Protein ID | Pro_DTO377G3_2|g9103.t1 |
Gene name | |
Location | scaffold_41:132586..135469 |
Strand | + |
Gene length (bp) | 2883 |
Transcript length (bp) | 2610 |
Coding sequence length (bp) | 2610 |
Protein length (aa) | 870 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00515 | TPR_1 | Tetratricopeptide repeat | 1.4E-06 | 238 | 270 |
PF00515 | TPR_1 | Tetratricopeptide repeat | 5.6E-08 | 345 | 374 |
PF07719 | TPR_2 | Tetratricopeptide repeat | 5.8E-06 | 238 | 270 |
PF07719 | TPR_2 | Tetratricopeptide repeat | 2.0E-05 | 345 | 374 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 2.7E-02 | 60 | 87 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 1.4E-01 | 94 | 126 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 2.1E-06 | 238 | 270 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 1.1E-03 | 309 | 339 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 2.6E-02 | 345 | 374 |
PF13431 | TPR_17 | Tetratricopeptide repeat | 2.7E-05 | 259 | 287 |
PF13432 | TPR_16 | Tetratricopeptide repeat | 1.0E-04 | 243 | 302 |
PF13432 | TPR_16 | Tetratricopeptide repeat | 5.2E-05 | 350 | 411 |
PF13174 | TPR_6 | Tetratricopeptide repeat | 9.5E-03 | 240 | 270 |
PF13174 | TPR_6 | Tetratricopeptide repeat | 5.1E-02 | 311 | 337 |
PF13176 | TPR_7 | Tetratricopeptide repeat | 3.1E-02 | 240 | 271 |
PF12895 | ANAPC3 | Anaphase-promoting complex, cyclosome, subunit 3 | 1.3E-07 | 292 | 368 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 31 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g9103.t1 MSHTQPSPTTGVAPHHAAAHLAHAQAQAQANGHMSAIPVQGQKGVPTLTTAQKIATLNEQVWLQIGSLTELMGDL EGAMNAYEQALRHNQWSISAMNAISCILRTKEQFPKAIEYLQNILKLDPSNGETWGSLGHCHLMMDNLQEAYTSY QQALYHLRDPKEPKLWYGIGILYDRYGSLDHAEEAFSQVMRMAPDFEKANEIYFRLGIIYKQQQKFNQSLECFKY IVSDPPRPLTEEDIWFQIGHVHEQQKDFESAQSAYQRVLERDPNHAKVLQQLGWLYHQQSNAFQSQEKAIQFLEK SVNADNNDAQSWYLLGRCYMSMAKYPKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYRDALDAYSRAIRLNPY ISEVWYDLGTLYESCNNQIADALDAYGRAADLDPSNVHIKARLQLLQSQLSAGTAGQQPPSAPAPQPQDVHPQAY QAPGVGAPPAPQWGAPAPIGPPPQAPAPPRQIPDWNRGINELQSQNQAPPSNGLDQRDARIPGAPAQSPRQEPGR SFPDPRGAPRSPKMGDPNSYPPPHTLPQLGNAPGPSHERAPSGSNAFGAPRGALPSGLPVAPPGPPGPPGPNGGA PPPPYQNRPFSPAPEIRPIREERPSSPGSGYPLQQFHPGPTLPPQVPGGNSIASGAPAPASAATAAEAAARDRED RPASAMKRGREWEADAGPVKKHANEESRARLDDQNNRRPSPPARLPSPGEMQRRSSSEARREDARRANENYHPSE AAHHPPTLPSIQDMPPRPSAGPSLPPMAESSAPAPNAPPTGPPSANTPVKEEAPRPEAPPAHEPPARKMDVDEDY DDEVEEEKKAAASKGSPNGSTAGNPANGAGNARASTPSKIEPTA* |
