Protein ID | Pro_DTO377G3_2|g9099.t1 |
Gene name | |
Location | scaffold_41:119686..120199 |
Strand | - |
Gene length (bp) | 513 |
Transcript length (bp) | 513 |
Coding sequence length (bp) | 513 |
Protein length (aa) | 171 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00011 | HSP20 | Hsp20/alpha crystallin family | 4.5E-14 | 94 | 169 |
PF17886 | ArsA_HSP20 | HSP20-like domain found in ArsA | 6.6E-06 | 49 | 154 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g9099.t1 MSLLRASLPGSSDFAPLFRLLDDYDVHRSGRSQPAARSFSPRFDVRESDDSYHLDGELPGLSQKDIDIEFSDPQT LNVKGRAEREYHTSVPETEAQGDEVEQKSEQKSEQKSEPTYRYWASERSVGEFQRTFSFPVSVDQDKVKASLTNG ILSIIVPKATTSTTKKITIE* |
Coding | >Pro_DTO377G3_2|g9099.t1 ATGTCTCTCTTGCGTGCCAGCCTTCCTGGTTCCAGTGACTTCGCTCCCCTCTTTCGTCTCCTTGACGACTATGAT GTCCACCGCTCCGGTCGTAGCCAGCCTGCAGCTCGCTCGTTCTCCCCTCGCTTTGACGTCCGCGAAAGCGATGAC TCTTACCACCTCGACGGCGAACTACCTGGTCTCTCTCAAAAGGATATCGACATCGAGTTCTCCGACCCCCAGACC CTGAATGTGAAGGGTCGCGCGGAACGCGAGTACCACACCTCTGTGCCCGAGACTGAAGCGCAGGGCGATGAGGTT GAGCAGAAGTCTGAACAAAAGTCTGAGCAAAAGTCTGAGCCCACTTACCGCTACTGGGCCAGCGAGCGATCGGTT GGAGAATTCCAACGTACCTTCTCCTTCCCCGTTAGTGTCGATCAGGACAAGGTCAAGGCCAGCCTCACCAATGGC ATTCTGTCTATTATTGTGCCCAAGGCCACTACCTCGACCACCAAGAAGATTACCATTGAGTGA |
Transcript | >Pro_DTO377G3_2|g9099.t1 ATGTCTCTCTTGCGTGCCAGCCTTCCTGGTTCCAGTGACTTCGCTCCCCTCTTTCGTCTCCTTGACGACTATGAT GTCCACCGCTCCGGTCGTAGCCAGCCTGCAGCTCGCTCGTTCTCCCCTCGCTTTGACGTCCGCGAAAGCGATGAC TCTTACCACCTCGACGGCGAACTACCTGGTCTCTCTCAAAAGGATATCGACATCGAGTTCTCCGACCCCCAGACC CTGAATGTGAAGGGTCGCGCGGAACGCGAGTACCACACCTCTGTGCCCGAGACTGAAGCGCAGGGCGATGAGGTT GAGCAGAAGTCTGAACAAAAGTCTGAGCAAAAGTCTGAGCCCACTTACCGCTACTGGGCCAGCGAGCGATCGGTT GGAGAATTCCAACGTACCTTCTCCTTCCCCGTTAGTGTCGATCAGGACAAGGTCAAGGCCAGCCTCACCAATGGC ATTCTGTCTATTATTGTGCCCAAGGCCACTACCTCGACCACCAAGAAGATTACCATTGAGTGA |
Gene | >Pro_DTO377G3_2|g9099.t1 ATGTCTCTCTTGCGTGCCAGCCTTCCTGGTTCCAGTGACTTCGCTCCCCTCTTTCGTCTCCTTGACGACTATGAT GTCCACCGCTCCGGTCGTAGCCAGCCTGCAGCTCGCTCGTTCTCCCCTCGCTTTGACGTCCGCGAAAGCGATGAC TCTTACCACCTCGACGGCGAACTACCTGGTCTCTCTCAAAAGGATATCGACATCGAGTTCTCCGACCCCCAGACC CTGAATGTGAAGGGTCGCGCGGAACGCGAGTACCACACCTCTGTGCCCGAGACTGAAGCGCAGGGCGATGAGGTT GAGCAGAAGTCTGAACAAAAGTCTGAGCAAAAGTCTGAGCCCACTTACCGCTACTGGGCCAGCGAGCGATCGGTT GGAGAATTCCAACGTACCTTCTCCTTCCCCGTTAGTGTCGATCAGGACAAGGTCAAGGCCAGCCTCACCAATGGC ATTCTGTCTATTATTGTGCCCAAGGCCACTACCTCGACCACCAAGAAGATTACCATTGAGTGA |