Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g9067.t1
Gene name
Location	scaffold_41:56207..56943
Strand	+
Gene length (bp)	736
Transcript length (bp)	678
Coding sequence length (bp)	678
Protein length (aa)	226

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01183	Glyco_hydro_25	Glycosyl hydrolases family 25	2.8E-45	22	205

GO

GO Term	Description	Terminal node
GO:0016998	cell wall macromolecule catabolic process	Yes
GO:0009253	peptidoglycan catabolic process	Yes
GO:0003796	lysozyme activity	Yes
GO:0044036	cell wall macromolecule metabolic process	No
GO:1901136	carbohydrate derivative catabolic process	No
GO:0016798	hydrolase activity, acting on glycosyl bonds	No
GO:0009056	catabolic process	No
GO:0009057	macromolecule catabolic process	No
GO:0008152	metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0044248	cellular catabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0000270	peptidoglycan metabolic process	No
GO:0008150	biological_process	No
GO:1901565	organonitrogen compound catabolic process	No
GO:0003824	catalytic activity	No
GO:0044265	cellular macromolecule catabolic process	No
GO:0003674	molecular_function	No
GO:0006807	nitrogen compound metabolic process	No
GO:1901575	organic substance catabolic process	No
GO:0016787	hydrolase activity	No
GO:0006022	aminoglycan metabolic process	No
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	No
GO:1901135	carbohydrate derivative metabolic process	No
GO:0006027	glycosaminoglycan catabolic process	No
GO:0044237	cellular metabolic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0009987	cellular process	No
GO:0006026	aminoglycan catabolic process	No
GO:0061783	peptidoglycan muralytic activity	No
GO:0030203	glycosaminoglycan metabolic process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 21	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g9067.t1 MKFTAIPLLFATAASATVQGFDISSYQPSVDFAGAYKSGARFVMIKATEGTSYTSSTFSSQYTGATNAGLIRGGY HFAQPASSTGATQAKYFIAHGGGWSNDGLTLPGMLDIEYNPSGATCYGLSQSAMVAWVKDFGETYKAAEGRYPMI YSTADWWNTCTGGSTAFSADYPLVLASYSTSVGTIPGGWPYQSFWQNTDSYSYGGDSEVWNGSEAALQTFAKNAS *
Coding	>Pro_DTO377G3_2\|g9067.t1 ATGAAGTTTACCGCCATCCCTCTCCTGTTCGCAACCGCTGCCAGCGCCACCGTCCAGGGCTTCGACATCTCCAGC TACCAACCCAGCGTGGACTTCGCTGGTGCTTACAAGTCTGGCGCTCGCTTTGTCATGATCAAGGCAACTGAGGGT ACCAGCTATACCTCCAGCACTTTCTCCAGCCAATATACTGGTGCCACTAACGCCGGTCTGATCCGTGGTGGTTAT CACTTTGCCCAGCCCGCCAGTAGCACCGGTGCCACTCAAGCCAAGTACTTCATCGCCCACGGTGGAGGTTGGTCC AATGACGGCCTGACCCTGCCCGGTATGCTAGACATTGAATACAACCCATCCGGCGCAACCTGCTATGGGCTCAGC CAATCTGCCATGGTTGCTTGGGTCAAGGACTTTGGCGAGACCTACAAGGCTGCCGAGGGCCGGTACCCTATGATC TACTCCACCGCCGACTGGTGGAACACTTGCACTGGTGGCAGCACGGCATTCAGCGCGGACTACCCGTTGGTTCTG GCTTCATACAGCACCTCGGTCGGCACTATCCCCGGTGGCTGGCCTTACCAGAGCTTCTGGCAGAACACCGATTCG TATAGCTATGGAGGTGATTCCGAGGTTTGGAATGGCAGCGAAGCCGCTCTGCAGACCTTTGCCAAGAACGCTTCT TAA
Transcript	>Pro_DTO377G3_2\|g9067.t1 ATGAAGTTTACCGCCATCCCTCTCCTGTTCGCAACCGCTGCCAGCGCCACCGTCCAGGGCTTCGACATCTCCAGC TACCAACCCAGCGTGGACTTCGCTGGTGCTTACAAGTCTGGCGCTCGCTTTGTCATGATCAAGGCAACTGAGGGT ACCAGCTATACCTCCAGCACTTTCTCCAGCCAATATACTGGTGCCACTAACGCCGGTCTGATCCGTGGTGGTTAT CACTTTGCCCAGCCCGCCAGTAGCACCGGTGCCACTCAAGCCAAGTACTTCATCGCCCACGGTGGAGGTTGGTCC AATGACGGCCTGACCCTGCCCGGTATGCTAGACATTGAATACAACCCATCCGGCGCAACCTGCTATGGGCTCAGC CAATCTGCCATGGTTGCTTGGGTCAAGGACTTTGGCGAGACCTACAAGGCTGCCGAGGGCCGGTACCCTATGATC TACTCCACCGCCGACTGGTGGAACACTTGCACTGGTGGCAGCACGGCATTCAGCGCGGACTACCCGTTGGTTCTG GCTTCATACAGCACCTCGGTCGGCACTATCCCCGGTGGCTGGCCTTACCAGAGCTTCTGGCAGAACACCGATTCG TATAGCTATGGAGGTGATTCCGAGGTTTGGAATGGCAGCGAAGCCGCTCTGCAGACCTTTGCCAAGAACGCTTCT TAA
Gene	>Pro_DTO377G3_2\|g9067.t1 ATGAAGTTTACCGCCATCCCTCTCCTGTTCGCAACCGCTGCCAGCGCCACCGTCCAGGGCTTCGACATCTCCAGC TACCAACCCAGCGTGGACTTCGCTGGTGCTTACAAGTCTGGCGCTCGCTTTGTCATGATCAAGGTAGGCTTTCCC GAATTCACAACCGTTCCCTTCTCAGTCCCAATACTAACTATATCAGGCAACTGAGGGTACCAGCTATACCTCCAG CACTTTCTCCAGCCAATATACTGGTGCCACTAACGCCGGTCTGATCCGTGGTGGTTATCACTTTGCCCAGCCCGC CAGTAGCACCGGTGCCACTCAAGCCAAGTACTTCATCGCCCACGGTGGAGGTTGGTCCAATGACGGCCTGACCCT GCCCGGTATGCTAGACATTGAATACAACCCATCCGGCGCAACCTGCTATGGGCTCAGCCAATCTGCCATGGTTGC TTGGGTCAAGGACTTTGGCGAGACCTACAAGGCTGCCGAGGGCCGGTACCCTATGATCTACTCCACCGCCGACTG GTGGAACACTTGCACTGGTGGCAGCACGGCATTCAGCGCGGACTACCCGTTGGTTCTGGCTTCATACAGCACCTC GGTCGGCACTATCCCCGGTGGCTGGCCTTACCAGAGCTTCTGGCAGAACACCGATTCGTATAGCTATGGAGGTGA TTCCGAGGTTTGGAATGGCAGCGAAGCCGCTCTGCAGACCTTTGCCAAGAACGCTTCTTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences