© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g9193.t1 |
| Gene name | |
| Location | scaffold_43:59135..60917 |
| Strand | + |
| Gene length (bp) | 1782 |
| Transcript length (bp) | 1620 |
| Coding sequence length (bp) | 1620 |
| Protein length (aa) | 540 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 2.5E-79 | 52 | 478 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 61 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 56 | 78 | 22 |
| 2 | 88 | 110 | 22 |
| 3 | 131 | 153 | 22 |
| 4 | 173 | 190 | 17 |
| 5 | 199 | 221 | 22 |
| 6 | 250 | 272 | 22 |
| 7 | 292 | 314 | 22 |
| 8 | 340 | 362 | 22 |
| 9 | 386 | 406 | 20 |
| 10 | 421 | 438 | 17 |
| 11 | 451 | 473 | 22 |
| 12 | 483 | 505 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g9193.t1 MDIRERQPLLNPSSQSNIISPSPQQEPLDLLTDDFPPLYPDTLPGTHYRKSINWSSAYILVVSQVIGSGIFATPG SIVRSAGSIGLTLLVWLVGTILSACGLAVFMEFGCMLPRSGGQKVYLEYTYPRPRFLASSLITAQVVLLGFTASN CIIFSKYAFFALSIEPTEIQHKALAVGLLTAITIVHGCFLKTGIFVQNVLGWVKIFLIGAMSLTGVWVVFLGLHG DTDNLSPVERVGPFSWDSLWEGSNWSWSLLSSALFKVYYSYAGLSNVNNVLSEVHDPVNIVKTVCPTALVTAGGL YFLANLSYFLVIPLEEIKNSGELVGALLFERLFGDQVGKIFFPLAIAISAAGNVMVVTFGLARVNQEIARQGFLP WQNILSSSRPFGTPLGGLIVHYIPSMLVLALPPQGDVYNFILDLEGYPGQMFALAITVGLLIVRYREPDLPRPFK AWLPAVWLRVVVCLILLVAPFVPPPNWRDLDLFYATYPLVGIGIMLSGVLYWYIWTVLLPRWRGYKLEEENHILA DGTSIIRLVHSYDK* |
| Coding | >Pro_DTO377G3_2|g9193.t1 ATGGATATCCGGGAGAGACAGCCTCTTTTAAACCCATCAAGTCAATCCAACATTATATCTCCCAGCCCTCAACAA GAACCACTCGACCTTTTAACCGATGATTTCCCCCCACTATATCCCGATACCCTACCAGGGACGCACTACAGAAAG AGCATCAACTGGTCAAGCGCATACATCCTAGTCGTTTCGCAGGTGATTGGGAGCGGTATCTTCGCAACACCAGGC TCAATCGTCAGATCCGCTGGAAGTATTGGATTGACCCTGCTAGTATGGCTGGTTGGGACGATATTATCAGCTTGC GGCCTAGCCGTATTTATGGAATTCGGATGCATGCTACCTCGCTCGGGAGGACAAAAGGTGTACCTCGAGTATACC TATCCCCGACCGCGCTTTCTCGCGTCAAGCCTTATAACAGCTCAGGTAGTGCTCCTAGGGTTCACGGCGAGCAAC TGCATTATCTTCTCGAAATACGCGTTCTTCGCGCTGAGTATTGAGCCTACCGAAATCCAGCACAAGGCACTCGCT GTTGGCCTCTTGACTGCCATTACTATTGTCCATGGTTGTTTCTTGAAAACTGGCATCTTTGTCCAGAATGTCCTT GGCTGGGTGAAGATCTTCCTCATCGGCGCGATGTCCTTGACGGGAGTCTGGGTAGTTTTTCTCGGCTTGCATGGA GATACTGATAACTTATCGCCTGTAGAGAGAGTTGGTCCGTTTTCTTGGGATTCGTTGTGGGAAGGATCGAACTGG AGCTGGAGTCTGCTTTCGTCGGCTTTGTTCAAAGTCTACTATTCCTACGCTGGCTTGAGCAACGTGAACAATGTC