Protein ID | Pro_DTO377G3_2|g9152.t1 |
Gene name | |
Location | scaffold_42:104886..106659 |
Strand | + |
Gene length (bp) | 1773 |
Transcript length (bp) | 1719 |
Coding sequence length (bp) | 1719 |
Protein length (aa) | 573 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04677 | CwfJ_C_1 | Protein similar to CwfJ C-terminus 1 | 9.4E-24 | 309 | 441 |
PF04676 | CwfJ_C_2 | Protein similar to CwfJ C-terminus 2 | 2.1E-15 | 506 | 566 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 47 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g9152.t1 MAPKCIVIGSLNGQIRPLFSKLAKLQLKQHFSFAIILGDLFGDGSTEDELTDITALLQGNITVACPTYFTLGNRP LPPQVVEKIEATDEVCPNLFFLGKRGTLKTTDGIRIVALGGTIGEAEGRSKPESNASGKFQPTYSESDARALFGI HKTDILITNQWPKDVRLGSNCEVSGDKETVPSELQCIADVCATLKPRYHFSRSDGAFFEREPFFHMPAEDENTYQ LTRFISLPTFGSTKNAIYAFSLDPTAPFPTSIPTGSTICPWSAAQSRRKMLPSQNESYQRYAPSDRDRDPGHQRR HKERAPPPGPENCFFCLSNPNIATHLITSIGNDSYITTAKGPLPTTDFFPSLGFPGHMLIIPFEHCPTIDLIFDP ATRASTFAEMQRYRESLHQMLNERSGGKLGAVTWEVSRSNGIHTHWQFLPMPVEKIRSRLVEMAFKKEASNLEYS TFKTVPNPDEMHNHHMIDYFRVFIWTPALSSEAEAEADNWSSPEHKGVWKTESGEENVIIMKILPETRFDLQFGR RVMGKVLYLDDRINWRDCVQTDDEETKDAEAFKEAFKKHDFAMEVEE* |
Coding | >Pro_DTO377G3_2|g9152.t1 ATGGCTCCCAAATGTATTGTCATTGGCAGCTTAAACGGTCAGATACGGCCTTTGTTCAGCAAGTTAGCCAAGCTG CAGCTAAAACAACATTTCTCCTTTGCGATCATTCTTGGCGACCTCTTCGGTGATGGGTCAACTGAAGACGAGCTC ACTGATATTACCGCATTGCTACAAGGGAACATTACTGTGGCGTGCCCAACCTACTTCACGCTTGGTAACCGACCA CTTCCCCCTCAGGTGGTCGAAAAGATTGAAGCAACTGATGAAGTGTGTCCCAATTTGTTCTTCCTGGGAAAGCGA GGAACCTTGAAGACAACAGATGGTATCCGTATTGTGGCCCTCGGTGGAACCATAGGAGAGGCAGAGGGTAGATCC AAACCCGAGAGCAATGCTAGCGGCAAGTTCCAACCCACATACAGTGAATCTGATGCTCGTGCACTGTTCGGCATT CACAAAACCGACATTCTTATCACCAACCAATGGCCGAAGGATGTCCGTCTAGGATCTAACTGCGAGGTCTCTGGG GATAAGGAGACTGTGCCATCCGAATTGCAATGCATTGCTGATGTCTGCGCGACTCTGAAACCCCGGTATCACTTT TCTCGGTCAGACGGTGCTTTCTTCGAGCGTGAACCCTTCTTTCACATGCCAGCAGAGGATGAAAATACCTACCAA CTCACTCGGTTCATCTCATTGCCTACTTTCGGCTCGACAAAAAATGCTATTTATGCTTTTAGCTTGGACCCAACA GCACCTTTCCCAACCAGTATCCCCACAGGCTCCACCATTTGCCCTTGGTCGGCGGCGCAAAGTAGACGCAAAATG CTCCCAAGCCAAAATGAATCATACCAGCGCTACGCCCCCTCCGACAGAGATAGAGACCCAGGGCACCAGCGCCGA CACAAAGAACGCGCCCCTCCGCCAGGCCCGGAGAATTGTTTCTTCTGTCTCTCAAATCCCAACATTGCCACCCAT