Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9307.t1
Gene name
Locationscaffold_45:42003..43166
Strand+
Gene length (bp)1163
Transcript length (bp)960
Coding sequence length (bp)960
Protein length (aa) 320

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02558 ApbA Ketopantoate reductase PanE/ApbA 3.1E-35 7 156
PF08546 ApbA_C Ketopantoate reductase PanE/ApbA C terminal 1.7E-30 188 311

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 7 24 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9307.t1
MSDRIDVLVYGLGAIGSFYAFILSRSDRVRLTVVARSNYEAVQANGININSENHGQHNFRPHRVVKSIAEISPVD
YVVCAHKAINQDDVVAQLQPAIDSRTTIVIIQNGVGNEEPFRKHFPNNTIITCVTWVGVIQASPGIVTHGKSEAT
QMGLFPNPKVESQVEQQRLGTFADLLRRGKTQVQVAEDIQTYRWRKVVWNVAWNSLTALTMVDTQTWLKSSEDAT
PFTRQLMQEVINIARGCGVPLKDDLVDQLMDKINSLPGIGSSMQTDCKNGRPMEIDVILGFPVRKSRELGIQAPF
LETLYVLLRAVDGRLRAAQ*
Coding >Pro_DTO377G3_2|g9307.t1
ATGTCGGATCGAATTGATGTCCTCGTCTACGGCTTGGGAGCGATTGGCTCCTTCTATGCCTTCATCCTGAGTCGC
TCCGACCGCGTGCGACTAACGGTCGTGGCACGTTCAAATTATGAAGCTGTCCAGGCAAATGGAATCAATATCAAT
AGCGAGAATCATGGCCAGCATAACTTTCGTCCACACCGAGTGGTAAAATCAATTGCAGAGATTTCACCAGTCGAC
TATGTCGTATGCGCTCACAAAGCAATCAATCAAGATGATGTGGTAGCTCAGCTACAGCCAGCCATCGACAGCAGG
ACTACCATTGTCATCATCCAGAATGGCGTTGGTAACGAGGAACCCTTCCGAAAGCACTTCCCCAACAACACGATC
ATAACCTGTGTGACGTGGGTAGGAGTCATACAGGCAAGTCCTGGAATCGTCACGCACGGCAAATCCGAGGCTACG
CAGATGGGCTTATTTCCCAATCCCAAGGTCGAAAGCCAAGTCGAGCAACAACGCCTTGGAACATTTGCCGATCTC
CTCCGCCGTGGCAAGACTCAGGTCCAGGTTGCTGAGGATATACAGACCTATCGATGGCGGAAGGTGGTTTGGAAC
GTAGCATGGAACTCGTTGACTGCTCTCACTATGGTGGATACACAAACTTGGTTGAAGTCATCAGAAGATGCAACG
CCTTTTACACGCCAGTTGATGCAGGAGGTCATCAACATCGCCCGTGGATGTGGTGTACCCCTCAAGGATGATCTG
GTTGACCAGCTTATGGACAAAATCAATTCCTTGCCCGGCATTGGAAGCAGCATGCAGACGGATTGCAAAAATGGA
CGGCCAATGGAGATCGACGTTATCTTGGGCTTCCCAGTGCGGAAATCTCGAGAACTTGGTATACAAGCCCCCTTT
TTGGAGACCCTCTACGTTCTTCTTCGGGCGGTTGATGGTCGACTCAGGGCCGCGCAGTAG
Transcript >Pro_DTO377G3_2|g9307.t1
ATGTCGGATCGAATTGATGTCCTCGTCTACGGCTTGGGAGCGATTGGCTCCTTCTATGCCTTCATCCTGAGTCGC
TCCGACCGCGTGCGACTAACGGTCGTGGCACGTTCAAATTATGAAGCTGTCCAGGCAAATGGAATCAATATCAAT
AGCGAGAATCATGGCCAGCATAACTTTCGTCCACACCGAGTGGTAAAATCAATTGCAGAGATTTCACCAGTCGAC