CTCAGTGAGGTTCATGATCCCGTGAATATAGTCAAGACCGTGTGTCCCACTGCGCTGGTCACGGCTGGGGGCCTA TACTTTCTTGCGAATCTTTCATACTTCCTTGTCATTCCGCTCGAAGAGATCAAGAATAGCGGGGAATTAGTGGGT GCACTGCTATTCGAGAGATTATTTGGGGATCAGGTTGGGAAGATATTCTTTCCACTTGCTATTGCCATTTCAGCT GCCGGGAATGTGATGGTGGTGACCTTTGGCTTGGCGCGTGTGAATCAAGAGATAGCCCGACAAGGCTTTCTTCCA TGGCAAAACATTCTATCGTCTTCGCGACCATTTGGGACCCCACTGGGGGGACTTATTGTACACTATATCCCTTCC ATGTTGGTCCTCGCCCTACCACCACAAGGGGACGTCTATAACTTTATCCTGGACTTGGAGGGATATCCTGGACAG ATGTTTGCATTGGCTATCACAGTTGGTCTGCTTATAGTAAGATACCGGGAGCCTGATCTTCCACGGCCCTTCAAA GCGTGGTTGCCGGCTGTCTGGTTACGGGTTGTGGTGTGTTTAATCCTGCTAGTAGCACCATTCGTCCCTCCTCCG AATTGGCGCGACCTCGATCTCTTCTATGCAACCTATCCACTTGTCGGGATTGGAATTATGCTCTCTGGGGTTCTC TACTGGTATATCTGGACAGTTTTACTCCCACGATGGAGAGGCTATAAACTCGAGGAAGAGAATCATATTTTAGCC GACGGAACTAGCATCATCAGGCTTGTTCATTCATATGATAAGTGA |
| Transcript | >Pro_DTO377G3_2|g9193.t1 ATGGATATCCGGGAGAGACAGCCTCTTTTAAACCCATCAAGTCAATCCAACATTATATCTCCCAGCCCTCAACAA GAACCACTCGACCTTTTAACCGATGATTTCCCCCCACTATATCCCGATACCCTACCAGGGACGCACTACAGAAAG AGCATCAACTGGTCAAGCGCATACATCCTAGTCGTTTCGCAGGTGATTGGGAGCGGTATCTTCGCAACACCAGGC TCAATCGTCAGATCCGCTGGAAGTATTGGATTGACCCTGCTAGTATGGCTGGTTGGGACGATATTATCAGCTTGC GGCCTAGCCGTATTTATGGAATTCGGATGCATGCTACCTCGCTCGGGAGGACAAAAGGTGTACCTCGAGTATACC TATCCCCGACCGCGCTTTCTCGCGTCAAGCCTTATAACAGCTCAGGTAGTGCTCCTAGGGTTCACGGCGAGCAAC TGCATTATCTTCTCGAAATACGCGTTCTTCGCGCTGAGTATTGAGCCTACCGAAATCCAGCACAAGGCACTCGCT GTTGGCCTCTTGACTGCCATTACTATTGTCCATGGTTGTTTCTTGAAAACTGGCATCTTTGTCCAGAATGTCCTT GGCTGGGTGAAGATCTTCCTCATCGGCGCGATGTCCTTGACGGGAGTCTGGGTAGTTTTTCTCGGCTTGCATGGA GATACTGATAACTTATCGCCTGTAGAGAGAGTTGGTCCGTTTTCTTGGGATTCGTTGTGGGAAGGATCGAACTGG AGCTGGAGTCTGCTTTCGTCGGCTTTGTTCAAAGTCTACTATTCCTACGCTGGCTTGAGCAACGTGAACAATGTC CTCAGTGAGGTTCATGATCCCGTGAATATAGTCAAGACCGTGTGTCCCACTGCGCTGGTCACGGCTGGGGGCCTA TACTTTCTTGCGAATCTTTCATACTTCCTTGTCATTCCGCTCGAAGAGATCAAGAATAGCGGGGAATTAGTGGGT GCACTGCTATTCGAGAGATTATTTGGGGATCAGGTTGGGAAGATATTCTTTCCACTTGCTATTGCCATTTCAGCT GCCGGGAATGTGATGGTGGTGACCTTTGGCTTGGCGCGTGTGAATCAAGAGATAGCCCGACAAGGCTTTCTTCCA TGGCAAAACATTCTATCGTCTTCGCGACCATTTGGGACCCCACTGGGGGGACTTATTGTACACTATATCCCTTCC ATGTTGGTCCTCGCCCTACCACCACAAGGGGACGTCTATAACTTTATCCTGGACTTGGAGGGATATCCTGGACAG