGCAAAACTACTATCACCGACATTACAACAGTCAATTTGGACTCCCCCGAGATGGTCGAGTCT ATTCTTAAGAATGCGGATGCCAACCGCTCGGTAGCAGCGACCAAGGCCAACGAGCGCTCATCGCGGTCCCACTCT GTCTTCATTCTCAAGCTTACCGGCCAGAACCACATCACCGGCGAACGTAGCGAAGGCACCCTAAACCTGGTTGAC TTGGCAGGAAGTGAACGTCTGAGTCACAGTGGGGCGACGGGCGAGCGTCTGAAAGAGACTCAAAACATCAACCGT AGTCTCAGCTCTCTGGGCGATGTGATTTCAGCTCTCGGCCAAGGCAAAGAGGGAGGTCACATCCCATACCGGAAC AGCAAGCTCACCTACTTGCTCCAGTTCTCCTTGGGTGGAAACTCCAAAACCCTCATGTTCGTTATGGTCAGCCCT CTCCAGGCTCATATGTCGGAGACCTTGACCAGCTTGAAGTTCGCCACGAAAGTGCACAACACCCACATTGGCACC GCAAAGCGACAGGCGCGTGTTCGTGACACCTGA |
Transcript | >Pro_DTO377G3_2|g9323.t1 ATGGACGGTGAAAACATAACCAGAACCAGGTCGTCTACTCGGACACGGCTACCACAGGCCGGCCTACGTGAAGCC AGCTCTGCGACAACCAACTCGCGCTCTGGCATCATGGCGCCAGGTACAATCGCAAACAAGGCTATCAGCACGTCG CCAACCCGTCCGAAAACCGGAAACCCGGAAATCAAGAGACCTGGATCCGTCACTCGACAGCCTAGCACCACGACC AGGGCGCATAGCCGAGGAAACTCGTACTCGTCTTCAACGATGTCCCGGCCGATTGCACCTGCATCCCGCACAGCC AACGGCTCCTTTTCCTCAACCGTCGGCCCTGGCACGCGCCCAGCATCGGCCATGTCCCGGCATCAATCGTCCTTT ATCGGCCGCAGACCCGTCGGCGCATCGATCCCCCGCGCAGCGAGCGCCTTGGATACCCATATGGAAGACGTCTCT CCCAGTGTGCTAGGAAAACGAAAGGGTATGCTACAATTTCTCTCATCTCCCAGCCGTATCCCTTCTTGCCCCGTT GGAACCGTTTCCCCCGGATTGGATGAAGGTTGGAATGGAATTAGTGAATTGGCAGCGCTCCCAGTGTCTGAGAAC CCTGTCTCTTTGCCAAAGCCTTCCAATCTAGCAACTATCCCCGTGTTGCCCAGTACCCCATTTCGGAATGTCTCC ACTGTTACCACCCCAAAGTCACCCGGATATGCGCATTCATTCTCGTCCTCTTCTTCTTATTTTACCGCTCCCACT GCACCCCCTAGAACACCATCATATTCCCAGCGGCGCATTGTCAAGAAGCCCTCCCACCCCGCATTTTTGACCAAA GGTTCTTCGATCAGAAGTTTTGACAATATCACAGGCCCGGAATGGGATCAAGCTTCTCGCGAAAAGAGTATGGAG GGATTGATGCAGACTTTTATGGCCCAGGTAAATCAACAAGGTCAAGCAAGCTCCGGTCTCAAGGAGACACTTGAG ATCTACAAGTCCAGAATCAACGAGCTCGAAGCCTCTCGGGATGAATTGAAAGAACTCAATATTACCCAGCGGGTG GAGTTAGATTCGCTGCGAAATCATCTAAGTACGGCAGAACAGGCGCGTAAAGAGGACAAGCGAGAGCATGAAATC GCTATGGATGATCTTTACCAGCGCCAGCGTATTGAATTGGATTCACTCCAGCAACAAAGCAGAAGAGAAGTCGCC ACAATCACTGACCGACATCAAGAGGAGGTTCGCGATCTGAAACGACGGTTTGACCGTGAGATTGAAGACGAGAAA GCAGCACGAGTAAGCGCGCTCGGCAAGCTGACTTCCCAATCTGCGCTTGACATTCAGAAGTCGCAAATTGAGCTA GAAAGGAAGGACCGCGAAATCACAACATTGAAGGATGGGCTACATGCCCTGAAGGCAGAGGTCGACCGCGAACGA AGGATGGTGCAAGAACTCAAACTCAACTTGGATACCACAAGTAGCAACAGTGTTACGCTAGAGTCATCAATACGT