Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9181.t1
Gene name
Locationscaffold_43:26263..27311
Strand-
Gene length (bp)1048
Transcript length (bp)756
Coding sequence length (bp)756
Protein length (aa) 252

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12898 Stc1 Stc1 domain 4.9E-15 35 117

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9181.t1
MPPRRKRLPASPFARGYTPQMRAAVDRIPIPNEIKCCVCKRHRPQSQYSKNQLGYLRRAMFDLGYNSIYDQQVAK
CGPCTNAQVCEELCHRCGHYRAIDQFARNQRNRDSPICQPCMNYQMSLDPADQPLAITDKTVVEDQVEDEDEDED
EEEELNSESVGHFGSIGQPESVDIFGSTGQAESLEQGIETALVLHDDSTDSDGNESRNGFARVKAHRPRQAPVPE
PEPAPGWAPGTRKINDGTPWKGGRYL*
Coding >Pro_DTO377G3_2|g9181.t1
ATGCCTCCGCGACGGAAACGGCTCCCTGCGAGCCCATTTGCACGGGGATACACACCCCAAATGAGAGCGGCCGTG
GACCGAATTCCAATCCCAAACGAAATTAAATGCTGCGTCTGCAAGCGGCATCGCCCACAGTCCCAGTACTCGAAA
AACCAACTGGGCTACCTCCGCCGGGCAATGTTCGATCTTGGCTACAATAGCATTTATGACCAGCAGGTTGCTAAG
TGTGGCCCATGCACGAATGCCCAGGTTTGTGAGGAGCTCTGTCATCGTTGCGGTCACTACCGTGCCATTGACCAA
TTCGCCAGAAACCAACGCAATCGCGACAGTCCGATCTGCCAGCCCTGCATGAACTACCAGATGTCCCTCGATCCT
GCCGATCAGCCTCTGGCGATCACGGACAAAACCGTGGTTGAGGATCAGGTAGAGGATGAGGATGAGGATGAGGAT
GAGGAAGAGGAGCTCAATTCTGAGTCTGTGGGCCATTTTGGATCCATTGGACAACCCGAGTCTGTCGATATCTTT
GGCTCTACTGGTCAGGCCGAGAGTTTAGAGCAGGGCATCGAGACAGCTCTCGTCCTGCACGATGATTCCACTGAT
AGTGATGGCAATGAGAGCCGGAACGGATTTGCAAGAGTCAAGGCGCACCGTCCTCGTCAGGCGCCTGTCCCTGAG
CCCGAGCCTGCCCCAGGCTGGGCACCCGGTACTCGCAAGATCAATGATGGCACTCCTTGGAAAGGAGGAAGGTAT
CTCTAA
Transcript >Pro_DTO377G3_2|g9181.t1
ATGCCTCCGCGACGGAAACGGCTCCCTGCGAGCCCATTTGCACGGGGATACACACCCCAAATGAGAGCGGCCGTG
GACCGAATTCCAATCCCAAACGAAATTAAATGCTGCGTCTGCAAGCGGCATCGCCCACAGTCCCAGTACTCGAAA
AACCAACTGGGCTACCTCCGCCGGGCAATGTTCGATCTTGGCTACAATAGCATTTATGACCAGCAGGTTGCTAAG
TGTGGCCCATGCACGAATGCCCAGGTTTGTGAGGAGCTCTGTCATCGTTGCGGTCACTACCGTGCCATTGACCAA
TTCGCCAGAAACCAACGCAATCGCGACAGTCCGATCTGCCAGCCCTGCATGAACTACCAGATGTCCCTCGATCCT
GCCGATCAGCCTCTGGCGATCACGGACAAAACCGTGGTTGAGGATCAGGTAGAGGATGAGGATGAGGATGAGGAT
GAGGAAGAGGAGCTCAATTCTGAGTCTGTGGGCCATTTTGGATCCATTGGACAACCCGAGTCTGTCGATATCTTT
GGCTCTACTGGTCAGGCCGAGAGTTTAGAGCAGGGCATCGAGACAGCTCTCGTCCTGCACGATGATTCCACTGAT
AGTGATGGCAATGAGAGCCGGAACGGATTTGCAAGAGTCAAGGCGCACCGTCCTCGTCAGGCGCCTGTCCCTGAG
CCCGAGCCTGCCCCAGGCTGGGCACCCGGTACTCGCAAGATCAATGATGGCACTCCTTGGAAAGGAGGAAGGTAT
CTCTAA
Gene >Pro_DTO377G3_2|g9181.t1
ATGCCTCCGCGACGGAAACGGCTCCCTGCGAGCCCATTTGCACGGGGATACACACCCCAAATGAGAGCGGCGTCA
GTTAACCCTATCTCACTCTAGGAAGCAAGATGGTCGCTAACAAAATATCGATAGCGTGGACCGAATTCCAATCCC
AAACGAGTCAGTATTCTCATCAGTCTTGGCCTTCAACTGCTCACCGTCATAGAATTAAATGCTGCGTCTGCAAGC
GGCATCGCCCACAGTCCCAGTACTCGAAAAACCAACTGGGCTACCTCCGCCGGGCAATGTTCGATCTTGGCTACA
ATAGCATTTATGACCAGCAGGTTGCTAAGTGTGGCCCATGCACGAATGCCCAGGTTTGTGAGGAGCTCTGTCATC
GTTGCGGTCACTACCGTGCCATTGACCAATTCGCCAGAAACCAACGCAATCGCGACAGTCCGGTATGTTTGTCGT
GAGCTACGCACTTTGGCTGCTTCTAATACTTGGTCGATCTGATAGATCTGCCAGCCCTGCATGAACTACCAGATG
TCCCTCGATCCTGCCGATCAGCCTCTGGCGATCACGGACAAAACCGTGGTTGAGGATCAGGTAGAGGATGAGGAT
GAGGATGAGGATGAGGAAGAGGAGCTCAATTCTGAGTCTGTGGGCCATTTTGGATCCATTGGACAACCCGAGTCT
GTCGATATCTTTGGCTCTACTGGTCAGGCCGTAAGTTATCAGAACGACATCAGCTCTGGTCAAGTCTTGGTTTAC
TCATACTTTGAATGCAGGAGAGTTTAGAGCAGGGCATCGAGACAGCTCTCGTCCTGCACGATGATTCCACTGATA
GTGATGGCAATGAGAGCCGGAACGGATTTGCAAGAGTCAAGGTGGGTGCCTCCATTTAACAGAACTTATATCGCT
CCGGATGGACTTCTAACAAAACTTTATTGTATAGGCGCACCGTCCTCGTCAGGCGCCTGTCCCTGAGCCCGAGCC
TGCCCCAGGCTGGGCACCCGGTACTCGCAAGATCAATGATGGCACTCCTTGGAAAGGAGGAAGGTATCTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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