Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9241.t1
Gene name
Locationscaffold_44:29022..29604
Strand+
Gene length (bp)582
Transcript length (bp)387
Coding sequence length (bp)387
Protein length (aa) 129

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04133 Vps55 Vacuolar protein sorting 55 1.1E-45 8 126

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 33 50 17
3 71 90 19
4 100 122 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9241.t1
MAAGLKTIIALSFVLAIGFLLVILSSALWHRYWPLLVVGIYVVAPLPNWICQRCANPDDFMDSSSNSAMDFGRFM
TGFLVLTGIALPVVLAHSGAIEIPAMIMSIFGGLLIYGTIISFSMFFQEQEEF*
Coding >Pro_DTO377G3_2|g9241.t1
ATGGCCGCTGGACTCAAGACCATCATCGCCCTGTCCTTTGTTCTCGCAATTGGTTTCCTCCTCGTTATCCTCTCT
TCCGCGCTATGGCACAGGTACTGGCCGCTGCTGGTGGTCGGCATTTACGTTGTTGCGCCGCTTCCCAACTGGATC
TGCCAACGATGCGCAAACCCAGATGATTTTATGGACAGTTCGAGCAACTCTGCGATGGACTTTGGACGGTTCATG
ACCGGATTCTTGGTTCTTACTGGTATCGCACTTCCTGTCGTCCTCGCCCACAGCGGCGCAATCGAGATCCCAGCA
ATGATCATGTCGATTTTCGGAGGCTTGTTGATCTATGGCACCATTATTAGCTTCTCGATGTTCTTCCAGGAACAG
GAGGAGTTCTGA
Transcript >Pro_DTO377G3_2|g9241.t1
ATGGCCGCTGGACTCAAGACCATCATCGCCCTGTCCTTTGTTCTCGCAATTGGTTTCCTCCTCGTTATCCTCTCT
TCCGCGCTATGGCACAGGTACTGGCCGCTGCTGGTGGTCGGCATTTACGTTGTTGCGCCGCTTCCCAACTGGATC
TGCCAACGATGCGCAAACCCAGATGATTTTATGGACAGTTCGAGCAACTCTGCGATGGACTTTGGACGGTTCATG
ACCGGATTCTTGGTTCTTACTGGTATCGCACTTCCTGTCGTCCTCGCCCACAGCGGCGCAATCGAGATCCCAGCA
ATGATCATGTCGATTTTCGGAGGCTTGTTGATCTATGGCACCATTATTAGCTTCTCGATGTTCTTCCAGGAACAG
GAGGAGTTCTGA
Gene >Pro_DTO377G3_2|g9241.t1
ATGGCCGCTGGACTCAAGACCATCATCGCCCTGTCCTTTGTATGCTTCGTTTCGCTGTTCGCCTAGCATCTGAAT
ATTCTCTAACTTTTGACCAGGTTCTCGCAATTGGTTTCCTCCTCGTTATCCTCTCTTCCGCGCTATGGCACAGGT
ACTGGCCGCTGCTGGTGGTCGGCATTTACGTTGTTGCGCCGCTTCCCAACTGGATCTGCCAACGATGCGCAAACC
CAGATGATTTTATGGACAGTTCGAGCAACTCTGCGATGGACTTTGGACGGTTCATGACCGGATTCTTGGTTCTTA
CTGGTATCGGTACGTCGTTGGTTAACAACAACCCCTCTTGTGGGACATATCATCACTCGACCGGTCGGTTCTTGA
TGTTCAGGCCGCACTATGTCCATTTTAATGCCTCATCATTGTGCCATTGATGATTATCAACTGACCTGTCTAGCA
CTTCCTGTCGTCCTCGCCCACAGCGGCGCAATCGAGATCCCAGCAATGATCATGTCGATTTTCGGAGGCTTGTTG
ATCTATGGCACCATTATTAGCTTCTCGATGTTCTTCCAGGAACAGGAGGAGTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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