ATGTTTGCATTGGCTATCACAGTTGGTCTGCTTATAGTAAGATACCGGGAGCCTGATCTTCCACGGCCCTTCAAA GCGTGGTTGCCGGCTGTCTGGTTACGGGTTGTGGTGTGTTTAATCCTGCTAGTAGCACCATTCGTCCCTCCTCCG AATTGGCGCGACCTCGATCTCTTCTATGCAACCTATCCACTTGTCGGGATTGGAATTATGCTCTCTGGGGTTCTC TACTGGTATATCTGGACAGTTTTACTCCCACGATGGAGAGGCTATAAACTCGAGGAAGAGAATCATATTTTAGCC GACGGAACTAGCATCATCAGGCTTGTTCATTCATATGATAAGTGA |
| Gene | >Pro_DTO377G3_2|g9193.t1 ATGGATATCCGGGAGAGACAGCCTCTTTTAAACCCATCAAGTCAATCCAACATTATATCTCCCAGCCCTCAACAA GAACCACTCGACCTTTTAACCGATGATTTCCCCCCACTATATCCCGATACCCTACCAGGGACGCACTACAGAAAG AGCATCAACTGGTCAAGCGCATACATCCTAGTCGTTTCGCAGGTGATTGGGAGCGGTATCTTCGCAACACCAGGC TCAATCGTCAGATCCGCTGGAAGTATTGGATTGACCCTGCTAGTATGGCTGGTTGGGACGATATTATCAGCTTGC GGCCTAGCCGTATTTATGGAATTCGGATGCATGCTACCTCGCTCGGGAGGACAAAAGGTAAAAGACATTGCAGCA GGATTAGCAGAAACAAGTCGGCTAAACTAATCTCATTTCCGTGCAGGTGTACCTCGAGTATACCTATCCCCGACC GCGCTTTCTCGCGTCAAGCCTTATAACAGCTCAGGTAGTGCTCCTAGGGTTCACGGCGAGCAACTGCATTATCTT CTCGAAATACGCGTTCTTCGCGCTGAGTATTGAGCCTACCGAAATCCAGCACAAGGCACTCGCTGTTGGCCTCTT GACTGCCATTACTATTGTCCATGGTTGTTTCTTGAAAACTGGCATCTTTGTCCAGAATGTCCTTGGCTGGGTGAA GATCTTCCTCATCGGCGCGATGTCCTTGACGGGAGTCTGGGTAGTTTTTCTCGGCTTGCATGGAGATACTGATAA CTTATCGCCTGTAGAGAGAGTTGGTCCGTTTTCTTGGGATTCGTTGTGGGAAGGATCGAACTGGAGCTGGAGTCT GCTTTCGTCGGCTTTGTTCAAAGTCTACTATTCCTACGCTGGCTTGAGCAACGTGAACAATGTCCTCAGTGAGGT TCATGATCCCGTGAATATAGTCAAGACCGTGTGTCCCACTGCGCTGGTCACGGCTGGGGGCCTATACTTTCTTGC GAATCTTTCATACTTCCTTGTCATTCCGCTCGAAGAGATCAAGAATAGCGGGGAATTAGTGGGTGCACTGCTATT CGAGAGATTATTTGGGGATCAGGTTGGGAAGATATTCTTTCCACTTGCTATTGCCATTTCAGCTGCCGGGAATGT GATGGTGGTGACCTTTGGCTTGGTACGTTTGGATATATTGCATAGAAAGCCAATACATGCTAACATTGATAGGCG CGTGTGAATCAAGAGATAGCCCGACAAGGCTTTCTTCCATGGCAAAACATTCTATCGTCTTCGCGACCATTTGGG ACCCCACTGGGGGGACTTATTGTACACTATATCCCTTCCATGTTGGTCCTCGCCCTACCACCACAAGGGGACGTC TATAACTTTATCCTGGACTTGGAGGGATATCCTGGACAGATGTTTGCATTGGCTATCACAGTTGGTCTGCTTATA GTAAGATACCGGGAGCCTGATCTTCCACGGCCCTTCAAAGCGTGGTTGCCGGCTGTCTGGTTACGGGTTGTGGTG TGTTTAATCCTGCTAGTAGCACCATTCGTCCCTCCTCCGAATTGGCGCGACCTCGATCTCTTCTATGCAACCTAT CCACTTGTCGGGATTGGAATGTGAGTGGCAATACTTCTATGTGTGATTTACCTCGCTAACAAACACAGTATGCTC TCTGGGGTTCTCTACTGGTATATCTGGACAGTTTTACTCCCACGATGGAGAGGCTATAAACTCGAGGAAGAGAAT CATATTTTAGCCGACGGAACTAGCATCATCAGGCTTGTTCATTCATATGATAAGTGA |