© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g9312.t1 |
| Gene name | |
| Location | scaffold_45:55400..56771 |
| Strand | - |
| Gene length (bp) | 1371 |
| Transcript length (bp) | 1194 |
| Coding sequence length (bp) | 1194 |
| Protein length (aa) | 398 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00891 | Methyltransf_2 | O-methyltransferase domain | 1.7E-17 | 178 | 374 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008171 | O-methyltransferase activity | Yes |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0008168 | methyltransferase activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g9312.t1 MTITTPFQCLVSRLGQMALKEALEPSPQAHFELLRVIDELRSAVETPTETVLRLIYQPPQNAALRVVIDLGIFAM LVEKRHRGTGLSAAQLAEYTGAERDLIVRLMRVMASLGLCVTPTPELYVANEKTVALTQPIGRDGIPCIYDLTFP TLSKLPEYLRSHGYANPQDYTQSPMQWAVGQSQFEWLSSHAQQQELFNSYMASRREGRPMWYDIYPVGRLFGHAV PYKDTVFLVDIGGNQGHDLGKFRREYGHLPGRMVLQDLPSVIEGVEAESAGIEVMGYNFMDPQPVKGARAYYFRS IFHDWDDHISRKILRNTVTAMAPDYSRILIVDFVLPDTDTPLMQASLDIQMMSIGAGVERSERQWRDLLHSAGLE ITGIWNQSPAMESVIEAVPMLK* |
| Coding | >Pro_DTO377G3_2|g9312.t1 ATGACGATCACCACACCCTTTCAATGTTTGGTCAGCCGTCTCGGCCAAATGGCTCTGAAAGAAGCCTTGGAGCCA TCGCCACAAGCCCACTTTGAGCTATTACGAGTGATCGACGAGCTGAGGTCTGCAGTGGAAACGCCGACGGAGACC GTGTTGCGTCTGATCTACCAGCCTCCTCAAAATGCTGCATTGCGCGTTGTCATTGATTTGGGAATTTTCGCCATG CTTGTGGAGAAGCGGCACAGAGGAACGGGGCTTTCAGCCGCTCAGCTGGCAGAATACACGGGCGCTGAGCGTGAT TTAATTGTCCGACTGATGCGTGTCATGGCTTCTCTTGGGCTGTGCGTCACACCGACTCCCGAGCTCTATGTTGCC AATGAGAAGACGGTGGCACTCACTCAGCCGATTGGGAGAGATGGAATCCCATGCATATATGATCTTACCTTTCCA ACCCTGAGCAAACTTCCGGAGTATCTGCGCTCCCACGGCTATGCCAATCCCCAGGATTATACTCAGTCGCCTATG CAATGGGCCGTTGGTCAGAGTCAGTTTGAGTGGCTTTCGAGTCATGCCCAGCAGCAGGAGCTCTTCAACTCGTAC ATGGCTAGTCGTCGCGAGGGTAGACCGATGTGGTACGATATATACCCCGTCGGACGACTGTTTGGCCATGCCGTG CCATACAAAGATACCGTCTTCCTAGTAGACATTGGTGGCAACCAGGGGCATGATCTGGGCAAGTTCCGCCGGGAA TATGGCCATCTGCCTGGCAGAATGGTACTGCAGGATTTACCAAGCGTGATCGAAGGGGTCGAGGCAGAGAGTGCA GGAATCGAGGTGATGGGATACAATTTCATGGATCCTCAACCGGTCAAAGGTGCCCGTGCGTACTACTTTCGCTCT ATCTTCCACGACTGGGATGACCATATCAGTCGCAAGATCCTCCGCAATACGGTGACAGCAATGGCGCCGGACTAT TCTCGGATTCTCATTGTGGATTTCGTCCTGCCAGACACCGATACGCCGCTGATGCAGGCCTCCCTAGATATTCAG ATGATGAGTATAGGAGCTGGTGTCGAGCGGTCAGAGCGACAGTGGAGAGATCTCTTGCATAGTGCCGGCCTGGAA ATCACGGGGATTTGGAACCAGAGTCCGGCGATGGAATCGGTGATTGAAGCGGTTCCAATGTTAAAATAG |
