© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g9132.t1 |
| Gene name | |
| Location | scaffold_42:49981..51426 |
| Strand | + |
| Gene length (bp) | 1445 |
| Transcript length (bp) | 1200 |
| Coding sequence length (bp) | 1200 |
| Protein length (aa) | 400 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00108 | Thiolase_N | Thiolase, N-terminal domain | 4.3E-92 | 7 | 268 |
| PF02803 | Thiolase_C | Thiolase, C-terminal domain | 2.3E-43 | 276 | 397 |
| PF00109 | ketoacyl-synt | Beta-ketoacyl synthase, N-terminal domain | 4.5E-06 | 87 | 134 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016746 | transferase activity, transferring acyl groups | No |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g9132.t1 MSSLPPVYIVSTARTPVGSFLGSLSSLTAPQLGAHAIKAAVERAEGINASDVEEVFFGNVLSAGVGQNPARQCAL GAGLTDSTICTTVNKVCASGLKAIILGAQTIMTGNADIVVAGGTESMSNTPHYLQTSRSGTKFGSQALVDGIQND GLTDAYGKHDLMGVAAEECAAEHGFNRTQQDDYAIRSYEKAQAAQKSGAFDNEIAPIEIPGFRGKPGVTVSRDEE PKNLNPEKLRAIKPAFIPGTGTVTAPNSSPLNDGSAAVVLVSEAKVKELGLKPIAKILGWGDAEQQPSKFTTAPA LAIPKALKHAGVSQESIDAFEINEAFSVVALANMKLLGLSEDKVNIHGGAVAIGHPLGASGARIVSTLLGVLSAK EGKLGCVGICNGGGGASALVIESL* |
| Coding | >Pro_DTO377G3_2|g9132.t1 ATGTCTTCTCTTCCTCCTGTCTACATTGTTTCTACTGCCCGTACTCCCGTGGGCTCTTTCCTGGGCTCCCTGTCT AGCTTGACTGCTCCTCAGCTTGGTGCACATGCCATTAAGGCCGCTGTTGAACGGGCCGAGGGTATCAATGCCTCT GACGTTGAGGAAGTCTTCTTCGGTAACGTCTTGTCTGCTGGTGTTGGACAAAATCCCGCCAGACAGTGCGCCCTC GGTGCTGGCCTTACCGATTCTACCATCTGCACTACTGTCAACAAGGTCTGTGCTTCTGGCCTGAAGGCCATCATT CTTGGTGCCCAGACTATCATGACCGGAAACGCGGATATTGTTGTCGCTGGTGGTACCGAGTCCATGTCTAACACC CCTCACTATCTGCAAACATCTCGCAGCGGTACCAAGTTTGGTAGCCAGGCCCTAGTTGACGGCATCCAGAATGAT GGTTTGACTGATGCCTACGGCAAGCACGATCTCATGGGTGTTGCGGCCGAGGAGTGTGCCGCGGAGCACGGCTTC AACCGTACTCAGCAGGATGACTATGCTATCCGCAGCTATGAGAAGGCCCAGGCTGCCCAGAAGTCCGGTGCATTT GACAACGAGATTGCCCCTATTGAGATCCCCGGCTTCCGTGGCAAGCCTGGCGTGACTGTTTCCCGGGATGAGGAA CCCAAGAACCTCAACCCTGAGAAGCTCCGCGCTATAAAGCCCGCCTTCATTCCGGGAACTGGAACCGTGACCGCC CCCAACTCTTCGCCCCTGAACGATGGTTCTGCAGCCGTTGTCTTGGTTTCGGAGGCTAAGGTGAAGGAGCTGGGC CTCAAGCCTATTGCCAAGATTCTAGGTTGGGGAGATGCTGAGCAACAGCCCAGCAAGTTCACTACTGCTCCTGCT TTGGCTATCCCCAAGGCTCTCAAGCACGCCGGTGTGAGCCAGGAGTCCATCGATGCCTTTGAGATCAACGAGGCC TTCAGTGTTGTGGCTCTTGCCAATATGAAGCTCCTTGGTCTCTCTGAGGATAAGGTCAACATCCACGGTGGTGCA GTCGCCATTGGACACCCTCTTGGTGCCAGTGGTGCCCGTATTGTGTCTACCTTGCTCGGTGTCTTGAGCGCCAAG GAGGGCAAGCTTGGCTGCGTCGGCATCTGCAACGGTGGCGGCGGTGCCAGCGCCCTGGTTATTGAGTCTCTTTAA |