GCTCTCAAGGCACGCATCGAGTTCCTTGAAAGTGGACGGGAGGAGCAGTCTAAATCCTTTGAGCGGTGCAATCGG GAGATGATGGATGCATTTGCCGAGACAGAGGCGATAAAAGAGAAGCTGCGCAGGGAAGAGACACTTCGACGCAAA CTTCATAACCAGGTGCAAGAGCTCAAAGGCAACATCCGCGTGTTCTGCCGAGTTCGCCCCTCGCTTAAGAGTGAA CCTACTTCCGATCTCACTCTTATGCAGTATCCAGATGAAACTGATGATGGAAAGGAGATTAATATTCTTGGTCCC GAAGAGAGGACCAGCCTTGGAACAGTTACCAGGAAGAACAACACTTTCTCGTTTGATCGTGTATTCAATCCATCT ACACAGAACGCCGAGGTCTTTGATGAGATTAGCCAGCTTGTTCAGAGCGCCCTGGATGGCTACAATGTTTGCATT TTCTGTTATGGCCAAACTGGTAGTGGCAAGACACACACAATGTCATCGGCCGACGGCATGATCCCTCGTGCTGTT CACCAGATTTACGAGACCGCGCAAGGTCTGGAAGAGAAGGGTTGGCGGTACTCAATGGCAGGCAACTTTGTCGAA GTCTACAACGAAAACCTCAATGATCTGTTGGGCAACCCAGATGAATTGGACAAGAAGAAGCACGAGATTCGCCAT GACATGCAGCGGGGCAAAACTACTATCACCGACATTACAACAGTCAATTTGGACTCCCCCGAGATGGTCGAGTCT ATTCTTAAGAATGCGGATGCCAACCGCTCGGTAGCAGCGACCAAGGCCAACGAGCGCTCATCGCGGTCCCACTCT GTCTTCATTCTCAAGCTTACCGGCCAGAACCACATCACCGGCGAACGTAGCGAAGGCACCCTAAACCTGGTTGAC TTGGCAGGAAGTGAACGTCTGAGTCACAGTGGGGCGACGGGCGAGCGTCTGAAAGAGACTCAAAACATCAACCGT AGTCTCAGCTCTCTGGGCGATGTGATTTCAGCTCTCGGCCAAGGCAAAGAGGGAGGTCACATCCCATACCGGAAC AGCAAGCTCACCTACTTGCTCCAGTTCTCCTTGGGTGGAAACTCCAAAACCCTCATGTTCGTTATGGTCAGCCCT CTCCAGGCTCATATGTCGGAGACCTTGACCAGCTTGAAGTTCGCCACGAAAGTGCACAACACCCACATTGGCACC GCAAAGCGACAGGCGCGTGTTCGTGACACCTGA |
Gene | >Pro_DTO377G3_2|g9323.t1 ATGGACGGTGAAAACATAGTAAGTACCCCACTGTGGGTTTCAGTTTCATCAGAGTGCCTGCGGATATAACTGACC ATCTTCAGACCAGAACCAGGTCGTCTACTCGGACACGGCTACCACAGGCCGGCCTACGTGAAGCCAGCTCTGCGA CAACCAACTCGCGCTCTGGCATCATGGCGCCAGGTACAATCGCAAACAAGGCTATCAGCACGTCGCGTATGGAAG CCCCTGACTCGTTGGAGCAACATGAACTGACAGCACCGGAAGCAACCCGTCCGAAAACCGGAAACCCGGAAATCA AGAGACCTGGATCCGTCACTCGACAGCCTAGCACCACGACCAGGGCGCATAGCCGAGGAAACTCGTACTCGTCTT CAACGATGTCCCGGCCGATTGCACCTGCATCCCGCACAGCCAACGGCTCCTTTTCCTCAACCGTCGGCCCTGGCA CGCGCCCAGCATCGGCCATGTCCCGGCATCAATCGTCCTTTATCGGCCGCAGACCCGTCGGCGCATCGATCCCCC GCGCAGCGAGCGCCTTGGATACCCATATGGAAGACGTCTCTCCCAGTGTGCTAGGAAAACGAAAGGGTATGCTAC AATTTCTCTCATCTCCCAGCCGTATCCCTTCTTGCCCCGTTGGAACCGTTTCCCCCGGATTGGATGAAGGTTGGA ATGGAATTAGTGAATTGGCAGCGCTCCCAGTGTCTGAGAACCCTGTCTCTTTGCCAAAGCCTTCCAATCTAGCAA CTATCCCCGTGTTGCCCAGTACCCCATTTCGGAATGTCTCCACTGTTACCACCCCAAAGTCACCCGGATATGCGC