TATGTCGTATGCGCTCACAAAGCAATCAATCAAGATGATGTGGTAGCTCAGCTACAGCCAGCCATCGACAGCAGG
ACTACCATTGTCATCATCCAGAATGGCGTTGGTAACGAGGAACCCTTCCGAAAGCACTTCCCCAACAACACGATC
ATAACCTGTGTGACGTGGGTAGGAGTCATACAGGCAAGTCCTGGAATCGTCACGCACGGCAAATCCGAGGCTACG
CAGATGGGCTTATTTCCCAATCCCAAGGTCGAAAGCCAAGTCGAGCAACAACGCCTTGGAACATTTGCCGATCTC
CTCCGCCGTGGCAAGACTCAGGTCCAGGTTGCTGAGGATATACAGACCTATCGATGGCGGAAGGTGGTTTGGAAC
GTAGCATGGAACTCGTTGACTGCTCTCACTATGGTGGATACACAAACTTGGTTGAAGTCATCAGAAGATGCAACG
CCTTTTACACGCCAGTTGATGCAGGAGGTCATCAACATCGCCCGTGGATGTGGTGTACCCCTCAAGGATGATCTG
GTTGACCAGCTTATGGACAAAATCAATTCCTTGCCCGGCATTGGAAGCAGCATGCAGACGGATTGCAAAAATGGA
CGGCCAATGGAGATCGACGTTATCTTGGGCTTCCCAGTGCGGAAATCTCGAGAACTTGGTATACAAGCCCCCTTT
TTGGAGACCCTCTACGTTCTTCTTCGGGCGGTTGATGGTCGACTCAGGGCCGCGCAGTAG
Gene >Pro_DTO377G3_2|g9307.t1
ATGTCGGATCGAATTGATGTCCTCGTCTACGGCTTGGGAGCGTGAGTTCAACCTCTTCATAAAAAAGATGATATA
CTAACTTCTATAGGATTGGCTCCTTCTATGCCTTCATCCTGAGTCGCTCCGACCGCGTGCGACTAACGGTCGTGG
CACGTTCAAATTATGAAGCTGTCCAGGCAAATGTGAGTGCTTACTAGACATGAGGCTATTCTAGTATTAATATCT
GGGCCCCAATAGGGAATCAATATCAATAGCGAGAATCATGGCCAGCATAACTTTCGTCCACACCGAGGTATGCGA
GATATGCACGATTAAAATCAAGCTATTTTGCTGACAAGCCAACAAGTGGTAAAATCAATTGCAGAGATTTCACCA
GTCGACTATGTCGTATGCGCTCACAAAGCAATCAATCAAGATGATGTGGTAGCTCAGCTACAGCCAGCCATCGAC
AGCAGGACTACCATTGTCATCATCCAGAATGGCGTTGGTAACGAGGAACCCTTCCGAAAGCACTTCCCCAACAAC
ACGATCATAACCTGTGTGGTGAGTTCTCTTTACATCATAATCCCAGTCTCATCTGACTTCTGCAGACGTGGGTAG
GAGTCATACAGGCAAGTCCTGGAATCGTCACGCACGGCAAATCCGAGGCTACGCAGATGGGCTTATTTCCCAATC
CCAAGGTCGAAAGCCAAGTCGAGCAACAACGCCTTGGAACATTTGCCGATCTCCTCCGCCGTGGCAAGACTCAGG
TCCAGGTTGCTGAGGATATACAGACCTATCGATGGCGGAAGGTGGTTTGGAACGTAGCATGGAACTCGTTGACTG
CTCTCACTATGGTGGATACACAAACTTGGTTGAAGTCATCAGAAGATGCAACGCCTTTTACACGCCAGTTGATGC
AGGAGGTCATCAACATCGCCCGTGGATGTGGTGTACCCCTCAAGGATGATCTGGTTGACCAGCTTATGGACAAAA
TCAATTCCTTGCCCGGCATTGGAAGCAGCATGCAGACGGATTGCAAAAATGGACGGCCAATGGAGATCGACGTTA
TCTTGGGCTTCCCAGTGCGGAAATCTCGAGAACTTGGTATACAAGCCCCCTTTTTGGAGACCCTCTACGTTCTTC
TTCGGGCGGTTGATGGTCGACTCAGGGCCGCGCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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