| Transcript | >Pro_DTO377G3_2|g9132.t1 ATGTCTTCTCTTCCTCCTGTCTACATTGTTTCTACTGCCCGTACTCCCGTGGGCTCTTTCCTGGGCTCCCTGTCT AGCTTGACTGCTCCTCAGCTTGGTGCACATGCCATTAAGGCCGCTGTTGAACGGGCCGAGGGTATCAATGCCTCT GACGTTGAGGAAGTCTTCTTCGGTAACGTCTTGTCTGCTGGTGTTGGACAAAATCCCGCCAGACAGTGCGCCCTC GGTGCTGGCCTTACCGATTCTACCATCTGCACTACTGTCAACAAGGTCTGTGCTTCTGGCCTGAAGGCCATCATT CTTGGTGCCCAGACTATCATGACCGGAAACGCGGATATTGTTGTCGCTGGTGGTACCGAGTCCATGTCTAACACC CCTCACTATCTGCAAACATCTCGCAGCGGTACCAAGTTTGGTAGCCAGGCCCTAGTTGACGGCATCCAGAATGAT GGTTTGACTGATGCCTACGGCAAGCACGATCTCATGGGTGTTGCGGCCGAGGAGTGTGCCGCGGAGCACGGCTTC AACCGTACTCAGCAGGATGACTATGCTATCCGCAGCTATGAGAAGGCCCAGGCTGCCCAGAAGTCCGGTGCATTT GACAACGAGATTGCCCCTATTGAGATCCCCGGCTTCCGTGGCAAGCCTGGCGTGACTGTTTCCCGGGATGAGGAA CCCAAGAACCTCAACCCTGAGAAGCTCCGCGCTATAAAGCCCGCCTTCATTCCGGGAACTGGAACCGTGACCGCC CCCAACTCTTCGCCCCTGAACGATGGTTCTGCAGCCGTTGTCTTGGTTTCGGAGGCTAAGGTGAAGGAGCTGGGC CTCAAGCCTATTGCCAAGATTCTAGGTTGGGGAGATGCTGAGCAACAGCCCAGCAAGTTCACTACTGCTCCTGCT TTGGCTATCCCCAAGGCTCTCAAGCACGCCGGTGTGAGCCAGGAGTCCATCGATGCCTTTGAGATCAACGAGGCC TTCAGTGTTGTGGCTCTTGCCAATATGAAGCTCCTTGGTCTCTCTGAGGATAAGGTCAACATCCACGGTGGTGCA GTCGCCATTGGACACCCTCTTGGTGCCAGTGGTGCCCGTATTGTGTCTACCTTGCTCGGTGTCTTGAGCGCCAAG GAGGGCAAGCTTGGCTGCGTCGGCATCTGCAACGGTGGCGGCGGTGCCAGCGCCCTGGTTATTGAGTCTCTTTAA |
| Gene | >Pro_DTO377G3_2|g9132.t1 ATGTCTTCTCTTCCTCCTGTCTACATTGTTTCTACTGCCCGTACTCCCGTGGGCTCTTTCCTGGGGTGAGCATGC TTGCATTCGTCTTTTCCCCCTTGAAGACTTGATCTGACATCGGTTACTGTAGCTCCCTGTCTAGCTTGACTGCTC CTCAGCTTGGTGCACATGCCATTAAGGGTAGGGCATATACCCCAAGCTATACTATACCTATTTTCAATGCTAATA GTAACTTGCAGCCGCTGTTGAACGGGCCGAGGGTATCAATGCCTCTGACGTTGAGGAAGTCTTCTTCGGTAACGT CTTGTCTGCTGGGTAAGTTATCTTTGCTACATCTTATACTGCAATTGAGATTGACGTATTCCTTATAGTGTTGGA CAAAATCCCGCCAGACAGTGCGCCCTCGGTGCTGGCCTTACCGATTCTACCATCTGCACTACTGTCAACAAGGTC TGTGCTTCTGGCCTGAAGGCCATCATTCTTGGTGCCCAGACTATCATGACCGGAAACGCGGATATTGTTGTCGCT GGTGGTACCGAGTCCATGTCTAACACCCCTCACTATCTGCAAACATCTCGCAGCGGTACCAAGTTTGGTAGCCAG GCCCTAGTTGACGGCATCCAGAATGATGGTTTGACTGATGCCTACGGCAAGCACGATCTCATGGGTGTTGCGGCC GAGGAGTGTGCCGCGGAGCACGGCTTCAACCGTACTCAGCAGGATGACTATGCTATCCGCAGCTATGAGAAGGCC CAGGCTGCCCAGAAGTCCGGTGCATTTGACAACGAGATTGCCCCTATTGAGATCCCCGGCTTCCGTGGCAAGCCT GGCGTGACTGTTTCCCGGGATGAGGAACCCAAGAACGTGAGTTCCTCTTGTTCTCTGCGTTAGATTTATTGTGAC GTTCATTGACCGTTCTTTGCGACTTATAGCTCAACCCTGAGAAGCTCCGCGCTATAAAGCCCGCCTTCATTCCGG GAACTGGAACCGTGACCGCCCCCAACTCTTCGCCCCTGAACGATGGTTCTGCAGCCGTTGTCTTGGTTTCGGAGG CTAAGGTGAAGGAGCTGGGCCTCAAGCCTATTGCCAAGATTCTAGGTTGGGGAGATGCTGAGCAACAGCCCAGCA AGTTCACTACTGCTCCTGCTTTGGCTATCCCCAAGGCTCTCAAGCACGCCGGTGTGAGCCAGGAGTCCATCGATG CCTTTGAGATCAACGAGGCCTTCAGTGTTGTGGCTCTTGCCAATATGAAGCTCCTTGGTCTCTCTGAGGATAAGG TCAACATCCACGGTGGTGCAGTCGCCATTGGACACCCTCTTGGTGCCAGTGGTGCCCGTATTGTGTCTACCTTGC TCGGTGTCTTGAGCGCCAAGGAGGGCAAGCTTGGCTGCGTCGGCATCTGCAACGGTGGCGGCGGTGCCAGCGCCC TGGTTATTGAGTCTCTTTAA |