Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9148.t1
Gene name
Locationscaffold_42:91483..92355
Strand+
Gene length (bp)872
Transcript length (bp)810
Coding sequence length (bp)810
Protein length (aa) 270

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16922 SLD5_C DNA replication complex GINS protein SLD5 C-terminus 4.9E-14 212 269
PF05916 Sld5 GINS complex protein 8.5E-09 40 124

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9148.t1
MDIDDILASVDRGPGASLESAALDHQLLTRFWVAERAVSEVLPWPAPLMERIMDRVRIQIETIEDLAASSETTPT
TGNTHNPNLNLRLSILQTDLARSQYIVRSLLRARLAKITKYSMHYLVLLASRNKNPLASQTQSTASSQNPNQQPE
DSVPDISELTDLAPLSEPESSFLHAHQTLLAGHYAGSFMGAFPRQLRRLDDNAGGTSMIQGPELKEVVFVRCLGV
EVPVVVGGEDEEYDTGVTMRMGDVWVVRWEGVKAAWGRGEVELL*
Coding >Pro_DTO377G3_2|g9148.t1
ATGGATATCGACGACATTCTCGCGTCAGTGGATCGCGGTCCAGGCGCCAGCCTGGAATCCGCAGCGCTAGATCAC
CAGCTCCTCACGCGCTTCTGGGTAGCTGAACGCGCCGTGTCGGAGGTACTACCGTGGCCGGCGCCACTGATGGAG
CGCATAATGGATCGCGTGCGGATACAGATCGAAACAATCGAAGACCTAGCCGCATCCTCAGAAACAACCCCAACA
ACCGGAAACACGCACAACCCCAATCTCAACCTCCGCCTCTCAATCCTCCAAACCGACCTCGCCCGCAGTCAATAC
ATAGTACGCAGTCTTCTGCGAGCCAGACTGGCCAAAATAACAAAATACAGCATGCACTATCTAGTCCTGCTCGCC
TCGCGCAACAAAAACCCCCTCGCATCGCAAACACAATCAACCGCCTCCTCACAGAACCCGAACCAGCAGCCCGAG
GACTCCGTGCCGGACATATCAGAGCTGACGGATCTTGCGCCGCTGTCGGAGCCGGAATCGTCGTTCCTGCATGCG
CACCAGACGCTCCTGGCGGGCCACTATGCGGGGTCGTTCATGGGCGCGTTCCCGCGGCAGCTGAGGCGGTTGGAT
GATAATGCCGGTGGGACGAGTATGATCCAGGGGCCAGAGTTGAAAGAGGTTGTTTTTGTTCGGTGTCTTGGGGTG
GAAGTTCCTGTTGTTGTTGGAGGGGAGGACGAGGAATATGATACGGGGGTTACGATGCGAATGGGGGATGTTTGG
GTTGTGAGATGGGAAGGAGTTAAGGCGGCTTGGGGAAGAGGGGAGGTGGAATTATTGTGA
Transcript >Pro_DTO377G3_2|g9148.t1
ATGGATATCGACGACATTCTCGCGTCAGTGGATCGCGGTCCAGGCGCCAGCCTGGAATCCGCAGCGCTAGATCAC
CAGCTCCTCACGCGCTTCTGGGTAGCTGAACGCGCCGTGTCGGAGGTACTACCGTGGCCGGCGCCACTGATGGAG
CGCATAATGGATCGCGTGCGGATACAGATCGAAACAATCGAAGACCTAGCCGCATCCTCAGAAACAACCCCAACA
ACCGGAAACACGCACAACCCCAATCTCAACCTCCGCCTCTCAATCCTCCAAACCGACCTCGCCCGCAGTCAATAC
ATAGTACGCAGTCTTCTGCGAGCCAGACTGGCCAAAATAACAAAATACAGCATGCACTATCTAGTCCTGCTCGCC
TCGCGCAACAAAAACCCCCTCGCATCGCAAACACAATCAACCGCCTCCTCACAGAACCCGAACCAGCAGCCCGAG
GACTCCGTGCCGGACATATCAGAGCTGACGGATCTTGCGCCGCTGTCGGAGCCGGAATCGTCGTTCCTGCATGCG
CACCAGACGCTCCTGGCGGGCCACTATGCGGGGTCGTTCATGGGCGCGTTCCCGCGGCAGCTGAGGCGGTTGGAT
GATAATGCCGGTGGGACGAGTATGATCCAGGGGCCAGAGTTGAAAGAGGTTGTTTTTGTTCGGTGTCTTGGGGTG
GAAGTTCCTGTTGTTGTTGGAGGGGAGGACGAGGAATATGATACGGGGGTTACGATGCGAATGGGGGATGTTTGG
GTTGTGAGATGGGAAGGAGTTAAGGCGGCTTGGGGAAGAGGGGAGGTGGAATTATTGTGA
Gene >Pro_DTO377G3_2|g9148.t1
ATGGATATCGACGACATTCTCGCGTCAGTGGATCGCGGTCCAGGCGCCAGCCTGGAATCCGCAGCGCTAGATCAC
CAGCTCCTCACGCGCTTCTGGGTAGCTGAACGCGCCGTGTCGGAGGTACTACCGTGGCCGGCGCCACTGATGGAG
CGCATAATGGATCGCGTGCGGATACAGGTACACAGCACCTTCACAGCACTCCCTAAATCCAAATCACTAATGAAA
CCAAATACCTACAGATCGAAACAATCGAAGACCTAGCCGCATCCTCAGAAACAACCCCAACAACCGGAAACACGC
ACAACCCCAATCTCAACCTCCGCCTCTCAATCCTCCAAACCGACCTCGCCCGCAGTCAATACATAGTACGCAGTC
TTCTGCGAGCCAGACTGGCCAAAATAACAAAATACAGCATGCACTATCTAGTCCTGCTCGCCTCGCGCAACAAAA
ACCCCCTCGCATCGCAAACACAATCAACCGCCTCCTCACAGAACCCGAACCAGCAGCCCGAGGACTCCGTGCCGG
ACATATCAGAGCTGACGGATCTTGCGCCGCTGTCGGAGCCGGAATCGTCGTTCCTGCATGCGCACCAGACGCTCC
TGGCGGGCCACTATGCGGGGTCGTTCATGGGCGCGTTCCCGCGGCAGCTGAGGCGGTTGGATGATAATGCCGGTG
GGACGAGTATGATCCAGGGGCCAGAGTTGAAAGAGGTTGTTTTTGTTCGGTGTCTTGGGGTGGAAGTTCCTGTTG
TTGTTGGAGGGGAGGACGAGGAATATGATACGGGGGTTACGATGCGAATGGGGGATGTTTGGGTTGTGAGATGGG
AAGGAGTTAAGGCGGCTTGGGGAAGAGGGGAGGTGGAATTATTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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