Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9147.t1
Gene name
Locationscaffold_42:90268..90835
Strand+
Gene length (bp)567
Transcript length (bp)456
Coding sequence length (bp)456
Protein length (aa) 152

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12273 RCR Chitin synthesis regulation, resistance to Congo red 7.9E-22 27 146

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.5

Transmembrane Domains

Domain # Start End Length
1 28 50 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9147.t1
MPALYPRYCSGYFGDNDCYSTWDSWGRWVAFAVIVGVAFLIFFGFACFNARRRRNHGQRPLTGTGWMAPPPGPPP
PNQPIYQQPPYGDPYYQQNAPPQYTPNPQNYGYFGAQNAPPQQQGIELQQPPNAYTANSPHGYAPPPGPPPNGNK
D*
Coding >Pro_DTO377G3_2|g9147.t1
ATGCCAGCCCTATATCCTCGATACTGCTCTGGTTACTTTGGGGATAATGACTGCTATTCCACCTGGGACTCTTGG
GGTCGCTGGGTAGCGTTCGCCGTGATCGTCGGTGTAGCCTTCCTAATCTTCTTCGGTTTCGCATGCTTCAACGCA
CGCCGTCGCCGAAATCATGGCCAACGCCCTCTCACAGGAACGGGATGGATGGCTCCTCCTCCGGGCCCTCCTCCG
CCAAATCAACCCATCTACCAGCAACCCCCATATGGCGACCCCTACTACCAGCAAAATGCGCCCCCTCAATACACC
CCGAACCCTCAGAACTACGGCTACTTTGGTGCGCAAAACGCACCACCACAACAGCAAGGCATCGAGTTGCAGCAG
CCTCCGAATGCGTACACTGCCAACAGTCCCCACGGATATGCGCCGCCTCCTGGTCCGCCGCCCAACGGCAATAAG
GACTAA
Transcript >Pro_DTO377G3_2|g9147.t1
ATGCCAGCCCTATATCCTCGATACTGCTCTGGTTACTTTGGGGATAATGACTGCTATTCCACCTGGGACTCTTGG
GGTCGCTGGGTAGCGTTCGCCGTGATCGTCGGTGTAGCCTTCCTAATCTTCTTCGGTTTCGCATGCTTCAACGCA
CGCCGTCGCCGAAATCATGGCCAACGCCCTCTCACAGGAACGGGATGGATGGCTCCTCCTCCGGGCCCTCCTCCG
CCAAATCAACCCATCTACCAGCAACCCCCATATGGCGACCCCTACTACCAGCAAAATGCGCCCCCTCAATACACC
CCGAACCCTCAGAACTACGGCTACTTTGGTGCGCAAAACGCACCACCACAACAGCAAGGCATCGAGTTGCAGCAG
CCTCCGAATGCGTACACTGCCAACAGTCCCCACGGATATGCGCCGCCTCCTGGTCCGCCGCCCAACGGCAATAAG
GACTAA
Gene >Pro_DTO377G3_2|g9147.t1
ATGCCAGCCCTATATCCTCGATACTGGTAGGTGCTATGATGACTCCCGTCAAGAGACATATCACTGATCCGTTAC
AGCTCTGGTTACTTTGGGGATAATGACTGCTATTCCACCTGGGACTCTTGGGGTCGCTGGGTAGCGTTCGCCGTG
ATCGTCGGTGTAGCCTTCCTAATCTTCTTCGGTTTCGCGTGAGTCTTACCTAATTCTCTTCTATGCGATGTCTCG
CGATTTTAACAAGCTTGTCACAGATGCTTCAACGCACGCCGTCGCCGAAATCATGGCCAACGCCCTCTCACAGGA
ACGGGATGGATGGCTCCTCCTCCGGGCCCTCCTCCGCCAAATCAACCCATCTACCAGCAACCCCCATATGGCGAC
CCCTACTACCAGCAAAATGCGCCCCCTCAATACACCCCGAACCCTCAGAACTACGGCTACTTTGGTGCGCAAAAC
GCACCACCACAACAGCAAGGCATCGAGTTGCAGCAGCCTCCGAATGCGTACACTGCCAACAGTCCCCACGGATAT
GCGCCGCCTCCTGGTCCGCCGCCCAACGGCAATAAGGACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail