Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9168.t1
Gene name
Locationscaffold_42:150748..151246
Strand+
Gene length (bp)498
Transcript length (bp)498
Coding sequence length (bp)498
Protein length (aa) 166

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08636 Pkr1 ER protein Pkr1 1.4E-30 2 73

GO

GO Term Description Terminal node
GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly Yes
GO:0008150 biological_process No
GO:0043933 protein-containing complex organization No
GO:0009987 cellular process No
GO:0070070 proton-transporting V-type ATPase complex assembly No
GO:0016043 cellular component organization No
GO:0065003 protein-containing complex assembly No
GO:0070071 proton-transporting two-sector ATPase complex assembly No
GO:0071840 cellular component organization or biogenesis No
GO:0022607 cellular component assembly No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 44 66 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9168.t1
MASFMEDLWSSIFTPGPTPTLLIATNVTFAALQLIFLVLLLATYSLHFVALSIISGGLWWSINWFAAEVRLAQQA
QEAEKEKQGSEGDAKTRKSPAVRESADSETETEVLVARKTDDKSAPVATGSATSGLMPTARDPKKRLSTGDGSGY
GSTDSEWEKVDDTQS*
Coding >Pro_DTO377G3_2|g9168.t1
ATGGCTTCCTTCATGGAAGACCTGTGGTCGAGCATCTTTACCCCAGGACCCACTCCAACCCTTTTGATTGCGACC
AACGTCACTTTCGCCGCACTCCAGCTTATCTTCCTTGTCCTCCTCTTAGCCACCTACAGCCTCCATTTCGTCGCC
CTGTCCATCATCAGCGGTGGACTATGGTGGTCCATCAACTGGTTCGCTGCCGAGGTTCGACTGGCCCAGCAGGCG
CAGGAAGCGGAGAAAGAAAAACAAGGGTCGGAGGGTGACGCGAAAACGCGGAAGAGTCCCGCTGTAAGAGAAAGC
GCCGACAGCGAAACTGAAACCGAAGTCCTTGTCGCTAGGAAGACAGACGATAAGTCTGCTCCTGTCGCGACTGGG
AGTGCAACGTCCGGGTTGATGCCCACGGCGCGCGATCCTAAGAAGCGGCTCAGCACTGGGGATGGGTCGGGCTAT
GGGAGCACTGATAGCGAGTGGGAGAAGGTTGATGATACTCAATCTTGA
Transcript >Pro_DTO377G3_2|g9168.t1
ATGGCTTCCTTCATGGAAGACCTGTGGTCGAGCATCTTTACCCCAGGACCCACTCCAACCCTTTTGATTGCGACC
AACGTCACTTTCGCCGCACTCCAGCTTATCTTCCTTGTCCTCCTCTTAGCCACCTACAGCCTCCATTTCGTCGCC
CTGTCCATCATCAGCGGTGGACTATGGTGGTCCATCAACTGGTTCGCTGCCGAGGTTCGACTGGCCCAGCAGGCG
CAGGAAGCGGAGAAAGAAAAACAAGGGTCGGAGGGTGACGCGAAAACGCGGAAGAGTCCCGCTGTAAGAGAAAGC
GCCGACAGCGAAACTGAAACCGAAGTCCTTGTCGCTAGGAAGACAGACGATAAGTCTGCTCCTGTCGCGACTGGG
AGTGCAACGTCCGGGTTGATGCCCACGGCGCGCGATCCTAAGAAGCGGCTCAGCACTGGGGATGGGTCGGGCTAT
GGGAGCACTGATAGCGAGTGGGAGAAGGTTGATGATACTCAATCTTGA
Gene >Pro_DTO377G3_2|g9168.t1
ATGGCTTCCTTCATGGAAGACCTGTGGTCGAGCATCTTTACCCCAGGACCCACTCCAACCCTTTTGATTGCGACC
AACGTCACTTTCGCCGCACTCCAGCTTATCTTCCTTGTCCTCCTCTTAGCCACCTACAGCCTCCATTTCGTCGCC
CTGTCCATCATCAGCGGTGGACTATGGTGGTCCATCAACTGGTTCGCTGCCGAGGTTCGACTGGCCCAGCAGGCG
CAGGAAGCGGAGAAAGAAAAACAAGGGTCGGAGGGTGACGCGAAAACGCGGAAGAGTCCCGCTGTAAGAGAAAGC
GCCGACAGCGAAACTGAAACCGAAGTCCTTGTCGCTAGGAAGACAGACGATAAGTCTGCTCCTGTCGCGACTGGG
AGTGCAACGTCCGGGTTGATGCCCACGGCGCGCGATCCTAAGAAGCGGCTCAGCACTGGGGATGGGTCGGGCTAT
GGGAGCACTGATAGCGAGTGGGAGAAGGTTGATGATACTCAATCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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