© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g9223.t1 |
| Gene name | |
| Location | scaffold_43:131046..132605 |
| Strand | + |
| Gene length (bp) | 1559 |
| Transcript length (bp) | 1437 |
| Coding sequence length (bp) | 1437 |
| Protein length (aa) | 479 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.0E-29 | 69 | 425 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 43 | 60 | 17 |
| 2 | 90 | 112 | 22 |
| 3 | 119 | 138 | 19 |
| 4 | 148 | 170 | 22 |
| 5 | 179 | 201 | 22 |
| 6 | 211 | 233 | 22 |
| 7 | 285 | 307 | 22 |
| 8 | 317 | 339 | 22 |
| 9 | 344 | 366 | 22 |
| 10 | 371 | 393 | 22 |
| 11 | 406 | 428 | 22 |
| 12 | 438 | 460 | 22 |
| Orthofinder run ID | 2 |
| Orthogroup | 282 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g9223.t1 MASEKRDELEVITSSIPSTPPNEINREDNEYNAKLEKRVMRKIDFWLVGFYSLVYIFRVIDSNNYSNAAIINLEA GTGIKKELNFSAAQWSWTQSIFSYSYLFFEPTNTILLKRATPSRWMFVLILGWGICACAAGAAKDFPGMMCVRFA IGLAEAGFYPSVLYHMAFWYKPSELRWRIALFYSLGQISGALSGLLAYAISFMDGAGGLSGWRWLFVIEGLPAIV LSVVALFGLPDYPETARMLTEEERTFLKGRLSSTAPSGNDKSWNWGDFKTLLSSPTLYTFTIYWIGHGIGGFGVN YALPTVIYELGFTTTALSQLMNIPPYVACFFFLNILGYLLHKGWIRPWTTAVAIESTTIICYIILITVKNSVVKY LALIVATACAGSAYPVIWPERIRALEGTVAVGMGIGLTNAMAQFSGIAGPHIYSTVFGPTYRVSYVICLCFLCAA ISGILASWWLVWRKDRKNELAAEIEEDA* |
| Coding | >Pro_DTO377G3_2|g9223.t1 ATGGCTTCGGAGAAGCGCGACGAGCTGGAAGTCATTACTTCCAGCATACCTTCAACTCCGCCCAATGAGATCAAT CGCGAAGACAATGAATATAACGCCAAACTCGAGAAGAGAGTGATGCGAAAAATAGATTTCTGGCTCGTTGGGTTT TACTCGCTTGTATATATCTTCCGTGTCATTGATTCCAACAACTACTCCAACGCCGCAATCATCAACCTAGAAGCC GGCACTGGAATCAAGAAAGAGCTCAATTTCAGCGCCGCACAATGGTCCTGGACACAGTCCATCTTCTCCTACAGC TACCTCTTTTTCGAGCCCACCAACACCATTCTTCTCAAACGCGCCACGCCTTCGAGATGGATGTTCGTGTTGATT TTGGGCTGGGGTATCTGCGCCTGCGCTGCTGGTGCTGCAAAGGACTTTCCGGGGATGATGTGTGTACGATTTGCA ATTGGACTGGCTGAAGCCGGTTTCTATCCTTCTGTGCTCTACCACATGGCATTCTGGTACAAGCCATCTGAGCTG CGCTGGAGGATAGCCCTTTTCTACTCTCTCGGTCAAATATCTGGCGCATTGAGTGGGCTGCTAGCATATGCCATC AGCTTTATGGATGGGGCCGGTGGTCTTTCAGGCTGGCGATGGCTGTTTGTCATCGAAGGCCTTCCGGCAATCGTG