ATTCATTCTCGTCCTCTTCTTCTTATTTTACCGCTCCCACTGCACCCCCTAGAACACCATCATATTCCCAGCGGC GCATTGTCAAGAAGCCCTCCCACCCCGCATTTTTGACCAAAGGTTCTTCGATCAGAAGTTTTGACAATATCACAG GCCCGGAATGGGATCAAGCTTCTCGCGAAAAGAGTATGGAGGGATTGATGCAGACTTTTATGGCCCAGGTAAATC AACAAGGTCAAGCAAGCTCCGGTCTCAAGGAGACACTTGAGATCTACAAGTCCAGAAGTAAGTTGAGTCTGATAA GGGCTATGTTGAGACGAATCTAATCCTTTCATCTAGTCAACGAGCTCGAAGCCTCTCGGGATGAATTGAAAGAAC TCAATATTACCCAGCGGGTGGAGTTAGATTCGCTGCGAAATCATCTAAGTACGGCAGAACAGGCGCGTAAAGAGG ACAAGCGAGAGCATGAAATCGCTATGGATGATCTTTACCAGCGCCAGCGTATTGAATTGGATTCACTCCAGCAAC AAAGCAGAAGAGAAGTCGCCACAATCACTGACCGACATCAAGAGGAGGTTCGCGATCTGAAACGACGGTTTGACC GTGAGATTGAAGACGAGAAAGCAGCACGAGTAAGCGCGCTCGGCAAGCTGACTTCCCAATCTGCGCTTGACATTC AGAAGTCGCAAATTGAGCTAGAAAGGAAGGACCGCGAAATCACAACATTGAAGGATGGGCTACATGCCCTGAAGG CAGAGGTCGACCGCGAACGAAGGATGGTGCAAGAACTCAAACTCAACTTGGATACCACAAGTAGCAACAGTGTTA CGCTAGAGTCATCAATACGTGCTCTCAAGGCACGCATCGAGTTCCTTGAAAGTGGACGGGAGGAGCAGTCTAAAT CCTTTGAGCGGTGCAATCGGGAGATGATGGATGCATTTGCCGAGACAGAGGCGATAAAAGAGAAGCTGCGCAGGG AAGAGACACTTCGACGCAAACTTCATAACCAGGTGCAAGAGCTCAAAGGCAACATCCGCGTGTTCTGCCGAGTTC GCCCCTCGCTTAAGAGTGAACCTACTTCCGATCTCACTCTTATGCAGTATCCAGATGAAACTGATGATGGAAAGG AGATTAATATTCTTGGTCCCGAAGAGAGGACCAGCCTTGGAACAGTTACCAGGAAGAACAACACTTTCTCGTTTG ATCGTGTATTCAATCCATCTACACAGAACGCCGAGGTCTTTGATGAGATTAGCCAGCTTGTTCAGAGCGCCCTGG ATGGCTACAATGTTTGCATTTTCTGTTATGGCCAAACTGGTAGTGGCAAGACACACACAATGTCATCGGCCGACG GCATGATCCCTCGTGCTGTTCACCAGATTTACGAGACCGCGCAAGGTCTGGAAGAGAAGGGTTGGCGGTACTCAA TGGCAGGCAACTTTGTCGAAGTCTACAACGAAAACCTCAATGATCTGTTGGGCAACCCAGATGAATTGGACAAGA AGAAGCACGAGATTCGCCATGACATGCAGCGGGGCAAAACTACTATCACCGACATTACAACAGTCAATTTGGACT CCCCCGAGATGGTCGAGTCTATTCTTAAGAATGCGGATGCCAACCGCTCGGTAGCAGCGACCAAGGCCAACGAGC GCTCATCGCGGTCCCACTCTGTCTTCATTCTCAAGCTTACCGGCCAGAACCACATCACCGGCGAACGTAGCGAAG GCACCCTAAACCTGGTTGACTTGGCAGGAAGTGAACGTCTGAGTCACAGTGGGGCGACGGGCGAGCGTCTGAAAG AGACTCAAAACATCAACCGTAGTCTCAGCTCTCTGGGCGATGTGATTTCAGCTCTCGGCCAAGGCAAAGAGGGAG GTCACATCCCATACCGGAACAGCAAGGTATGTTTTTTTCAACATTTATTTCTTCGCCAGATACTAACTTATCCTC CAGCTCACCTACTTGCTCCAGTTCTCCTTGGGTGGAAACTCCAAAACCCTCATGTTCGTTATGGTCAGCCCTCTC CAGGCTCATATGTCGGAGACCTTGACCAGCTTGAAGTTCGCCACGAAAGTGCACAACACCCACATTGGCACCGCA AAGCGACAGGCGCGTGTTCGTGACACCTGA |