Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9071.t1
Gene name
Locationscaffold_41:60502..61534
Strand+
Gene length (bp)1032
Transcript length (bp)1032
Coding sequence length (bp)1032
Protein length (aa) 344

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02826 2-Hacid_dh_C D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 4.6E-47 121 311
PF00389 2-Hacid_dh D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 2.6E-06 35 342

GO

GO Term Description Terminal node
GO:0051287 NAD binding Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0055114 oxidation-reduction process Yes
GO:0000166 nucleotide binding No
GO:0008150 biological_process No
GO:1901265 nucleoside phosphate binding No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0003824 catalytic activity No
GO:0016491 oxidoreductase activity No
GO:0048037 cofactor binding No
GO:0050662 coenzyme binding No
GO:0008152 metabolic process No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0003674 molecular_function No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9071.t1
MAHFKFAILDDYQGIAPAYFTHLESRVDISSFPETLDPRDPAQHDALVQRLLPFDIILAMRERTPFAANTIAALP
NLKLLLTTGTRNLALDLGAFTRSNVAVAGTEGRPPGVNSTVQHTWALILGLARNIARDDAAVKRGAWQGSLGINL
SGKTLGLLGLGKLGSQVGKIGALAFGMKVLAWSTNLTQEKADEQAHAQGLPVGTFAVAASKEEFFAQADIVSVHS
VLSDRSRGIVGATEIANMQPSAFIINTSRGPLIEEQALLEALNAGRIRGAALDVFDPEPLPLDSPWRNTPWGQDG
RSEVLLSPHMGYGEEELLRGWYRETAENLERWLNGQELLRKMN*
Coding >Pro_DTO377G3_2|g9071.t1
ATGGCTCATTTCAAGTTTGCAATCCTTGACGATTACCAGGGCATTGCGCCTGCCTATTTCACTCACCTCGAGTCG
CGAGTTGACATTTCCAGTTTTCCCGAAACCCTCGATCCCCGCGATCCTGCACAACACGATGCCCTTGTCCAACGA
CTCCTTCCCTTCGATATCATCTTGGCGATGCGCGAGCGAACACCTTTTGCAGCCAATACTATTGCAGCGCTCCCA
AATTTGAAACTTCTTTTGACCACGGGTACTCGCAATCTGGCGCTAGATCTCGGGGCATTTACACGTTCCAATGTG
GCTGTCGCAGGCACCGAGGGTCGCCCACCCGGTGTGAATTCGACGGTTCAGCATACATGGGCTTTGATCTTGGGA
CTAGCCCGAAATATAGCACGCGACGATGCAGCCGTCAAACGCGGTGCATGGCAAGGTTCCCTTGGGATCAACTTG
TCCGGGAAGACATTAGGGCTGCTTGGGCTGGGAAAACTTGGGTCGCAAGTAGGAAAGATTGGCGCTCTGGCTTTC
GGCATGAAGGTTCTCGCATGGTCAACAAACCTGACACAGGAAAAGGCCGACGAGCAAGCGCACGCTCAGGGTCTG
CCAGTGGGGACATTTGCCGTCGCCGCGTCCAAAGAGGAATTCTTCGCCCAGGCTGACATCGTCAGTGTACACAGC
GTACTATCGGATCGAAGTCGTGGAATTGTTGGCGCAACTGAAATAGCAAATATGCAACCATCTGCATTTATCATC
AATACTTCACGTGGGCCCTTGATTGAGGAGCAGGCCCTCCTCGAGGCTCTGAATGCGGGCCGCATTCGTGGCGCC
GCGTTAGATGTCTTTGACCCGGAGCCATTGCCTCTGGATAGTCCATGGCGTAATACTCCCTGGGGCCAGGATGGA
