Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g930.t1
Gene name
Locationscaffold_01:2466314..2467497
Strand-
Gene length (bp)1183
Transcript length (bp)858
Coding sequence length (bp)858
Protein length (aa) 286

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01184 Gpr1_Fun34_YaaH GPR1/FUN34/yaaH family 6.2E-27 55 270

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0044425 membrane part No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

Domain # Start End Length
1 64 86 22
2 101 123 22
3 128 150 22
4 170 192 22
5 199 221 22
6 234 256 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g930.t1
MAKTSDSSTSEGVNFANDVQHAENGDSSAFERTRSRGSIMLSPELFEKLYLNPKPQVAGNLRSIIGNPTPIAITG
FVMALTPLSFSLMGWRGAGNNGIAHIGAYIFFGGILLLVGGLLECIIGNTFSSVVFMSFACFYLTLATTLQPFYN
AYAAYSPNPDDPTAGLTSEGFNASFGFFIVCFNLLCFFYLICSFRTNFVLVYILFTVVIGVGLINAAYWYLAMQE
TVLAGKFQIGGGAVLFAACLGGWYLLFSLLLESVDFPLRLPVGDLSSHVPGLSQLQKKSD*
Coding >Pro_DTO377G3_2|g930.t1
ATGGCTAAAACATCTGATTCGAGCACTTCCGAGGGCGTGAACTTTGCCAACGACGTTCAGCATGCGGAAAATGGA
GACTCTAGTGCCTTTGAGAGGACCAGGTCTAGAGGAAGCATCATGCTATCTCCGGAACTCTTTGAGAAGCTTTAC
TTGAATCCGAAACCTCAAGTTGCTGGAAACCTTCGGAGTATCATTGGCAATCCAACCCCTATAGCCATCACAGGA
TTCGTCATGGCCTTGACTCCTCTCTCTTTTTCCCTCATGGGCTGGAGAGGAGCTGGCAACAATGGAATTGCTCAT
ATTGGAGCATACATCTTCTTCGGAGGCATTCTCTTGCTTGTTGGTGGATTGCTAGAGTGTATAATCGGTAACACC
TTCTCATCCGTGGTGTTCATGTCCTTTGCATGCTTCTACCTCACCCTCGCCACGACCCTACAGCCCTTCTACAAT
GCCTACGCAGCCTATTCACCAAACCCTGATGATCCCACTGCAGGACTCACATCGGAGGGTTTCAATGCCAGCTTT
GGATTTTTCATAGTTTGTTTCAATCTTCTATGCTTCTTTTACTTGATCTGCTCCTTCCGGACCAATTTTGTCCTT
GTCTATATCCTTTTCACCGTGGTTATTGGAGTTGGCCTCATCAATGCTGCCTACTGGTACTTGGCTATGCAGGAG
ACAGTACTTGCTGGGAAGTTCCAAATAGGCGGAGGAGCTGTGCTATTCGCAGCATGCCTCGGTGGATGGTATTTA
CTCTTTTCTTTGTTGCTTGAATCCGTCGATTTCCCTCTGCGGCTTCCCGTGGGTGATCTCTCTAGCCATGTCCCG
GGACTATCGCAACTTCAGAAGAAGTCGGATTGA
Transcript >Pro_DTO377G3_2|g930.t1
ATGGCTAAAACATCTGATTCGAGCACTTCCGAGGGCGTGAACTTTGCCAACGACGTTCAGCATGCGGAAAATGGA
GACTCTAGTGCCTTTGAGAGGACCAGGTCTAGAGGAAGCATCATGCTATCTCCGGAACTCTTTGAGAAGCTTTAC
