Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9213.t1
Gene name
Locationscaffold_43:106982..108038
Strand+
Gene length (bp)1056
Transcript length (bp)816
Coding sequence length (bp)816
Protein length (aa) 272

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02492 cobW CobW/HypB/UreG, nucleotide-binding domain 1.4E-32 55 222

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9213.t1
MAHSHSHDAGIDHSHDDPFNGHGHAHDILDGPGSYVNREMPLIEGRDWKDRAFTIGIGGPVGSGKTALMLALSRA
LRDEYNIAAVTNDIFTREDAEFLTRHKALAPSRIRAIETGGCPHAAVREDISANLLALQKLQKQFTTDLLLIESG
GDNLAANYSRELADFIIYVIDVAGGDKVPRKGGPGITGSDLLVVNKIDLAEAVGADLAVMERDAAKMREGGPTVF
AVVKHGKGMDHIVNLIISAWKGSGAYEVSLQRWKDGAVRGSGSLDE*
Coding >Pro_DTO377G3_2|g9213.t1
ATGGCACACTCTCACTCCCACGACGCCGGCATTGACCATTCCCACGATGACCCCTTCAACGGCCACGGCCATGCA
CACGATATCCTCGATGGCCCAGGCTCCTACGTCAACCGCGAGATGCCCCTGATCGAAGGCCGAGACTGGAAGGAT
CGTGCCTTCACTATTGGTATTGGTGGACCCGTAGGATCCGGCAAGACAGCCCTGATGCTAGCGCTATCTCGCGCC
CTTCGAGACGAGTATAATATCGCCGCAGTGACGAACGATATCTTCACAAGAGAAGACGCCGAATTCTTAACCCGC
CACAAAGCCCTGGCGCCGTCACGCATCCGCGCCATTGAAACAGGCGGTTGCCCGCACGCCGCGGTGCGCGAAGAC
ATCAGCGCGAACCTGCTCGCGCTGCAGAAACTACAGAAGCAGTTCACAACGGACCTGTTGCTGATCGAGTCTGGG
GGTGACAACCTGGCTGCGAACTACTCGCGCGAGTTGGCGGATTTCATCATCTACGTGATTGACGTTGCGGGTGGT
GATAAGGTGCCTCGTAAGGGTGGACCGGGAATCACGGGGTCTGATCTACTTGTTGTGAACAAGATTGATCTTGCT
GAAGCTGTTGGAGCAGATCTTGCTGTCATGGAGAGAGATGCGGCGAAGATGAGGGAGGGGGGTCCGACGGTGTTT
GCGGTCGTTAAGCATGGGAAGGGGATGGATCATATTGTTAATCTGATTATTAGTGCTTGGAAGGGCAGTGGAGCT
TATGAGGTTAGTTTGCAGAGGTGGAAGGATGGGGCTGTTAGGGGGTCTGGGAGTCTTGATGAGTAG
Transcript >Pro_DTO377G3_2|g9213.t1
ATGGCACACTCTCACTCCCACGACGCCGGCATTGACCATTCCCACGATGACCCCTTCAACGGCCACGGCCATGCA
CACGATATCCTCGATGGCCCAGGCTCCTACGTCAACCGCGAGATGCCCCTGATCGAAGGCCGAGACTGGAAGGAT
CGTGCCTTCACTATTGGTATTGGTGGACCCGTAGGATCCGGCAAGACAGCCCTGATGCTAGCGCTATCTCGCGCC
CTTCGAGACGAGTATAATATCGCCGCAGTGACGAACGATATCTTCACAAGAGAAGACGCCGAATTCTTAACCCGC
CACAAAGCCCTGGCGCCGTCACGCATCCGCGCCATTGAAACAGGCGGTTGCCCGCACGCCGCGGTGCGCGAAGAC
ATCAGCGCGAACCTGCTCGCGCTGCAGAAACTACAGAAGCAGTTCACAACGGACCTGTTGCTGATCGAGTCTGGG
GGTGACAACCTGGCTGCGAACTACTCGCGCGAGTTGGCGGATTTCATCATCTACGTGATTGACGTTGCGGGTGGT
GATAAGGTGCCTCGTAAGGGTGGACCGGGAATCACGGGGTCTGATCTACTTGTTGTGAACAAGATTGATCTTGCT
GAAGCTGTTGGAGCAGATCTTGCTGTCATGGAGAGAGATGCGGCGAAGATGAGGGAGGGGGGTCCGACGGTGTTT
GCGGTCGTTAAGCATGGGAAGGGGATGGATCATATTGTTAATCTGATTATTAGTGCTTGGAAGGGCAGTGGAGCT
TATGAGGTTAGTTTGCAGAGGTGGAAGGATGGGGCTGTTAGGGGGTCTGGGAGTCTTGATGAGTAG
Gene >Pro_DTO377G3_2|g9213.t1
ATGGCACACTCTCACTCCCACGACGCCGGCATTGACCATTCCCACGATGACCCCTTCAACGGCCACGGCCATGCA
CACGATATCCTCGATGGCCCAGGCTCCTACGTCAACCGCGAGATGCCCCTGATCGAAGGCCGAGACTGGAAGGAT
CGTGCCTTCACTATTGGTATTGGTGGGTATGTTGCCATTCTCTATCCTGCAATCAACCTCTATTTCACCTGCTTT
ATACCAATGCATATCCATTCAAATCACCACACCTATATGCATAGCCAGTGACTAACACATGAGTTTTGGATCTGA
ATAGACCCGTAGGATCCGGCAAGACAGCCCTGATGCTAGCGCTATCTCGCGCCCTTCGAGACGAGTATAATATCG
CCGCAGTGACGAACGATATCTTCACAAGGTACGAGAGAATACCCTAACCCCACCTACCAACCCCACACCCACACC
CGAAACAACAAGACTCGTACCTACCATACCTCACCAACATTATTAATCATTCTCTCGAAAAACAGAGAAGACGCC
GAATTCTTAACCCGCCACAAAGCCCTGGCGCCGTCACGCATCCGCGCCATTGAAACAGGCGGTTGCCCGCACGCC
GCGGTGCGCGAAGACATCAGCGCGAACCTGCTCGCGCTGCAGAAACTACAGAAGCAGTTCACAACGGACCTGTTG
CTGATCGAGTCTGGGGGTGACAACCTGGCTGCGAACTACTCGCGCGAGTTGGCGGATTTCATCATCTACGTGATT
GACGTTGCGGGTGGTGATAAGGTGCCTCGTAAGGGTGGACCGGGAATCACGGGGTCTGATCTACTTGTTGTGAAC
AAGATTGATCTTGCTGAAGCTGTTGGAGCAGATCTTGCTGTCATGGAGAGAGATGCGGCGAAGATGAGGGAGGGG
GGTCCGACGGTGTTTGCGGTCGTTAAGCATGGGAAGGGGATGGATCATATTGTTAATCTGATTATTAGTGCTTGG
AAGGGCAGTGGAGCTTATGAGGTTAGTTTGCAGAGGTGGAAGGATGGGGCTGTTAGGGGGTCTGGGAGTCTTGAT
GAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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