CTCATCACCTCAATCGGCAATGACAGCTACATCACCACCGCCAAAGGACCTTTGCCCACAACCGACTTCTTCCCT TCCCTGGGCTTCCCAGGCCATATGCTCATCATCCCCTTTGAACACTGCCCGACCATCGACCTAATCTTCGACCCG GCCACCCGAGCTTCGACATTTGCCGAGATGCAACGGTACCGCGAATCCCTGCACCAAATGCTGAACGAGCGTTCA GGAGGCAAGCTGGGTGCTGTCACATGGGAAGTCAGCCGCTCAAACGGCATCCACACACATTGGCAATTCCTGCCG ATGCCCGTGGAGAAGATCCGCTCACGCCTTGTGGAAATGGCATTCAAGAAGGAAGCCTCGAACCTAGAATATTCG ACGTTCAAGACCGTGCCAAACCCCGATGAAATGCACAATCATCATATGATCGATTATTTCCGAGTCTTCATTTGG ACGCCTGCGCTCAGCAGTGAAGCCGAAGCCGAAGCCGATAATTGGTCTTCACCTGAGCACAAAGGCGTTTGGAAG ACTGAATCTGGAGAAGAGAATGTTATTATTATGAAAATCCTGCCAGAGACCCGGTTTGATTTGCAATTCGGTCGT CGGGTCATGGGCAAGGTACTCTATTTAGATGACCGTATTAACTGGAGGGATTGTGTGCAGACCGACGACGAGGAG ACGAAAGACGCGGAGGCTTTCAAGGAGGCTTTCAAGAAACATGATTTCGCGATGGAGGTTGAGGAGTGA |
Transcript | >Pro_DTO377G3_2|g9152.t1 ATGGCTCCCAAATGTATTGTCATTGGCAGCTTAAACGGTCAGATACGGCCTTTGTTCAGCAAGTTAGCCAAGCTG CAGCTAAAACAACATTTCTCCTTTGCGATCATTCTTGGCGACCTCTTCGGTGATGGGTCAACTGAAGACGAGCTC ACTGATATTACCGCATTGCTACAAGGGAACATTACTGTGGCGTGCCCAACCTACTTCACGCTTGGTAACCGACCA CTTCCCCCTCAGGTGGTCGAAAAGATTGAAGCAACTGATGAAGTGTGTCCCAATTTGTTCTTCCTGGGAAAGCGA GGAACCTTGAAGACAACAGATGGTATCCGTATTGTGGCCCTCGGTGGAACCATAGGAGAGGCAGAGGGTAGATCC AAACCCGAGAGCAATGCTAGCGGCAAGTTCCAACCCACATACAGTGAATCTGATGCTCGTGCACTGTTCGGCATT CACAAAACCGACATTCTTATCACCAACCAATGGCCGAAGGATGTCCGTCTAGGATCTAACTGCGAGGTCTCTGGG GATAAGGAGACTGTGCCATCCGAATTGCAATGCATTGCTGATGTCTGCGCGACTCTGAAACCCCGGTATCACTTT TCTCGGTCAGACGGTGCTTTCTTCGAGCGTGAACCCTTCTTTCACATGCCAGCAGAGGATGAAAATACCTACCAA CTCACTCGGTTCATCTCATTGCCTACTTTCGGCTCGACAAAAAATGCTATTTATGCTTTTAGCTTGGACCCAACA GCACCTTTCCCAACCAGTATCCCCACAGGCTCCACCATTTGCCCTTGGTCGGCGGCGCAAAGTAGACGCAAAATG CTCCCAAGCCAAAATGAATCATACCAGCGCTACGCCCCCTCCGACAGAGATAGAGACCCAGGGCACCAGCGCCGA CACAAAGAACGCGCCCCTCCGCCAGGCCCGGAGAATTGTTTCTTCTGTCTCTCAAATCCCAACATTGCCACCCAT CTCATCACCTCAATCGGCAATGACAGCTACATCACCACCGCCAAAGGACCTTTGCCCACAACCGACTTCTTCCCT TCCCTGGGCTTCCCAGGCCATATGCTCATCATCCCCTTTGAACACTGCCCGACCATCGACCTAATCTTCGACCCG GCCACCCGAGCTTCGACATTTGCCGAGATGCAACGGTACCGCGAATCCCTGCACCAAATGCTGAACGAGCGTTCA GGAGGCAAGCTGGGTGCTGTCACATGGGAAGTCAGCCGCTCAAACGGCATCCACACACATTGGCAATTCCTGCCG ATGCCCGTGGAGAAGATCCGCTCACGCCTTGTGGAAATGGCATTCAAGAAGGAAGCCTCGAACCTAGAATATTCG