TTGAATCCGAAACCTCAAGTTGCTGGAAACCTTCGGAGTATCATTGGCAATCCAACCCCTATAGCCATCACAGGA
TTCGTCATGGCCTTGACTCCTCTCTCTTTTTCCCTCATGGGCTGGAGAGGAGCTGGCAACAATGGAATTGCTCAT
ATTGGAGCATACATCTTCTTCGGAGGCATTCTCTTGCTTGTTGGTGGATTGCTAGAGTGTATAATCGGTAACACC
TTCTCATCCGTGGTGTTCATGTCCTTTGCATGCTTCTACCTCACCCTCGCCACGACCCTACAGCCCTTCTACAAT
GCCTACGCAGCCTATTCACCAAACCCTGATGATCCCACTGCAGGACTCACATCGGAGGGTTTCAATGCCAGCTTT
GGATTTTTCATAGTTTGTTTCAATCTTCTATGCTTCTTTTACTTGATCTGCTCCTTCCGGACCAATTTTGTCCTT
GTCTATATCCTTTTCACCGTGGTTATTGGAGTTGGCCTCATCAATGCTGCCTACTGGTACTTGGCTATGCAGGAG
ACAGTACTTGCTGGGAAGTTCCAAATAGGCGGAGGAGCTGTGCTATTCGCAGCATGCCTCGGTGGATGGTATTTA
CTCTTTTCTTTGTTGCTTGAATCCGTCGATTTCCCTCTGCGGCTTCCCGTGGGTGATCTCTCTAGCCATGTCCCG
GGACTATCGCAACTTCAGAAGAAGTCGGATTGA
Gene >Pro_DTO377G3_2|g930.t1
ATGGCTAAAACATCTGATTCGAGCACTTCCGAGGGCGTGAACTTTGCCAACGACGTTCAGCATGCGGAAAATGGA
GACTCTAGTGCCTTTGAGAGGACCAGGTCTAGAGGAAGCATCATGCTATCTCCGGAACTCTTTGAGAAGCTTTAC
TTGAATCCGAAACCTCAAGTTGCTGGAAACCTTCGGAGTATCATTGGCAATCCAACCCCTATGTATGGCAGCTGT
GTTCCGATCACCCCTCCTAGGAAATAACTGACACCAGCGTAGAGCCATCACAGGATTCGTCATGGCCTTGACTCC
TCTCTCTTTTTCCCTCATGGGCTGGAGAGGAGCTGGCAACAATGGAATTGCTCATATGTGAGTAGTTGGAATCAG
TCTGATTCCATATTCAGGGGCGCATGCTAACTCGCTATTCTTTCAGTGGAGCATACATCTTCTTCGGAGGCATTC
TCTTGCTTGTTGGTGGATTGCTAGAGTGTATAATCGGTAACACCTTCTCATCCGTGGTGTTCATGTCCTTTGGTA
AGTGATACTGTGCTCGTGGCCTATCCAAATATATGTCAAATACTAATGACATCAATGATGCAGCATGCTTCTACC
TCACCCTCGCCACGACCCTACAGCCCTTCTACAATGCCTACGCAGCCTATTCACCAAACCCTGATGATCCCACTG
CAGGACTCACATCGGAGGGTTTCAATGCCAGCTTTGGTTAGTCAACCACCGCATTCTTCCGACCTTGCTTTTTGA
GCAAAGCGTGAACAAGATTCTAACGATCAAATGGTATACAGGATTTTTCATAGTTTGTTTCAATCTTCTATGCTT
CTTTTACTTGATCTGCTCCTTCCGGACCAATTTTGTCCTTGTCTATATCCTTTTCACCGTGGTTATTGGAGTTGG
CCTCATCAATGCTGCCTACTGGTACTTGGCTATGCAGGAGACAGTACTTGCTGGGAAGTTCCAAATAGTGAGTCC
CCTAGCGGTATCTTTAATTTTCTCGTTACTGACGCAATCGATCTCATTTCAGGGCGGAGGAGCTGTGCTATTCGC
AGCATGCCTCGGTGGATGGTATTTACTCTTTTCTTTGTTGCTTGAATCCGTCGATTTCCCTCTGCGGCTTCCCGT
GGGTGATCTCTCTAGCCATGTCCCGGGACTATCGCAACTTCAGAAGAAGTCGGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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