Coding | >Pro_DTO377G3_2|g9103.t1 ATGTCTCATACTCAACCATCGCCCACCACGGGCGTGGCTCCTCACCATGCCGCAGCGCATCTCGCTCATGCGCAA GCGCAGGCGCAGGCCAATGGTCATATGTCCGCAATTCCCGTGCAAGGTCAAAAGGGAGTCCCTACTCTCACCACC GCGCAAAAGATCGCCACACTCAATGAACAAGTCTGGCTTCAAATAGGAAGCTTGACCGAATTGATGGGCGATCTG GAGGGTGCGATGAATGCCTACGAGCAGGCTCTGCGTCACAACCAGTGGTCTATCTCAGCGATGAATGCCATTTCA TGCATTCTCCGGACAAAGGAGCAGTTTCCAAAAGCAATTGAGTACTTGCAAAATATTTTGAAGTTGGATCCGAGC AATGGCGAGACTTGGGGCAGCCTGGGCCACTGCCATCTTATGATGGATAATTTACAAGAGGCATACACCTCTTAC CAGCAAGCCCTTTACCACTTGCGTGACCCCAAAGAACCCAAGCTGTGGTATGGAATCGGTATATTGTATGATCGC TATGGCTCTCTGGATCACGCGGAAGAGGCTTTCTCGCAAGTGATGCGCATGGCACCTGATTTCGAAAAGGCTAAT GAGATCTACTTCCGCCTGGGAATCATATACAAGCAGCAGCAGAAGTTTAATCAGAGTTTGGAGTGCTTCAAATAC ATTGTTAGCGATCCTCCACGCCCTCTGACCGAAGAAGACATCTGGTTCCAGATTGGCCATGTCCACGAGCAACAG AAAGACTTTGAATCTGCCCAATCCGCGTACCAGCGCGTCCTGGAGCGAGATCCAAACCACGCCAAGGTTCTCCAG CAACTTGGTTGGCTCTATCACCAGCAGAGTAATGCTTTCCAAAGCCAGGAGAAGGCCATTCAGTTCCTGGAAAAG TCGGTCAATGCTGATAACAATGACGCTCAAAGCTGGTATCTCCTTGGTCGTTGCTACATGTCCATGGCGAAATAC CCCAAGGCGTATGAAGCCTATCAGCAAGCGGTCTATCGCGACGGCCGCAACCCTACCTTCTGGTGCTCGATTGGT GTTCTTTACTACCAGATCAACCAATATCGCGATGCCCTCGATGCTTACTCTCGTGCGATCCGCCTGAACCCTTAC ATTTCAGAGGTCTGGTATGACCTGGGCACTTTGTACGAATCATGCAACAACCAGATTGCCGATGCTCTGGATGCC TACGGACGCGCCGCAGATCTTGACCCGAGCAACGTTCACATCAAGGCTCGTCTGCAGCTTCTTCAAAGCCAGTTG TCTGCTGGCACGGCTGGACAACAGCCACCTTCTGCCCCCGCGCCTCAGCCGCAGGATGTTCATCCTCAGGCTTAT CAGGCACCTGGCGTTGGTGCACCTCCAGCTCCTCAGTGGGGTGCACCAGCCCCCATCGGTCCCCCTCCACAAGCT CCTGCACCCCCGAGACAGATTCCTGACTGGAACCGTGGGATCAACGAGCTTCAGTCTCAAAATCAAGCTCCCCCA TCTAACGGCCTTGACCAGCGCGACGCTCGGATCCCCGGTGCTCCCGCTCAAAGCCCTCGACAGGAGCCTGGTCGG TCGTTCCCGGATCCCCGTGGCGCGCCTCGCTCGCCAAAGATGGGTGATCCCAACTCCTACCCGCCGCCTCACACT CTACCCCAGCTTGGAAATGCGCCTGGTCCAAGCCACGAACGCGCTCCTAGTGGCAGCAATGCCTTTGGTGCTCCG CGTGGTGCTCTGCCGAGTGGCCTGCCCGTCGCTCCTCCTGGTCCCCCTGGACCTCCTGGACCCAATGGCGGTGCT