Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9230.t1
Gene name
Locationscaffold_43:145877..147089
Strand-
Gene length (bp)1212
Transcript length (bp)891
Coding sequence length (bp)891
Protein length (aa) 297

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07335 Glyco_hydro_75 Fungal chitosanase of glycosyl hydrolase group 75 6.9E-42 99 242

GO

GO Term Description Terminal node
GO:0016977 chitosanase activity Yes
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9230.t1
MIYSRSIPFVLFALFGTGLTQSVNGFNFNKPTGGPPGSYFAAGSSIPVTALQSAAATASTAVPDGTYPINRENGA
QEVTIHSDWANFNQGAAYVWIADMDVDCDGIDYMCKEDADGLNQTNFGALAAYEVPFFVIPDRFGTQYAKQLPGN
NIGAVICDGKMFYGVYGDSNGATPQVIGEASWLMARTCFPNDNLNGNNGHGDADVTYIIFTGNNSVLPSSALNTS
YVTNFSILRSMGDRLVTSLAQNLGLPYWRLLSEKKIVLVPLARPSMAVKWSGKVGNARMSDCDLVAMGDLI*
Coding >Pro_DTO377G3_2|g9230.t1
ATGATCTATAGCCGCTCGATTCCCTTTGTCCTTTTTGCCTTGTTTGGCACAGGACTCACGCAATCCGTGAATGGC
TTCAACTTTAACAAGCCAACCGGCGGCCCTCCAGGAAGCTATTTTGCTGCTGGCTCGTCTATCCCCGTTACTGCT
TTGCAGAGCGCTGCTGCAACGGCTAGTACTGCTGTACCCGATGGTACCTATCCTATCAATAGAGAAAATGGAGCT
CAGGAAGTTACCATCCATAGCGACTGGGCGAACTTCAATCAGGGTGCGGCATATGTCTGGATCGCGGATATGGAT
GTCGACTGCGACGGTATTGACTATATGTGCAAGGAAGACGCGGACGGCCTGAACCAAACCAATTTTGGTGCTTTG
GCTGCCTATGAAGTGCCGTTCTTTGTGATTCCCGACAGGTTCGGAACCCAGTACGCAAAGCAGCTTCCCGGAAAT
AACATCGGTGCAGTGATCTGTGACGGCAAGATGTTCTACGGAGTTTACGGGGACTCCAATGGCGCTACCCCCCAA
GTTATCGGCGAGGCCTCGTGGTTGATGGCCCGGACTTGCTTCCCCAATGATAACTTGAACGGAAACAACGGCCAT
GGTGATGCTGATGTGACCTATATCATCTTCACTGGCAACAACTCGGTACTCCCTAGCAGTGCTCTCAATACAAGC
TATGTCACCAACTTCAGCATACTACGCTCTATGGGCGACAGGCTTGTGACCTCTCTTGCGCAGAACCTCGGGCTG
CCCTACTGGAGGCTTCTGAGTGAGAAGAAAATTGTGCTGGTGCCTCTTGCAAGACCGAGCATGGCAGTCAAGTGG
TCTGGAAAAGTGGGAAATGCACGAATGAGTGATTGCGACCTGGTAGCTATGGGGGATTTGATCTAA
Transcript >Pro_DTO377G3_2|g9230.t1
ATGATCTATAGCCGCTCGATTCCCTTTGTCCTTTTTGCCTTGTTTGGCACAGGACTCACGCAATCCGTGAATGGC
TTCAACTTTAACAAGCCAACCGGCGGCCCTCCAGGAAGCTATTTTGCTGCTGGCTCGTCTATCCCCGTTACTGCT
TTGCAGAGCGCTGCTGCAACGGCTAGTACTGCTGTACCCGATGGTACCTATCCTATCAATAGAGAAAATGGAGCT