CTATCTGTGGTAGCTTTATTCGGTCTTCCGGACTACCCCGAGACCGCCCGAATGTTGACCGAAGAAGAGAGAACG TTCCTCAAGGGCCGTCTATCCTCTACAGCACCCTCAGGAAATGATAAAAGCTGGAACTGGGGGGACTTCAAAACA CTTCTCTCAAGTCCGACCCTGTACACATTCACAATCTACTGGATTGGACATGGCATTGGCGGATTTGGAGTGAAT TACGCTCTACCTACTGTTATCTATGAGCTTGGCTTTACCACAACCGCTCTATCACAGCTGATGAATATTCCTCCA TATGTCGCATGCTTTTTCTTCTTGAATATTCTCGGGTATTTACTACACAAAGGATGGATCAGACCCTGGACCACC GCTGTTGCGATCGAAAGCACGACAATCATCTGCTATATCATCCTGATTACAGTCAAGAACTCAGTCGTCAAATAC CTCGCTTTGATTGTAGCTACCGCTTGTGCGGGATCTGCATACCCTGTCATCTGGCCAGAACGTATTCGTGCGCTT GAGGGTACAGTGGCCGTGGGTATGGGTATTGGGCTGACGAATGCCATGGCCCAGTTCAGTGGCATCGCTGGGCCT CATATATACAGTACGGTGTTTGGACCGACGTATCGAGTGTCATATGTTATCTGTCTTTGCTTCCTGTGTGCGGCT ATCTCGGGCATTCTGGCTTCGTGGTGGCTTGTCTGGCGGAAGGATCGAAAGAACGAATTAGCCGCTGAGATTGAA GAAGATGCATGA |
| Transcript | >Pro_DTO377G3_2|g9223.t1 ATGGCTTCGGAGAAGCGCGACGAGCTGGAAGTCATTACTTCCAGCATACCTTCAACTCCGCCCAATGAGATCAAT CGCGAAGACAATGAATATAACGCCAAACTCGAGAAGAGAGTGATGCGAAAAATAGATTTCTGGCTCGTTGGGTTT TACTCGCTTGTATATATCTTCCGTGTCATTGATTCCAACAACTACTCCAACGCCGCAATCATCAACCTAGAAGCC GGCACTGGAATCAAGAAAGAGCTCAATTTCAGCGCCGCACAATGGTCCTGGACACAGTCCATCTTCTCCTACAGC TACCTCTTTTTCGAGCCCACCAACACCATTCTTCTCAAACGCGCCACGCCTTCGAGATGGATGTTCGTGTTGATT TTGGGCTGGGGTATCTGCGCCTGCGCTGCTGGTGCTGCAAAGGACTTTCCGGGGATGATGTGTGTACGATTTGCA ATTGGACTGGCTGAAGCCGGTTTCTATCCTTCTGTGCTCTACCACATGGCATTCTGGTACAAGCCATCTGAGCTG CGCTGGAGGATAGCCCTTTTCTACTCTCTCGGTCAAATATCTGGCGCATTGAGTGGGCTGCTAGCATATGCCATC AGCTTTATGGATGGGGCCGGTGGTCTTTCAGGCTGGCGATGGCTGTTTGTCATCGAAGGCCTTCCGGCAATCGTG CTATCTGTGGTAGCTTTATTCGGTCTTCCGGACTACCCCGAGACCGCCCGAATGTTGACCGAAGAAGAGAGAACG TTCCTCAAGGGCCGTCTATCCTCTACAGCACCCTCAGGAAATGATAAAAGCTGGAACTGGGGGGACTTCAAAACA CTTCTCTCAAGTCCGACCCTGTACACATTCACAATCTACTGGATTGGACATGGCATTGGCGGATTTGGAGTGAAT TACGCTCTACCTACTGTTATCTATGAGCTTGGCTTTACCACAACCGCTCTATCACAGCTGATGAATATTCCTCCA TATGTCGCATGCTTTTTCTTCTTGAATATTCTCGGGTATTTACTACACAAAGGATGGATCAGACCCTGGACCACC GCTGTTGCGATCGAAAGCACGACAATCATCTGCTATATCATCCTGATTACAGTCAAGAACTCAGTCGTCAAATAC