CCTCCCCCTCCTTACCAGAACCGCCCTTTCAGTCCTGCTCCTGAGATTCGCCCTATTCGCGAGGAGCGTCCCTCT TCGCCAGGTTCAGGATACCCCCTCCAACAGTTCCACCCCGGTCCTACCCTCCCCCCACAAGTTCCAGGTGGTAAC TCCATCGCCTCTGGTGCCCCGGCCCCTGCTTCGGCTGCCACTGCTGCTGAGGCTGCCGCCCGTGATCGCGAAGAT CGCCCCGCATCTGCAATGAAGCGCGGCCGCGAATGGGAAGCTGATGCTGGCCCAGTCAAGAAGCATGCAAATGAA GAGAGCCGGGCTCGTCTGGATGACCAGAATAACCGCCGCCCGAGCCCACCCGCTCGTTTGCCTTCTCCTGGTGAG ATGCAACGACGAAGCTCCTCAGAGGCCCGCCGCGAGGACGCCCGTCGTGCCAATGAGAACTATCACCCCTCAGAA GCTGCTCACCACCCTCCTACTCTGCCTTCGATCCAAGACATGCCTCCCCGTCCTTCTGCTGGCCCCAGTCTTCCC CCGATGGCCGAGAGCTCTGCACCTGCACCTAACGCTCCCCCCACTGGACCTCCTTCCGCCAACACCCCGGTCAAG GAAGAAGCTCCTCGTCCTGAGGCTCCCCCTGCACACGAGCCCCCCGCGCGTAAGATGGATGTCGATGAAGACTAC GATGATGAAGTTGAGGAAGAGAAGAAGGCTGCTGCTTCTAAGGGCAGCCCCAACGGCAGCACTGCTGGCAACCCC GCCAATGGTGCTGGAAATGCCCGTGCCAGTACTCCATCCAAGATCGAGCCTACGGCATAA |
Transcript | >Pro_DTO377G3_2|g9103.t1 ATGTCTCATACTCAACCATCGCCCACCACGGGCGTGGCTCCTCACCATGCCGCAGCGCATCTCGCTCATGCGCAA GCGCAGGCGCAGGCCAATGGTCATATGTCCGCAATTCCCGTGCAAGGTCAAAAGGGAGTCCCTACTCTCACCACC GCGCAAAAGATCGCCACACTCAATGAACAAGTCTGGCTTCAAATAGGAAGCTTGACCGAATTGATGGGCGATCTG GAGGGTGCGATGAATGCCTACGAGCAGGCTCTGCGTCACAACCAGTGGTCTATCTCAGCGATGAATGCCATTTCA TGCATTCTCCGGACAAAGGAGCAGTTTCCAAAAGCAATTGAGTACTTGCAAAATATTTTGAAGTTGGATCCGAGC AATGGCGAGACTTGGGGCAGCCTGGGCCACTGCCATCTTATGATGGATAATTTACAAGAGGCATACACCTCTTAC CAGCAAGCCCTTTACCACTTGCGTGACCCCAAAGAACCCAAGCTGTGGTATGGAATCGGTATATTGTATGATCGC TATGGCTCTCTGGATCACGCGGAAGAGGCTTTCTCGCAAGTGATGCGCATGGCACCTGATTTCGAAAAGGCTAAT GAGATCTACTTCCGCCTGGGAATCATATACAAGCAGCAGCAGAAGTTTAATCAGAGTTTGGAGTGCTTCAAATAC ATTGTTAGCGATCCTCCACGCCCTCTGACCGAAGAAGACATCTGGTTCCAGATTGGCCATGTCCACGAGCAACAG AAAGACTTTGAATCTGCCCAATCCGCGTACCAGCGCGTCCTGGAGCGAGATCCAAACCACGCCAAGGTTCTCCAG CAACTTGGTTGGCTCTATCACCAGCAGAGTAATGCTTTCCAAAGCCAGGAGAAGGCCATTCAGTTCCTGGAAAAG TCGGTCAATGCTGATAACAATGACGCTCAAAGCTGGTATCTCCTTGGTCGTTGCTACATGTCCATGGCGAAATAC CCCAAGGCGTATGAAGCCTATCAGCAAGCGGTCTATCGCGACGGCCGCAACCCTACCTTCTGGTGCTCGATTGGT GTTCTTTACTACCAGATCAACCAATATCGCGATGCCCTCGATGCTTACTCTCGTGCGATCCGCCTGAACCCTTAC ATTTCAGAGGTCTGGTATGACCTGGGCACTTTGTACGAATCATGCAACAACCAGATTGCCGATGCTCTGGATGCC TACGGACGCGCCGCAGATCTTGACCCGAGCAACGTTCACATCAAGGCTCGTCTGCAGCTTCTTCAAAGCCAGTTG