ACGTTCAAGACCGTGCCAAACCCCGATGAAATGCACAATCATCATATGATCGATTATTTCCGAGTCTTCATTTGG ACGCCTGCGCTCAGCAGTGAAGCCGAAGCCGAAGCCGATAATTGGTCTTCACCTGAGCACAAAGGCGTTTGGAAG ACTGAATCTGGAGAAGAGAATGTTATTATTATGAAAATCCTGCCAGAGACCCGGTTTGATTTGCAATTCGGTCGT CGGGTCATGGGCAAGGTACTCTATTTAGATGACCGTATTAACTGGAGGGATTGTGTGCAGACCGACGACGAGGAG ACGAAAGACGCGGAGGCTTTCAAGGAGGCTTTCAAGAAACATGATTTCGCGATGGAGGTTGAGGAGTGA |
Gene | >Pro_DTO377G3_2|g9152.t1 ATGGCTCCCAAATGGTATGTATGTTTAGGTCTGCATGTATTCCAGTCTCTAACCAAATCTATATGTAGTATTGTC ATTGGCAGCTTAAACGGTCAGATACGGCCTTTGTTCAGCAAGTTAGCCAAGCTGCAGCTAAAACAACATTTCTCC TTTGCGATCATTCTTGGCGACCTCTTCGGTGATGGGTCAACTGAAGACGAGCTCACTGATATTACCGCATTGCTA CAAGGGAACATTACTGTGGCGTGCCCAACCTACTTCACGCTTGGTAACCGACCACTTCCCCCTCAGGTGGTCGAA AAGATTGAAGCAACTGATGAAGTGTGTCCCAATTTGTTCTTCCTGGGAAAGCGAGGAACCTTGAAGACAACAGAT GGTATCCGTATTGTGGCCCTCGGTGGAACCATAGGAGAGGCAGAGGGTAGATCCAAACCCGAGAGCAATGCTAGC GGCAAGTTCCAACCCACATACAGTGAATCTGATGCTCGTGCACTGTTCGGCATTCACAAAACCGACATTCTTATC ACCAACCAATGGCCGAAGGATGTCCGTCTAGGATCTAACTGCGAGGTCTCTGGGGATAAGGAGACTGTGCCATCC GAATTGCAATGCATTGCTGATGTCTGCGCGACTCTGAAACCCCGGTATCACTTTTCTCGGTCAGACGGTGCTTTC TTCGAGCGTGAACCCTTCTTTCACATGCCAGCAGAGGATGAAAATACCTACCAACTCACTCGGTTCATCTCATTG CCTACTTTCGGCTCGACAAAAAATGCTATTTATGCTTTTAGCTTGGACCCAACAGCACCTTTCCCAACCAGTATC CCCACAGGCTCCACCATTTGCCCTTGGTCGGCGGCGCAAAGTAGACGCAAAATGCTCCCAAGCCAAAATGAATCA TACCAGCGCTACGCCCCCTCCGACAGAGATAGAGACCCAGGGCACCAGCGCCGACACAAAGAACGCGCCCCTCCG CCAGGCCCGGAGAATTGTTTCTTCTGTCTCTCAAATCCCAACATTGCCACCCATCTCATCACCTCAATCGGCAAT GACAGCTACATCACCACCGCCAAAGGACCTTTGCCCACAACCGACTTCTTCCCTTCCCTGGGCTTCCCAGGCCAT ATGCTCATCATCCCCTTTGAACACTGCCCGACCATCGACCTAATCTTCGACCCGGCCACCCGAGCTTCGACATTT GCCGAGATGCAACGGTACCGCGAATCCCTGCACCAAATGCTGAACGAGCGTTCAGGAGGCAAGCTGGGTGCTGTC ACATGGGAAGTCAGCCGCTCAAACGGCATCCACACACATTGGCAATTCCTGCCGATGCCCGTGGAGAAGATCCGC TCACGCCTTGTGGAAATGGCATTCAAGAAGGAAGCCTCGAACCTAGAATATTCGACGTTCAAGACCGTGCCAAAC CCCGATGAAATGCACAATCATCATATGATCGATTATTTCCGAGTCTTCATTTGGACGCCTGCGCTCAGCAGTGAA GCCGAAGCCGAAGCCGATAATTGGTCTTCACCTGAGCACAAAGGCGTTTGGAAGACTGAATCTGGAGAAGAGAAT GTTATTATTATGAAAATCCTGCCAGAGACCCGGTTTGATTTGCAATTCGGTCGTCGGGTCATGGGCAAGGTACTC TATTTAGATGACCGTATTAACTGGAGGGATTGTGTGCAGACCGACGACGAGGAGACGAAAGACGCGGAGGCTTTC AAGGAGGCTTTCAAGAAACATGATTTCGCGATGGAGGTTGAGGAGTGA |