| Transcript | >Pro_DTO377G3_2|g9312.t1 ATGACGATCACCACACCCTTTCAATGTTTGGTCAGCCGTCTCGGCCAAATGGCTCTGAAAGAAGCCTTGGAGCCA TCGCCACAAGCCCACTTTGAGCTATTACGAGTGATCGACGAGCTGAGGTCTGCAGTGGAAACGCCGACGGAGACC GTGTTGCGTCTGATCTACCAGCCTCCTCAAAATGCTGCATTGCGCGTTGTCATTGATTTGGGAATTTTCGCCATG CTTGTGGAGAAGCGGCACAGAGGAACGGGGCTTTCAGCCGCTCAGCTGGCAGAATACACGGGCGCTGAGCGTGAT TTAATTGTCCGACTGATGCGTGTCATGGCTTCTCTTGGGCTGTGCGTCACACCGACTCCCGAGCTCTATGTTGCC AATGAGAAGACGGTGGCACTCACTCAGCCGATTGGGAGAGATGGAATCCCATGCATATATGATCTTACCTTTCCA ACCCTGAGCAAACTTCCGGAGTATCTGCGCTCCCACGGCTATGCCAATCCCCAGGATTATACTCAGTCGCCTATG CAATGGGCCGTTGGTCAGAGTCAGTTTGAGTGGCTTTCGAGTCATGCCCAGCAGCAGGAGCTCTTCAACTCGTAC ATGGCTAGTCGTCGCGAGGGTAGACCGATGTGGTACGATATATACCCCGTCGGACGACTGTTTGGCCATGCCGTG CCATACAAAGATACCGTCTTCCTAGTAGACATTGGTGGCAACCAGGGGCATGATCTGGGCAAGTTCCGCCGGGAA TATGGCCATCTGCCTGGCAGAATGGTACTGCAGGATTTACCAAGCGTGATCGAAGGGGTCGAGGCAGAGAGTGCA GGAATCGAGGTGATGGGATACAATTTCATGGATCCTCAACCGGTCAAAGGTGCCCGTGCGTACTACTTTCGCTCT ATCTTCCACGACTGGGATGACCATATCAGTCGCAAGATCCTCCGCAATACGGTGACAGCAATGGCGCCGGACTAT TCTCGGATTCTCATTGTGGATTTCGTCCTGCCAGACACCGATACGCCGCTGATGCAGGCCTCCCTAGATATTCAG ATGATGAGTATAGGAGCTGGTGTCGAGCGGTCAGAGCGACAGTGGAGAGATCTCTTGCATAGTGCCGGCCTGGAA ATCACGGGGATTTGGAACCAGAGTCCGGCGATGGAATCGGTGATTGAAGCGGTTCCAATGTTAAAATAG |
| Gene | >Pro_DTO377G3_2|g9312.t1 ATGACGATCACCACACCCTTTCAATGTTTGGTCAGCCGTCTCGGCCAAATGGCTCTGAAAGAAGCCTTGGAGCCA TCGCCACAAGCCCACTTTGAGCTATTACGAGTGATCGACGAGCTGAGGTCTGCAGTGGAAACGCCGACGGAGACC GTGTTGCGTCTGATCTACCAGGTGAGGCGTTCCACGGACCAAAACTGACTTCTCATTCTGACTGGACTATAGCCT CCTCAAAATGCTGCATTGCGCGTTGTCATTGATTTGGGAATTTTCGCCATGCTTGTGGAGAAGCGGCACAGAGGA ACGGGGCTTTCAGCCGCTCAGCTGGCAGAATACACGGGCGCTGAGCGTGATTTAATTGGTACTTTTTCCTGCAAT ATCATTAGTTCGTCACACATTGTGATTCGGCTAACTCCGTGAATTAGTCCGACTGATGCGTGTCATGGCTTCTCT TGGGCTGTGCGTCACACCGACTCCCGAGCTCTATGTTGCCAATGAGAAGACGGTGGCACTCACTCAGCCGATTGG GAGAGATGGAATCCCATGCATGTATGTGATGTGGCTTGGTGGCTTGCGTCTCTTCGCGCCGTTACTCACTGACCC TTGTTTAGATATGATCTTACCTTTCCAACCCTGAGCAAACTTCCGGAGTATCTGCGCTCCCACGGCTATGCCAAT CCCCAGGATTATACTCAGTCGCCTATGCAATGGGCCGTTGGTCAGAGTCAGTTTGAGTGGCTTTCGAGTCATGCC CAGCAGCAGGAGCTCTTCAACTCGTACATGGCTAGTCGTCGCGAGGGTAGACCGATGTGGTACGATATATACCCC GTCGGACGACTGTTTGGCCATGCCGTGCCATACAAAGATACCGTCTTCCTAGTAGACATTGGTGGCAACCAGGGG CATGATCTGGGCAAGTTCCGCCGGGAATATGGCCATCTGCCTGGCAGAATGGTACTGCAGGATTTACCAAGCGTG ATCGAAGGGGTCGAGGCAGAGAGTGCAGGAATCGAGGTGATGGGATACAATTTCATGGATCCTCAACCGGTCAAA GGTGCCCGTGCGTACTACTTTCGCTCTATCTTCCACGACTGGGATGACCATATCAGTCGCAAGATCCTCCGCAAT ACGGTGACAGCAATGGCGCCGGACTATTCTCGGATTCTCATTGTGGATTTCGTCCTGCCAGACACCGATACGCCG CTGATGCAGGCCTCCCTAGATATTCAGATGATGAGTATAGGAGCTGGTGTCGAGCGGTCAGAGCGACAGTGGAGA GATCTCTTGCATAGTGCCGGCCTGGAAATCACGGGGATTTGGAACCAGAGTCCGGCGATGGAATCGGTGATTGAA GCGGTTCCAATGTTAAAATAG |