CAGGAAGTTACCATCCATAGCGACTGGGCGAACTTCAATCAGGGTGCGGCATATGTCTGGATCGCGGATATGGAT
GTCGACTGCGACGGTATTGACTATATGTGCAAGGAAGACGCGGACGGCCTGAACCAAACCAATTTTGGTGCTTTG
GCTGCCTATGAAGTGCCGTTCTTTGTGATTCCCGACAGGTTCGGAACCCAGTACGCAAAGCAGCTTCCCGGAAAT
AACATCGGTGCAGTGATCTGTGACGGCAAGATGTTCTACGGAGTTTACGGGGACTCCAATGGCGCTACCCCCCAA
GTTATCGGCGAGGCCTCGTGGTTGATGGCCCGGACTTGCTTCCCCAATGATAACTTGAACGGAAACAACGGCCAT
GGTGATGCTGATGTGACCTATATCATCTTCACTGGCAACAACTCGGTACTCCCTAGCAGTGCTCTCAATACAAGC
TATGTCACCAACTTCAGCATACTACGCTCTATGGGCGACAGGCTTGTGACCTCTCTTGCGCAGAACCTCGGGCTG
CCCTACTGGAGGCTTCTGAGTGAGAAGAAAATTGTGCTGGTGCCTCTTGCAAGACCGAGCATGGCAGTCAAGTGG
TCTGGAAAAGTGGGAAATGCACGAATGAGTGATTGCGACCTGGTAGCTATGGGGGATTTGATCTAA
Gene >Pro_DTO377G3_2|g9230.t1
ATGATCTATAGCCGCTCGATTCCCTTTGTCCTTTTTGCCTTGTTTGGCACAGGACTCACGCAATCCGTGAATGGC
TTCAACTTTAACAAGCCAACCGGCGGCCCTCCAGGAAGCTATTTTGCTGCTGGCTCGTCTATCCCCGTTACTGCT
TTGCAGAGCGCTGCTGCAACGGCTAGTACTGCTGTACCCGATGGTACCTATCCTATCAATAGAGAAAATGGAGCT
CAGGAAGTTACCATCCATAGCGACTGGGCGAACTTCAATCAGGTAGATACTCTCACTAGCCGGCTACTTGCAGGA
TCAAACTGATTGATAATAGGGTGCGGCATATGTCTGGATCGCGGATATGGATGTCGACTGCGACGGTATTGACTA
TATGTGCAAGGTAGGTGATTATTATTGTCTGTCTGGGATATTATTGCTAACCCTATGGTGCAGGAAGACGCGGAC
GGCCTGAACCAAACCAATTTTGGTGCTTTGGCTGCCTATGAAGTGCCGTTCTTTGTGATTCCCGACAGGTTCGGA
ACCCAGTACGCAAAGCAGCTTCCCGGAAATAACATCGGTGCAGTGATCTGGTATGACTTTCCTTCTTTGGTGGAT
ATTTCAGCGGCTTCCTGTTCTAACTAAAAGCTAGTGACGGCAAGATGTTCTACGGAGTTTACGGGGACTCCAATG
GCGCTACCCCCCAAGTTATCGGCGAGGCCTCGTGGTTGATGGCCCGGACTTGCTTCCCCAATGATAACTTGAACG
GAAACAACGGCCATGGTGATGCTGATGTGACCTGTAAGTCTGAAAATATATATTTCTTTTACTTTGGCGGCTACT
AATCCAACAAGATATCATCTTCACTGGCAACAACTCGGTACTCCCTAGCAGTGCTCTCAATACAAGCTATGTCAC
CAACTTCAGCATACTACGCTCTATGGGCGACAGGCTTGTGACCTCTCTTGCGCAGAACCTCGGGCTGGTAAATGG
AGGGTCCTCTTCTTCTATTGCAACGACGACCGCTGGCTCCAGCCCTACTGGAGGCTTCTGAGTGAGAAGAAAATT
GTGCTGGTAAGTAACCTTCAGCTCATATTCTTACTTCATGGTCACTAAGTAATTTTATAGGTGCCTCTTGCAAGA
CCGAGCATGGCAGTCAAGTGGTCTGGAAAAGTGGGAAATGCACGAATGAGTGATTGCGACCTGGTAGCTATGGGG
GATTTGATCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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