Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9269.t1
Gene name
Locationscaffold_44:89816..91282
Strand+
Gene length (bp)1466
Transcript length (bp)1365
Coding sequence length (bp)1365
Protein length (aa) 455

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16561 AMPK1_CBM Glycogen recognition site of AMP-activated protein kinase 2.7E-28 216 301
PF04739 AMPKBI 5'-AMP-activated protein kinase beta subunit, interaction domain 2.6E-24 380 448

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 46 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9269.t1
MGNNPSKGPVGDAPSAHAHHSSTSDRKVARRSSLNTISAPKTTVADPSATKETAAGHSAGFQGSVQERLQSRNVP
ESSPKNIEKASPQDVRRAEPSAVKDIPSRDHSNPVQVPISRNVPGRDPVAPSAPLLNSYYSASAHLQHPPRLPLP
IGDANTTPGSPVAGPEDSHIQSMPADRLLDERMDPSTLASGHTTIEEEELLDELQPYTISGAGKAVPVLIEWTAP
GQKVYVTGTFVNWEKKFRLHRSEKNPSVMSTTLNLRPGTHHLKFIVDGTMRAADSLPTAVDFTNHLVNYIEVSAD
DAHDKDSAVPAGAQTPNTVPDASKQVVGHTEDHPLEKEETEEEVPPGDFGDAIPQFLADLDKEEDSPAYFQAANV
IGDTATPPSLPLFLGKSILNGTTPMKDDSSVLNYPNHTVLNHLATSSIKNGVLATSATTRYKRKYVTTILYKPTG
DVTE*
Coding >Pro_DTO377G3_2|g9269.t1
ATGGGCAACAACCCTTCCAAAGGCCCGGTGGGCGACGCGCCGTCTGCCCATGCCCACCACAGCTCTACAAGCGAT
CGAAAAGTCGCCCGTCGATCCTCTCTCAACACGATCTCGGCCCCGAAGACCACCGTGGCCGATCCTTCGGCCACA
AAGGAGACAGCTGCTGGGCACTCGGCAGGATTTCAAGGATCCGTGCAAGAACGTCTACAATCCCGAAACGTCCCT
GAATCTTCGCCCAAAAACATAGAGAAGGCTTCGCCACAAGACGTACGTCGAGCTGAGCCCTCCGCGGTCAAGGAC
ATCCCATCCCGCGACCACTCCAACCCGGTCCAAGTCCCGATCTCGCGCAATGTCCCGGGGCGCGATCCTGTGGCA
CCATCGGCCCCGCTCCTCAATTCGTACTATAGCGCATCGGCCCACCTACAACATCCACCACGCCTGCCATTGCCA
ATTGGCGATGCCAACACCACGCCCGGATCGCCTGTCGCCGGCCCCGAGGACTCGCATATCCAGTCGATGCCAGCG
GATCGCCTCTTAGACGAACGGATGGATCCGAGCACTCTGGCTTCAGGTCATACAACCATTGAAGAGGAGGAGTTG
CTTGATGAGCTCCAGCCATACACCATCAGTGGTGCGGGCAAGGCCGTCCCGGTCCTTATTGAATGGACAGCGCCT
GGTCAGAAGGTCTACGTCACTGGAACTTTTGTTAACTGGGAGAAGAAGTTCCGTCTGCACAGAAGTGAAAAAAAT
CCGTCCGTCATGTCTACTACTCTGAACCTTCGACCTGGCACGCACCACTTGAAATTCATTGTCGATGGAACAATG
CGCGCTGCGGATAGTCTTCCGACTGCCGTCGACTTTACTAATCATCTGGTCAACTACATTGAAGTCAGTGCAGAT
GATGCTCATGACAAGGACTCGGCCGTTCCAGCGGGAGCTCAAACTCCAAACACGGTGCCAGATGCCTCTAAGCAG
GTTGTAGGACATACCGAAGACCACCCTCTAGAAAAGGAAGAAACCGAGGAAGAGGTGCCACCCGGTGATTTCGGT
GATGCCATTCCTCAATTCTTGGCCGACCTGGACAAGGAAGAAGATAGCCCGGCCTATTTCCAGGCCGCCAATGTC
ATCGGAGATACGGCTACCCCTCCCAGTCTGCCTCTCTTCTTGGGTAAGTCAATTCTCAACGGCACGACTCCCATG
AAAGACGATAGCAGTGTTTTGAACTATCCGAACCACACTGTCCTCAATCACCTTGCCACGAGCAGTATCAAGAAC
GGTGTCCTGGCTACAAGCGCGACAACCAGGTATAAAAGAAAATATGTCACGACTATTTTGTACAAACCGACTGGC
GATGTCACAGAATGA
Transcript >Pro_DTO377G3_2|g9269.t1
ATGGGCAACAACCCTTCCAAAGGCCCGGTGGGCGACGCGCCGTCTGCCCATGCCCACCACAGCTCTACAAGCGAT
CGAAAAGTCGCCCGTCGATCCTCTCTCAACACGATCTCGGCCCCGAAGACCACCGTGGCCGATCCTTCGGCCACA
AAGGAGACAGCTGCTGGGCACTCGGCAGGATTTCAAGGATCCGTGCAAGAACGTCTACAATCCCGAAACGTCCCT