TCTGCTGGCACGGCTGGACAACAGCCACCTTCTGCCCCCGCGCCTCAGCCGCAGGATGTTCATCCTCAGGCTTAT CAGGCACCTGGCGTTGGTGCACCTCCAGCTCCTCAGTGGGGTGCACCAGCCCCCATCGGTCCCCCTCCACAAGCT CCTGCACCCCCGAGACAGATTCCTGACTGGAACCGTGGGATCAACGAGCTTCAGTCTCAAAATCAAGCTCCCCCA TCTAACGGCCTTGACCAGCGCGACGCTCGGATCCCCGGTGCTCCCGCTCAAAGCCCTCGACAGGAGCCTGGTCGG TCGTTCCCGGATCCCCGTGGCGCGCCTCGCTCGCCAAAGATGGGTGATCCCAACTCCTACCCGCCGCCTCACACT CTACCCCAGCTTGGAAATGCGCCTGGTCCAAGCCACGAACGCGCTCCTAGTGGCAGCAATGCCTTTGGTGCTCCG CGTGGTGCTCTGCCGAGTGGCCTGCCCGTCGCTCCTCCTGGTCCCCCTGGACCTCCTGGACCCAATGGCGGTGCT CCTCCCCCTCCTTACCAGAACCGCCCTTTCAGTCCTGCTCCTGAGATTCGCCCTATTCGCGAGGAGCGTCCCTCT TCGCCAGGTTCAGGATACCCCCTCCAACAGTTCCACCCCGGTCCTACCCTCCCCCCACAAGTTCCAGGTGGTAAC TCCATCGCCTCTGGTGCCCCGGCCCCTGCTTCGGCTGCCACTGCTGCTGAGGCTGCCGCCCGTGATCGCGAAGAT CGCCCCGCATCTGCAATGAAGCGCGGCCGCGAATGGGAAGCTGATGCTGGCCCAGTCAAGAAGCATGCAAATGAA GAGAGCCGGGCTCGTCTGGATGACCAGAATAACCGCCGCCCGAGCCCACCCGCTCGTTTGCCTTCTCCTGGTGAG ATGCAACGACGAAGCTCCTCAGAGGCCCGCCGCGAGGACGCCCGTCGTGCCAATGAGAACTATCACCCCTCAGAA GCTGCTCACCACCCTCCTACTCTGCCTTCGATCCAAGACATGCCTCCCCGTCCTTCTGCTGGCCCCAGTCTTCCC CCGATGGCCGAGAGCTCTGCACCTGCACCTAACGCTCCCCCCACTGGACCTCCTTCCGCCAACACCCCGGTCAAG GAAGAAGCTCCTCGTCCTGAGGCTCCCCCTGCACACGAGCCCCCCGCGCGTAAGATGGATGTCGATGAAGACTAC GATGATGAAGTTGAGGAAGAGAAGAAGGCTGCTGCTTCTAAGGGCAGCCCCAACGGCAGCACTGCTGGCAACCCC GCCAATGGTGCTGGAAATGCCCGTGCCAGTACTCCATCCAAGATCGAGCCTACGGCATAA |
Gene | >Pro_DTO377G3_2|g9103.t1 ATGTCTCATACTCAACCATCGCCCACCACGGGCGTGGCTCCTCACCATGCCGCAGCGCATCTCGCTCATGCGCAA GCGCAGGCGCAGGCCAATGGTCATATGTCCGCAATTCCCGTGCAAGGTCAAAAGGGAGTCCCTACTCTCACCACC GCGCAAAAGATCGCCACACTCAATGAACAAGTCTGGCTTCAAATAGGTAAATATTCCCGATCATTATAATTTGGC GAATCCTGACAGCCTCGTTTGTAGGAAGCTTGACCGAATTGATGGGCGATCTGGAGGGTGCGATGAATGCCTACG AGCAGGCTCTGCGTCACAACCAGTGGTCTATCTCAGCGATGAATGCCATTTCATGCATTCTCCGGACAAAGGAGC AGTTTCCAAAAGCAATTGAGTACTTGCAAAATATTTTGAAGTTGGATCCGAGCAATGGCGAGACTTGGGGCAGCC TGGGCCACTGCCATCTTATGATGGATAATTTACAAGAGGCATACACCTCTTACCAGCAAGCCCTTTACCACTTGC GTGACCCCAAAGTAAGCCGTTTTCCCTTAACATTTTCCCTCGAATATTTCTCTGATTCAATTCTCTCATTAGGAA CCCAAGCTGTGGTATGGAATCGGTATATTGTATGATCGCTATGGCTCTCTGGATCACGCGGAAGAGGCTTTCTCG CAAGTGATGCGCATGGCACCTGATTTCGAAAAGGCTAATGAGATCTACTTCCGCCTGGGAATCATATACAAGCAG CAGCAGAAGTTTAATCAGAGTTTGGAGGTATGTGAAATCTCTTCATATGAGCGAGAGCTGTCACTAACTCATCCT AGTGCTTCAAATACATTGTTAGCGATCCTCCACGCCCTCTGACCGAAGAAGACATCTGGTTCCAGATTGGCCATG TCCACGAGCAACAGAAAGACGTAAGTCATGCTTCCCTACACTCTTGATTACCTTGTACTCATTCAATCCTCAGTT TGAATCTGCCCAATCCGCGTACCAGCGCGTCCTGGAGCGAGATCCAAACCACGCCAAGGTTCTCCAGCAACTTGG TTGGCTCTATCACCAGCAGAGTAATGCTTTCCAAAGCCAGGAGAAGGCCATTCAGTTCCTGGAAAAGTCGGTCAA TGCTGGTAAGTCACAATCCCCAGGACTATATACATTTGAAACTAATTCATCCTTTCCCTAGATAACAATGACGCT CAAAGCTGGTATCTCCTTGGTCGTTGCTACATGTCCATGGCGAAATACCCCAAGGCGTATGAAGCCTATCAGCAA GCGGTCTATCGCGACGGCCGCAACCCTACCTTCTGGTGCTCGATTGGTGTTCTTTACTACCAGATCAACCAATAT CGCGATGCCCTCGATGCTTACTCTCGTGCGATCCGCCTGAACCCTTACATTTCAGAGGTCTGGTATGACCTGGGC ACTTTGTACGAATCATGCAACAACCAGATTGCCGATGCTCTGGATGCCTACGGACGCGCCGCAGATCTTGACCCG AGCAACGTTCACATCAAGGCTCGTCTGCAGCTTCTTCAAAGCCAGTTGTCTGCTGGCACGGCTGGACAACAGCCA CCTTCTGCCCCCGCGCCTCAGCCGCAGGATGTTCATCCTCAGGCTTATCAGGCACCTGGCGTTGGTGCACCTCCA GCTCCTCAGTGGGGTGCACCAGCCCCCATCGGTCCCCCTCCACAAGCTCCTGCACCCCCGAGACAGATTCCTGAC TGGAACCGTGGGATCAACGAGCTTCAGTCTCAAAATCAAGCTCCCCCATCTAACGGCCTTGACCAGCGCGACGCT CGGATCCCCGGTGCTCCCGCTCAAAGCCCTCGACAGGAGCCTGGTCGGTCGTTCCCGGATCCCCGTGGCGCGCCT CGCTCGCCAAAGATGGGTGATCCCAACTCCTACCCGCCGCCTCACACTCTACCCCAGCTTGGAAATGCGCCTGGT CCAAGCCACGAACGCGCTCCTAGTGGCAGCAATGCCTTTGGTGCTCCGCGTGGTGCTCTGCCGAGTGGCCTGCCC GTCGCTCCTCCTGGTCCCCCTGGACCTCCTGGACCCAATGGCGGTGCTCCTCCCCCTCCTTACCAGAACCGCCCT TTCAGTCCTGCTCCTGAGATTCGCCCTATTCGCGAGGAGCGTCCCTCTTCGCCAGGTTCAGGATACCCCCTCCAA CAGTTCCACCCCGGTCCTACCCTCCCCCCACAAGTTCCAGGTGGTAACTCCATCGCCTCTGGTGCCCCGGCCCCT GCTTCGGCTGCCACTGCTGCTGAGGCTGCCGCCCGTGATCGCGAAGATCGCCCCGCATCTGCAATGAAGCGCGGC CGCGAATGGGAAGCTGATGCTGGCCCAGTCAAGAAGCATGCAAATGAAGAGAGCCGGGCTCGTCTGGATGACCAG AATAACCGCCGCCCGAGCCCACCCGCTCGTTTGCCTTCTCCTGGTGAGATGCAACGACGAAGCTCCTCAGAGGCC CGCCGCGAGGACGCCCGTCGTGCCAATGAGAACTATCACCCCTCAGAAGCTGCTCACCACCCTCCTACTCTGCCT TCGATCCAAGACATGCCTCCCCGTCCTTCTGCTGGCCCCAGTCTTCCCCCGATGGCCGAGAGCTCTGCACCTGCA CCTAACGCTCCCCCCACTGGACCTCCTTCCGCCAACACCCCGGTCAAGGAAGAAGCTCCTCGTCCTGAGGCTCCC CCTGCACACGAGCCCCCCGCGCGTAAGATGGATGTCGATGAAGACTACGATGATGAAGTTGAGGAAGAGAAGAAG GCTGCTGCTTCTAAGGGCAGCCCCAACGGCAGCACTGCTGGCAACCCCGCCAATGGTGCTGGAAATGCCCGTGCC AGTACTCCATCCAAGATCGAGCCTACGGCATAA |