CGCAGTGAAGTTCTGCTTTCCCCCCACATGGGATACGGAGAGGAGGAGCTATTGCGGGGGTGGTATCGCGAAACA
GCGGAGAATTTAGAGCGGTGGTTGAATGGACAGGAGCTACTGCGCAAGATGAATTGA
Transcript >Pro_DTO377G3_2|g9071.t1
ATGGCTCATTTCAAGTTTGCAATCCTTGACGATTACCAGGGCATTGCGCCTGCCTATTTCACTCACCTCGAGTCG
CGAGTTGACATTTCCAGTTTTCCCGAAACCCTCGATCCCCGCGATCCTGCACAACACGATGCCCTTGTCCAACGA
CTCCTTCCCTTCGATATCATCTTGGCGATGCGCGAGCGAACACCTTTTGCAGCCAATACTATTGCAGCGCTCCCA
AATTTGAAACTTCTTTTGACCACGGGTACTCGCAATCTGGCGCTAGATCTCGGGGCATTTACACGTTCCAATGTG
GCTGTCGCAGGCACCGAGGGTCGCCCACCCGGTGTGAATTCGACGGTTCAGCATACATGGGCTTTGATCTTGGGA
CTAGCCCGAAATATAGCACGCGACGATGCAGCCGTCAAACGCGGTGCATGGCAAGGTTCCCTTGGGATCAACTTG
TCCGGGAAGACATTAGGGCTGCTTGGGCTGGGAAAACTTGGGTCGCAAGTAGGAAAGATTGGCGCTCTGGCTTTC
GGCATGAAGGTTCTCGCATGGTCAACAAACCTGACACAGGAAAAGGCCGACGAGCAAGCGCACGCTCAGGGTCTG
CCAGTGGGGACATTTGCCGTCGCCGCGTCCAAAGAGGAATTCTTCGCCCAGGCTGACATCGTCAGTGTACACAGC
GTACTATCGGATCGAAGTCGTGGAATTGTTGGCGCAACTGAAATAGCAAATATGCAACCATCTGCATTTATCATC
AATACTTCACGTGGGCCCTTGATTGAGGAGCAGGCCCTCCTCGAGGCTCTGAATGCGGGCCGCATTCGTGGCGCC
GCGTTAGATGTCTTTGACCCGGAGCCATTGCCTCTGGATAGTCCATGGCGTAATACTCCCTGGGGCCAGGATGGA
CGCAGTGAAGTTCTGCTTTCCCCCCACATGGGATACGGAGAGGAGGAGCTATTGCGGGGGTGGTATCGCGAAACA
GCGGAGAATTTAGAGCGGTGGTTGAATGGACAGGAGCTACTGCGCAAGATGAATTGA
Gene >Pro_DTO377G3_2|g9071.t1
ATGGCTCATTTCAAGTTTGCAATCCTTGACGATTACCAGGGCATTGCGCCTGCCTATTTCACTCACCTCGAGTCG
CGAGTTGACATTTCCAGTTTTCCCGAAACCCTCGATCCCCGCGATCCTGCACAACACGATGCCCTTGTCCAACGA
CTCCTTCCCTTCGATATCATCTTGGCGATGCGCGAGCGAACACCTTTTGCAGCCAATACTATTGCAGCGCTCCCA
AATTTGAAACTTCTTTTGACCACGGGTACTCGCAATCTGGCGCTAGATCTCGGGGCATTTACACGTTCCAATGTG
GCTGTCGCAGGCACCGAGGGTCGCCCACCCGGTGTGAATTCGACGGTTCAGCATACATGGGCTTTGATCTTGGGA
CTAGCCCGAAATATAGCACGCGACGATGCAGCCGTCAAACGCGGTGCATGGCAAGGTTCCCTTGGGATCAACTTG
TCCGGGAAGACATTAGGGCTGCTTGGGCTGGGAAAACTTGGGTCGCAAGTAGGAAAGATTGGCGCTCTGGCTTTC
GGCATGAAGGTTCTCGCATGGTCAACAAACCTGACACAGGAAAAGGCCGACGAGCAAGCGCACGCTCAGGGTCTG
CCAGTGGGGACATTTGCCGTCGCCGCGTCCAAAGAGGAATTCTTCGCCCAGGCTGACATCGTCAGTGTACACAGC
GTACTATCGGATCGAAGTCGTGGAATTGTTGGCGCAACTGAAATAGCAAATATGCAACCATCTGCATTTATCATC
AATACTTCACGTGGGCCCTTGATTGAGGAGCAGGCCCTCCTCGAGGCTCTGAATGCGGGCCGCATTCGTGGCGCC
GCGTTAGATGTCTTTGACCCGGAGCCATTGCCTCTGGATAGTCCATGGCGTAATACTCCCTGGGGCCAGGATGGA
CGCAGTGAAGTTCTGCTTTCCCCCCACATGGGATACGGAGAGGAGGAGCTATTGCGGGGGTGGTATCGCGAAACA
GCGGAGAATTTAGAGCGGTGGTTGAATGGACAGGAGCTACTGCGCAAGATGAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail