Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9318.t1
Gene name
Locationscaffold_45:68958..69386
Strand+
Gene length (bp)428
Transcript length (bp)375
Coding sequence length (bp)375
Protein length (aa) 125

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 1.1E-04 64 100

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0046914 transition metal ion binding No
GO:0031323 regulation of cellular metabolic process No
GO:0046872 metal ion binding No
GO:0043167 ion binding No
GO:0051252 regulation of RNA metabolic process No
GO:0008150 biological_process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0010468 regulation of gene expression No
GO:0140110 transcription regulator activity No
GO:0050789 regulation of biological process No
GO:0005488 binding No
GO:2001141 regulation of RNA biosynthetic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0065007 biological regulation No
GO:0003674 molecular_function No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0019222 regulation of metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0080090 regulation of primary metabolic process No
GO:0043169 cation binding No
GO:0003700 DNA-binding transcription factor activity No
GO:0009889 regulation of biosynthetic process No
GO:0050794 regulation of cellular process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9318.t1
MNVLVKGEHEHREQIPRDMPTYEQMESGLCGRVSQWLWSGWRGTAFEGASPDLQKPYQLNHGDCKACREQHTTCD
HTRPQCSHCWSQQLLCFYVDPKRRKQKNIRKATFSEVETSSGLIKDTTA*
Coding >Pro_DTO377G3_2|g9318.t1
ATGAACGTTTTAGTAAAAGGAGAACATGAACACCGAGAACAGATCCCTCGTGATATGCCTACATACGAGCAGATG
GAGAGTGGACTTTGCGGTCGCGTCTCCCAGTGGCTATGGTCTGGATGGCGGGGTACGGCATTCGAAGGTGCTTCC
CCAGATTTGCAAAAGCCATACCAGCTGAATCATGGGGACTGTAAGGCCTGTCGTGAACAACATACTACCTGTGAT
CATACACGACCTCAGTGCTCTCATTGTTGGTCACAGCAGCTCTTGTGCTTCTATGTGGACCCGAAACGGAGGAAA
CAGAAAAATATTCGGAAGGCAACTTTCAGTGAAGTGGAAACGAGTTCCGGGTTGATCAAGGACACGACAGCGTGA
Transcript >Pro_DTO377G3_2|g9318.t1
ATGAACGTTTTAGTAAAAGGAGAACATGAACACCGAGAACAGATCCCTCGTGATATGCCTACATACGAGCAGATG
GAGAGTGGACTTTGCGGTCGCGTCTCCCAGTGGCTATGGTCTGGATGGCGGGGTACGGCATTCGAAGGTGCTTCC
CCAGATTTGCAAAAGCCATACCAGCTGAATCATGGGGACTGTAAGGCCTGTCGTGAACAACATACTACCTGTGAT
CATACACGACCTCAGTGCTCTCATTGTTGGTCACAGCAGCTCTTGTGCTTCTATGTGGACCCGAAACGGAGGAAA
CAGAAAAATATTCGGAAGGCAACTTTCAGTGAAGTGGAAACGAGTTCCGGGTTGATCAAGGACACGACAGCGTGA
Gene >Pro_DTO377G3_2|g9318.t1
ATGAACGTTTTAGTAAAAGGAGAACATGAACACCGGTTAGAGCTCTCATGGTTATTCAAAGGTTGGATGAAGGCT
GACAGTACTACAGAGAACAGATCCCTCGTGATATGCCTACATACGAGCAGATGGAGAGTGGACTTTGCGGTCGCG
TCTCCCAGTGGCTATGGTCTGGATGGCGGGGTACGGCATTCGAAGGTGCTTCCCCAGATTTGCAAAAGCCATACC
AGCTGAATCATGGGGACTGTAAGGCCTGTCGTGAACAACATACTACCTGTGATCATACACGACCTCAGTGCTCTC
ATTGTTGGTCACAGCAGCTCTTGTGCTTCTATGTGGACCCGAAACGGAGGAAACAGAAAAATATTCGGAAGGCAA
CTTTCAGTGAAGTGGAAACGAGTTCCGGGTTGATCAAGGACACGACAGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail