Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g93.t1
Gene name
Locationscaffold_01:232965..233891
Strand+
Gene length (bp)926
Transcript length (bp)780
Coding sequence length (bp)780
Protein length (aa) 260

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13430 DUF4112 Domain of unknown function (DUF4112) 1.1E-33 64 167

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

Domain # Start End Length
1 76 98 22
2 130 152 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g93.t1
MSKILVSLISKKVLGETANNHFGTEDPYFEEVPASRLGRTFGKKTQKRRKAIPPGLSEHDAKVLTKVKRRAYQLD
YALFSLCGIRFGWGSVIGLIPFIGDIGDAALAMMVVKSCEGIEGGLPAALRMKMLINVILDFVLGLVPFIGDLAD
AVYKANTRNAVILETHLRQKGAKAASRQGERRQDRVVEVDNSLPDTFDRQEDGVVGGRPPAYDDVRPSGHGGRGN
DAPQPAKQSRNKSFGRWFGGADHPEHDLERGGAR*
Coding >Pro_DTO377G3_2|g93.t1
ATGTCGAAAATTCTAGTGTCTCTGATTAGCAAAAAGGTGCTAGGTGAAACCGCCAATAATCATTTCGGTACTGAG
GACCCCTACTTCGAAGAAGTTCCTGCTTCACGCCTTGGTCGTACATTTGGAAAAAAGACTCAAAAGCGTCGCAAG
GCCATCCCGCCGGGGCTCTCTGAGCATGATGCCAAGGTCCTGACCAAGGTCAAACGCAGAGCTTACCAGCTGGAC
TATGCTCTTTTCAGCTTGTGCGGAATCCGCTTCGGCTGGGGAAGTGTGATTGGACTAATTCCATTCATTGGCGAT
ATTGGCGACGCTGCGCTCGCGATGATGGTTGTGAAATCTTGCGAAGGAATTGAAGGTGGACTTCCTGCTGCTTTG
CGCATGAAGATGTTGATCAATGTGATTCTCGACTTCGTCCTTGGCCTCGTCCCCTTCATTGGTGATCTTGCCGAT
GCAGTGTACAAAGCGAATACCCGAAATGCAGTCATTCTCGAAACTCATCTGCGCCAAAAGGGTGCCAAGGCGGCC
TCGCGGCAGGGCGAAAGAAGGCAGGACCGAGTAGTGGAAGTCGACAATAGTCTTCCCGATACATTTGACAGACAA
GAAGATGGAGTCGTGGGTGGCCGTCCACCGGCCTATGACGATGTGCGACCTTCAGGTCATGGGGGAAGGGGTAAC
GATGCCCCCCAGCCGGCCAAACAGTCCCGGAACAAGTCATTTGGCAGATGGTTCGGCGGTGCGGATCATCCAGAA
CATGATTTGGAGCGAGGTGGAGCAAGGTAA
Transcript >Pro_DTO377G3_2|g93.t1
ATGTCGAAAATTCTAGTGTCTCTGATTAGCAAAAAGGTGCTAGGTGAAACCGCCAATAATCATTTCGGTACTGAG
GACCCCTACTTCGAAGAAGTTCCTGCTTCACGCCTTGGTCGTACATTTGGAAAAAAGACTCAAAAGCGTCGCAAG
GCCATCCCGCCGGGGCTCTCTGAGCATGATGCCAAGGTCCTGACCAAGGTCAAACGCAGAGCTTACCAGCTGGAC
TATGCTCTTTTCAGCTTGTGCGGAATCCGCTTCGGCTGGGGAAGTGTGATTGGACTAATTCCATTCATTGGCGAT
ATTGGCGACGCTGCGCTCGCGATGATGGTTGTGAAATCTTGCGAAGGAATTGAAGGTGGACTTCCTGCTGCTTTG
CGCATGAAGATGTTGATCAATGTGATTCTCGACTTCGTCCTTGGCCTCGTCCCCTTCATTGGTGATCTTGCCGAT
GCAGTGTACAAAGCGAATACCCGAAATGCAGTCATTCTCGAAACTCATCTGCGCCAAAAGGGTGCCAAGGCGGCC
TCGCGGCAGGGCGAAAGAAGGCAGGACCGAGTAGTGGAAGTCGACAATAGTCTTCCCGATACATTTGACAGACAA
GAAGATGGAGTCGTGGGTGGCCGTCCACCGGCCTATGACGATGTGCGACCTTCAGGTCATGGGGGAAGGGGTAAC
GATGCCCCCCAGCCGGCCAAACAGTCCCGGAACAAGTCATTTGGCAGATGGTTCGGCGGTGCGGATCATCCAGAA
CATGATTTGGAGCGAGGTGGAGCAAGGTAA
Gene >Pro_DTO377G3_2|g93.t1
ATGTCGAAAATTCTAGTGTCTCTGATTAGCAAAAAGGTGCTAGGTGAAACCGCCAATAATCATTTCGGTACTGAG
GTGAGTCCACTTGACCGACCGACATTCATTTGGTTTTGCGAAGGGAGGTCAGGCTAACCCAATATTTTCTATCTG
CCCAGGACCCCTACTTCGAAGAAGTTCCTGCTTCACGCCTTGGTCGTACATTTGGAAAAAAGACTCAAAAGCGTC
GCAAGGCCATCCCGCCGGGGCTCTCTGAGCATGATGCCAAGGTCCTGACCAAGGTCAAACGCAGAGCTTACCAGC
TGGACTATGCTCTTTTCAGCTTGTGCGGAATCCGCTTCGGCTGGGGAAGTGTGATTGGACTAATTCCATTGTGAG
TTTCACCAGGATCTATCACACTAGCACCGGGAGGAGACCAATTCTAACAAATGAACAACAGCATTGGCGATATTG
GCGACGCTGCGCTCGCGATGATGGTTGTGAAATCTTGCGAAGGAATTGAAGGTGGACTTCCTGCTGCTTTGCGCA
TGAAGATGTTGATCAATGTGATTCTCGACTTCGTCCTTGGCCTCGTCCCCTTCATTGGTGATCTTGCCGATGCAG
TGTACAAAGCGAATACCCGAAATGCAGTCATTCTCGAAACTCATCTGCGCCAAAAGGGTGCCAAGGCGGCCTCGC
GGCAGGGCGAAAGAAGGCAGGACCGAGTAGTGGAAGTCGACAATAGTCTTCCCGATACATTTGACAGACAAGAAG
ATGGAGTCGTGGGTGGCCGTCCACCGGCCTATGACGATGTGCGACCTTCAGGTCATGGGGGAAGGGGTAACGATG
CCCCCCAGCCGGCCAAACAGTCCCGGAACAAGTCATTTGGCAGATGGTTCGGCGGTGCGGATCATCCAGAACATG
ATTTGGAGCGAGGTGGAGCAAGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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