Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9273.t1
Gene name
Locationscaffold_44:97837..98710
Strand+
Gene length (bp)873
Transcript length (bp)585
Coding sequence length (bp)585
Protein length (aa) 195

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00036 EF-hand_1 EF hand 1.9E-07 156 181
PF13499 EF-hand_7 EF-hand domain pair 1.2E-12 113 180
PF13202 EF-hand_5 EF hand 3.5E-04 46 68
PF13202 EF-hand_5 EF hand 2.0E-02 118 135
PF13202 EF-hand_5 EF hand 8.6E-06 157 179
PF13833 EF-hand_8 EF-hand domain pair 1.7E-04 90 135
PF13833 EF-hand_8 EF-hand domain pair 4.1E-04 160 182

GO

GO Term Description Terminal node
GO:0005509 calcium ion binding Yes
GO:0043169 cation binding No
GO:0046872 metal ion binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9273.t1
MEPSTNEPNAAAIYDARRRRGSVGTTQLFDNIVSTSNFNRDEVDRLRKRFMKLDKNANGTIDRDEFLSLPQVSSN
PLATRMIAIFDEDGGGDVDFQEFVTGLSAFSSKGNKQEKLRFAFKVYDIDRDGYISNGELFIVLKMMVGNNLKDV
QLQQIVDKTIMEADKDQDGKISFEEFTDMVENTDVSISMTLNQI*
Coding >Pro_DTO377G3_2|g9273.t1
ATGGAGCCCTCCACCAACGAGCCCAACGCTGCTGCGATTTACGATGCGCGGAGACGCCGCGGCTCCGTGGGTACC
ACCCAGCTCTTCGATAACATTGTGTCTACATCCAACTTCAACCGGGATGAGGTGGATCGCCTGCGCAAGCGCTTC
ATGAAGCTGGATAAGAATGCCAACGGCACTATCGACCGTGATGAATTCCTCTCCCTTCCCCAAGTGTCGTCCAAC
CCACTCGCCACGAGGATGATCGCCATCTTCGACGAAGACGGTGGCGGTGACGTCGACTTCCAGGAATTCGTGACG
GGCCTGTCGGCATTCAGCTCAAAGGGTAACAAGCAAGAGAAACTGCGATTCGCATTCAAGGTGTACGACATTGAC
CGTGACGGTTACATTTCCAACGGCGAGCTCTTCATTGTGCTGAAGATGATGGTCGGCAATAACCTCAAGGACGTG
CAGCTGCAGCAGATCGTCGACAAGACGATTATGGAGGCCGATAAGGATCAGGATGGAAAGATTAGCTTCGAGGAG
TTCACGGATATGGTGGAGAACACAGACGTGAGCATCAGTATGACACTGAATCAAATATGA
Transcript >Pro_DTO377G3_2|g9273.t1
ATGGAGCCCTCCACCAACGAGCCCAACGCTGCTGCGATTTACGATGCGCGGAGACGCCGCGGCTCCGTGGGTACC
ACCCAGCTCTTCGATAACATTGTGTCTACATCCAACTTCAACCGGGATGAGGTGGATCGCCTGCGCAAGCGCTTC
ATGAAGCTGGATAAGAATGCCAACGGCACTATCGACCGTGATGAATTCCTCTCCCTTCCCCAAGTGTCGTCCAAC
CCACTCGCCACGAGGATGATCGCCATCTTCGACGAAGACGGTGGCGGTGACGTCGACTTCCAGGAATTCGTGACG
GGCCTGTCGGCATTCAGCTCAAAGGGTAACAAGCAAGAGAAACTGCGATTCGCATTCAAGGTGTACGACATTGAC
CGTGACGGTTACATTTCCAACGGCGAGCTCTTCATTGTGCTGAAGATGATGGTCGGCAATAACCTCAAGGACGTG
CAGCTGCAGCAGATCGTCGACAAGACGATTATGGAGGCCGATAAGGATCAGGATGGAAAGATTAGCTTCGAGGAG
TTCACGGATATGGTGGAGAACACAGACGTGAGCATCAGTATGACACTGAATCAAATATGA
Gene >Pro_DTO377G3_2|g9273.t1
ATGGAGCCCTCCACCAACGAGCCCAACGCTGCTGCGATTTACGATGCGCGGAGACGCCGCGGCTCCGTGGGTACC
ACCCAGCTCTTCGATAACATTGTGTCTACATCCAACTGTATGTTTTCCCCGGTCGGATAGGGTATGAAGGCGATG
AATCGGGCTTGTGGCTGACTTCGCGACCACAGTCAACCGGGATGAGGTGGATCGCCTGCGCAAGCGCTTCATGAA
GCTGGATAAGGTCAGTTGCGTCGCGCGGATTATGAGAATATGCTCTAACATACTCAACAATCTACAGAATGCCAA
CGGCACTATCGACCGTGATGAATTCCTCTCCCTTCCCCAAGTGTCGTCCAACCCACTCGCCACGAGGTTCGTTGC
TCCCTGGGCATCCACATCCAAACTCCAAACTCCCACCTACGATCTGCGATCTACATATATACACGGACTAGTCCC
TGACCCAACTGTTTTATGCTAGGATGATCGCCATCTTCGACGAAGACGGTGGCGGTGACGTCGACTTCCAGGAAT
TCGTGACGGGCCTGTCGGCATTCAGCTCAAAGGGTAACAAGCAAGAGAAACTGCGATTCGCATTCAAGGTGTACG
ACATTGACCGTGACGGTTACATTTCCAACGGCGAGCTCTTCATTGTGCTGAAGATGATGGTCGGCAATAACCTCA
AGGACGTGCAGCTGCAGCAGATCGTCGACAAGACGATTATGGAGGCCGATAAGGATCAGGATGGAAAGATTAGCT
TCGAGGAGTTCACGGATATGGTGGAGAACACAGACGTGAGCATCAGTATGACACTGAGTATGTTTTGATCCGGGT
TTTCTTATTGGAGGTCTTCGTGCTAACTATGGTCCAGATCAAATATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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