Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9185.t1
Gene name
Locationscaffold_43:39966..40586
Strand+
Gene length (bp)620
Transcript length (bp)441
Coding sequence length (bp)441
Protein length (aa) 147

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00034 Cytochrom_C Cytochrome c 2.1E-12 46 143
PF13442 Cytochrome_CBB3 Cytochrome C oxidase, cbb3-type, subunit III 1.0E-05 45 141

GO

GO Term Description Terminal node
GO:0020037 heme binding Yes
GO:0009055 electron transfer activity Yes
GO:0097159 organic cyclic compound binding No
GO:0046906 tetrapyrrole binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0048037 cofactor binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9185.t1
MTTFDVFCTLTIIDMREAERAKATLVEEAKKEADKIANLNFAPGDAAKGAKLFQTRCAQCHTTEAGGAHKVGPNL
HGLFGRHSGQAEGYAYTDANKQAGVEWNENSLFSYLENPKKFIPGTKMAFGGLKKTKERNDLITWLKDNTA*
Coding >Pro_DTO377G3_2|g9185.t1
ATGACTACCTTCGATGTGTTCTGCACCTTGACGATCATCGACATGCGCGAGGCAGAGCGTGCCAAGGCCACTCTC
GTCGAAGAAGCCAAGAAGGAAGCCGACAAAATCGCTAATCTCAACTTCGCTCCAGGTGACGCCGCCAAGGGTGCC
AAGCTCTTCCAGACCCGTTGCGCCCAGTGCCACACCACCGAGGCCGGCGGTGCCCACAAGGTCGGCCCCAACCTC
CACGGTCTTTTCGGCCGTCACAGTGGTCAAGCCGAGGGTTACGCCTACACCGACGCCAACAAGCAGGCCGGTGTT
GAGTGGAACGAGAACTCTCTGTTCTCCTACCTCGAGAACCCCAAGAAGTTCATCCCCGGTACCAAGATGGCCTTC
GGTGGTCTCAAGAAGACCAAGGAGCGCAACGATCTCATCACCTGGCTCAAGGATAACACCGCATAA
Transcript >Pro_DTO377G3_2|g9185.t1
ATGACTACCTTCGATGTGTTCTGCACCTTGACGATCATCGACATGCGCGAGGCAGAGCGTGCCAAGGCCACTCTC
GTCGAAGAAGCCAAGAAGGAAGCCGACAAAATCGCTAATCTCAACTTCGCTCCAGGTGACGCCGCCAAGGGTGCC
AAGCTCTTCCAGACCCGTTGCGCCCAGTGCCACACCACCGAGGCCGGCGGTGCCCACAAGGTCGGCCCCAACCTC
CACGGTCTTTTCGGCCGTCACAGTGGTCAAGCCGAGGGTTACGCCTACACCGACGCCAACAAGCAGGCCGGTGTT
GAGTGGAACGAGAACTCTCTGTTCTCCTACCTCGAGAACCCCAAGAAGTTCATCCCCGGTACCAAGATGGCCTTC
GGTGGTCTCAAGAAGACCAAGGAGCGCAACGATCTCATCACCTGGCTCAAGGATAACACCGCATAA
Gene >Pro_DTO377G3_2|g9185.t1
ATGACTACCTTCGATGTGTTCTGCACCTTGACGATCATCGACATGCGCGAGGCAGAGCGTGCCAAGGCCACTCTC
GTCGAAGAAGCCAAGAAGGAAGCCGACAAAATCGCTAATCTCAACTTCGCTCCAGGTGACGCCGCCAAGGGTGCC
AAGCTCTTCCAGGTATGTTCATTATTGCTTCACGCGCAGACAAGTGAAGAGGAAACCTAACGGATATTTTTTTTT
CAGACCCGTTGCGCCCAGTGCCACACCACCGAGGCCGGCGGTGCCCACAAGGTCGGCCCCAACCTCCACGGTCTT
TTCGGCCGTCACAGTGGTCAAGCCGAGGGTTACGCCTACACCGACGCCAACAAGCAGGCCGGTGTTGAGTGGAAC
GAGAACTCTCTGGTAAGTGCCAACTGCCACGTTCAATTCCGCTCCGATCGGCGACTAACAATACCTATTAGTTCT
CCTACCTCGAGAACCCCAAGAAGTTCATCCCCGGTACCAAGATGGCCTTCGGTGGTCTCAAGAAGACCAAGGAGC
GCAACGATCTCATCACGTACGTCACCCGCGAATATCCACACTCCCCTGAACCCCACTGACAACCCCATAGCTGGC
TCAAGGATAACACCGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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