CTCGCTTTGATTGTAGCTACCGCTTGTGCGGGATCTGCATACCCTGTCATCTGGCCAGAACGTATTCGTGCGCTT GAGGGTACAGTGGCCGTGGGTATGGGTATTGGGCTGACGAATGCCATGGCCCAGTTCAGTGGCATCGCTGGGCCT CATATATACAGTACGGTGTTTGGACCGACGTATCGAGTGTCATATGTTATCTGTCTTTGCTTCCTGTGTGCGGCT ATCTCGGGCATTCTGGCTTCGTGGTGGCTTGTCTGGCGGAAGGATCGAAAGAACGAATTAGCCGCTGAGATTGAA GAAGATGCATGA |
| Gene | >Pro_DTO377G3_2|g9223.t1 ATGGCTTCGGAGAAGCGCGACGAGCTGGAAGTCATTACTTCCAGCATACCTTCAACTCCGCCCAATGAGATCAAT CGCGAAGACAATGAATATAACGCCAAACTCGAGAAGAGAGTGATGCGAAAAATAGATTTCTGGCTCGTTGGGTTT TACTCGCTTGTATATATCTTCCGTGTCATTGATTCCAACAACTACTCCAACGCCGCAATCATCAACCTAGAAGCC GGCACTGGAATCAAGAAAGAGCTCAATTTCAGCGCCGCACAATGGTCCTGGACACAGTCCATCTTCTCCTACAGC TACCTCTTTTTCGAGCCCACCAACACCATTCTTCTCAAACGCGCCACGCCTTCGAGATGGATGTTCGTGTTGATT TTGGGCTGGGGTATCTGCGCCTGCGCTGCTGGTGCTGCAAAGGACTTTCCGGGGATGATGTGTGTACGATTTGCA ATTGGACTGGCTGAAGCCGGTTTCTATCCTTCTGTGCTCTACCACATGGCATTCTGGTACAAGCCATCTGAGCTG CGCTGGAGGATAGCCCTTTTCTACTCTCTCGGTCAAATATCTGGCGCATTGAGTGGGCTGCTAGCATATGCCATC AGCTTTATGGATGGGGCCGGTGGTCTTTCAGGCTGGCGATGGCTGTTTGTCATCGAAGGCCTTCCGGCAATCGTG CTATCTGTGGTAGCTTTATTCGGTCTTCCGGACTACCCCGAGACCGCCCGAATGTTGACCGAAGAAGAGAGAACG TTCCTCAAGGGCCGTCTATCCTCTACAGCACCCTCAGGAAATGATAAAAGCTGGAACTGGGGGGACTTCAAAACA CTTCTCTCAAGTCCGACCCTGTACACATTCACAATCTACTGGATTGGACATGGCATTGGCGGATTTGGAGTGAAT TACGCTCTACCTACTGTTATCTATGAGCTTGGCTTTACCACAACCGCTCTATCACAGCTGATGAATATTGTGAGT TGGAATCAATCTAGGGAAACACACCAATACGCAAGGCATCGCTAACCGGACTCATACTCAATAGCCTCCATATGT CGCATGCTTTTTCTTCTTGAATATTCTCGGGTATTTACTACACAAAGGATGGATCAGACCCTGGACCACCGCTGT TGCGAGTAAGTATTAATTCCCGCATTACACATGGAGTTCCTACTGACAACAAATCAGTCGAAAGCACGACAATCA TCTGCTATATCATCCTGATTACAGTCAAGAACTCAGTCGTCAAATACCTCGCTTTGATTGTAGCTACCGCTTGTG CGGGATCTGCATACCCTGTCATCTGGCCAGAACGTATTCGTGCGCTTGAGGGTACAGTGGCCGTGGGTATGGGTA TTGGGCTGACGAATGCCATGGCCCAGTTCAGTGGCATCGCTGGGCCTCATATATACAGTACGGTGTTTGGACCGA CGTATCGAGTGTCATATGTTATCTGTCTTTGCTTCCTGTGTGCGGCTATCTCGGGCATTCTGGCTTCGTGGTGGC TTGTCTGGCGGAAGGATCGAAAGAACGAATTAGCCGCTGAGATTGAAGAAGATGCATGA |