GAATCTTCGCCCAAAAACATAGAGAAGGCTTCGCCACAAGACGTACGTCGAGCTGAGCCCTCCGCGGTCAAGGAC
ATCCCATCCCGCGACCACTCCAACCCGGTCCAAGTCCCGATCTCGCGCAATGTCCCGGGGCGCGATCCTGTGGCA
CCATCGGCCCCGCTCCTCAATTCGTACTATAGCGCATCGGCCCACCTACAACATCCACCACGCCTGCCATTGCCA
ATTGGCGATGCCAACACCACGCCCGGATCGCCTGTCGCCGGCCCCGAGGACTCGCATATCCAGTCGATGCCAGCG
GATCGCCTCTTAGACGAACGGATGGATCCGAGCACTCTGGCTTCAGGTCATACAACCATTGAAGAGGAGGAGTTG
CTTGATGAGCTCCAGCCATACACCATCAGTGGTGCGGGCAAGGCCGTCCCGGTCCTTATTGAATGGACAGCGCCT
GGTCAGAAGGTCTACGTCACTGGAACTTTTGTTAACTGGGAGAAGAAGTTCCGTCTGCACAGAAGTGAAAAAAAT
CCGTCCGTCATGTCTACTACTCTGAACCTTCGACCTGGCACGCACCACTTGAAATTCATTGTCGATGGAACAATG
CGCGCTGCGGATAGTCTTCCGACTGCCGTCGACTTTACTAATCATCTGGTCAACTACATTGAAGTCAGTGCAGAT
GATGCTCATGACAAGGACTCGGCCGTTCCAGCGGGAGCTCAAACTCCAAACACGGTGCCAGATGCCTCTAAGCAG
GTTGTAGGACATACCGAAGACCACCCTCTAGAAAAGGAAGAAACCGAGGAAGAGGTGCCACCCGGTGATTTCGGT
GATGCCATTCCTCAATTCTTGGCCGACCTGGACAAGGAAGAAGATAGCCCGGCCTATTTCCAGGCCGCCAATGTC
ATCGGAGATACGGCTACCCCTCCCAGTCTGCCTCTCTTCTTGGGTAAGTCAATTCTCAACGGCACGACTCCCATG
AAAGACGATAGCAGTGTTTTGAACTATCCGAACCACACTGTCCTCAATCACCTTGCCACGAGCAGTATCAAGAAC
GGTGTCCTGGCTACAAGCGCGACAACCAGGTATAAAAGAAAATATGTCACGACTATTTTGTACAAACCGACTGGC
GATGTCACAGAATGA
Gene >Pro_DTO377G3_2|g9269.t1
ATGGGCAACAACCCTTCCAAAGGCCCGGTGGGCGACGCGCCGTCTGCCCATGCCCACCACAGCTCTACAAGCGAT
CGAAAAGTCGCCCGTCGATCCTCTCTCAACACGATCTCGGCCCCGAAGACCACCGTGGCCGATCCTTCGGCCACA
AAGGAGACAGCTGCTGGGCACTCGGCAGGATTTCAAGGATCCGTGCAAGAACGTCTACAATCCCGAAACGTCCCT
GAATCTTCGCCCAAAAACATAGAGAAGGCTTCGCCACAAGACGTACGTCGAGCTGAGCCCTCCGCGGTCAAGGAC
ATCCCATCCCGCGACCACTCCAACCCGGTCCAAGTCCCGATCTCGCGCAATGTCCCGGGGCGCGATCCTGTGGCA
CCATCGGCCCCGCTCCTCAATTCGTACTATAGCGCATCGGCCCACCTACAACATCCACCACGCCTGCCATTGCCA
ATTGGCGATGCCAACACCACGCCCGGATCGCCTGTCGCCGGCCCCGAGGACTCGCATATCCAGTCGATGCCAGCG
GATCGCCTCTTAGACGAACGGATGGATCCGAGCACTCTGGCTTCAGGTCATACAACCATTGAAGAGGAGGAGTTG
CTTGATGAGCTCCAGCCATACACCATCAGTGGTGCGGGCAAGGCCGTCCCGGTCCTTATTGAATGGACAGCGCCT
GGTCAGAAGGTCTACGTCACTGGAACTTTTGTTAACTGGGAGAAGAAGTTCCGTCTGCACAGAAGGTTGGTCAAA
TGATGAGGCTAGGATTTCCGGGACTTGACTAACACTCGATAGTGAAAAAAATCCGTCCGTCATGTCTACTACTCT
GAACCTTCGACCTGGCACGCACCACTTGAAATTCATTGTCGATGGAACAATGCGCGCTGCGGATAGTCTTCCGAC
TGCCGTCGACTTTACTAATCATCTGGTCAACTACATTGAAGTCAGTGCAGATGATGCTCATGACAAGGACTCGGC
CGTTCCAGCGGGAGCTCAAACTCCAAACACGGTGCCAGATGCCTCTAAGCAGGTTGTAGGACATACCGAAGACCA
CCCTCTAGAAAAGGAAGAAACCGAGGAAGAGGTGCCACCCGGTGATTTCGGTGATGCCATTCCTCAATTCTTGGC
CGACCTGGACAAGGAAGAAGATAGCCCGGCCTATTTCCAGGCCGCCAATGTCATCGGAGATACGGCTACCCCTCC
CAGTCTGCCTCTCTTCTTGGGTAAGTCAATTCTCAACGGCACGACTCCCATGAAAGACGATAGCAGTGTTTTGAA
CTATCCGAACCACACTGTCCTCAATCACCTTGCCACGAGCAGTATCAAGAACGGTGTCCTGGCTACAAGCGCGAC
AACCAGGTATAAAAGAAAAGTAAGTCACTGCTCTATACACCTTTGTGGATTAACTAATCTGTCTGCAGTATGTCA
CGACTATTTTGTACAAACCGACTGGCGATGTCACAGAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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