Protein ID | Pro_DTO377G3_2|g9061.t1 |
Gene name | |
Location | scaffold_41:41187..44653 |
Strand | - |
Gene length (bp) | 3466 |
Transcript length (bp) | 2232 |
Coding sequence length (bp) | 2232 |
Protein length (aa) | 744 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02518 | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 1.3E-25 | 416 | 533 |
PF00072 | Response_reg | Response regulator receiver domain | 7.6E-18 | 570 | 659 |
PF00512 | HisKA | His Kinase A (phospho-acceptor) domain | 1.6E-16 | 306 | 370 |
PF08448 | PAS_4 | PAS fold | 2.7E-05 | 53 | 143 |
PF00989 | PAS | PAS fold | 4.9E-08 | 186 | 284 |
PF13426 | PAS_9 | PAS domain | 1.6E-09 | 185 | 287 |
GO Term | Description | Terminal node |
---|---|---|
GO:0000155 | phosphorelay sensor kinase activity | Yes |
GO:0000160 | phosphorelay signal transduction system | Yes |
GO:0006355 | regulation of transcription, DNA-templated | Yes |
GO:0007165 | signal transduction | Yes |
GO:0008150 | biological_process | No |
GO:2001141 | regulation of RNA biosynthetic process | No |
GO:0050789 | regulation of biological process | No |
GO:0004673 | protein histidine kinase activity | No |
GO:0010468 | regulation of gene expression | No |
GO:0010556 | regulation of macromolecule biosynthetic process | No |
GO:0016740 | transferase activity | No |
GO:0060255 | regulation of macromolecule metabolic process | No |
GO:0016301 | kinase activity | No |
GO:0051252 | regulation of RNA metabolic process | No |
GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
GO:0004672 | protein kinase activity | No |
GO:0031323 | regulation of cellular metabolic process | No |
GO:0140096 | catalytic activity, acting on a protein | No |
GO:0003824 | catalytic activity | No |
GO:1903506 | regulation of nucleic acid-templated transcription | No |
GO:0065007 | biological regulation | No |
GO:0003674 | molecular_function | No |
GO:0035556 | intracellular signal transduction | No |
GO:0051171 | regulation of nitrogen compound metabolic process | No |
GO:0019222 | regulation of metabolic process | No |
GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
GO:0031326 | regulation of cellular biosynthetic process | No |
GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | No |
GO:0080090 | regulation of primary metabolic process | No |
GO:0009889 | regulation of biosynthetic process | No |
GO:0050794 | regulation of cellular process | No |
GO:0009987 | cellular process | No |
GO:0016773 | phosphotransferase activity, alcohol group as acceptor | No |
GO:0140299 | small molecule sensor activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 29 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g9061.t1 MPVDQMLHLRIDCPMNNVAMVITPPAESDLNLENKSLEQPVVGSLSRIYRFTPKPTLVLDGALRIVEVSNSHVEV FKHSRDQLLAANVYDLPPSILPAPDIASLIGALGTAISTREVQVIQRVHVAKVDAFFSLSVTPIFEDDSLIYMLL EAQRIKHHRHRSNSISDDAYPNEIYKILVDTVRDYAIFMLDTRGHIATWNSGAAILKGYTSSEIIGQHFSIFYGR DDREIKKPVRELEVCLQEGKLEDEGWRYHKDGNRFWANVMITAIYQNGSHVGFVKVTRDMTERRATEARLIDAFE ESAKLKSDFLANMSHELRTPMNGMLLALTMLMRTELTDDQREFGSILEDSTSILLQVINDVLDYSKLSSGTFPLN TDVVHIPDVISAVVRNCQSALKPGVKIMGDVSAGFPPNLKGDPLRFRQVLQNMVTNAVKFTESGHVRVHATYTID EKDPDMYVISTQVVDTGIGVPEDASNTLFTPFTRFADTATKRYQGTGLGLSICKSLAELMGGAVGFHANPDGRGS VFWMTAKMARLTSPVSTVKQRLQPAIPEALDNSASLEKIAPHKHILLVEDNKVNQLIMLKLLSSLGFKRVDAAWD GAEAVRMVKQKPLAYNVILMDISMPVMDGLTATEHIRRMKLDMPILALTGNALKGDAETLVRLIMYWLRVNLSGV VFFPRIMFGELAEERNPSYGPRVTRLNFPRGVDLVWSRYEWISSILALFGCRGLSIVGQLAVLPLGWV* |
Coding | >Pro_DTO377G3_2|g9061.t1 ATGCCTGTGGATCAGATGCTCCACCTGAGAATCGACTGTCCTATGAACAATGTCGCGATGGTGATCACGCCTCCG GCCGAGAGTGACTTGAATCTGGAGAACAAATCCCTTGAACAGCCCGTTGTCGGATCGTTGAGTCGCATCTATCGA TTTACACCGAAACCGACTCTCGTTTTAGACGGCGCTCTGCGAATCGTCGAAGTGTCCAACAGTCATGTGGAAGTC TTCAAGCACTCACGAGACCAACTGTTGGCAGCGAATGTCTACGATCTTCCCCCCTCCATCCTCCCAGCCCCCGAT ATCGCCTCCCTGATCGGGGCTCTTGGCACTGCCATATCAACTCGCGAAGTGCAGGTCATCCAGCGTGTTCACGTG GCAAAAGTCGACGCTTTCTTCTCACTTAGCGTGACACCCATCTTTGAAGATGACTCGCTGATCTACATGCTACTG GAAGCCCAGCGGATCAAACATCACCGGCATCGGTCGAATTCCATCAGCGACGATGCCTATCCCAACGAAATTTAC AAAATCTTGGTCGACACCGTGAGGGATTATGCCATTTTCATGCTCGATACGCGCGGCCATATTGCGACATGGAAT TCGGGCGCCGCTATTCTGAAGGGATACACATCCTCCGAGATCATCGGCCAGCATTTCTCCATCTTTTACGGTCGC GATGACCGCGAAATAAAAAAACCCGTCCGCGAGCTGGAGGTCTGTTTACAAGAAGGAAAACTGGAGGATGAGGGC TGGCGTTATCACAAGGATGGCAACCGGTTTTGGGCCAATGTCATGATCACTGCCATCTATCAGAACGGCAGCCAT GTGGGATTCGTGAAAGTTACCCGCGACATGACTGAACGCCGGGCGACAGAGGCGCGTTTGATTGACGCCTTTGAA GAATCGGCCAAGCTCAAGTCCGATTTCTTGGCCAACATGTCCCACGAATTGCGCACCCCGATGAATGGCATGCTC TTGGCTTTGACAATGCTAATGAGGACCGAATTGACTGATGACCAGCGGGAATTCGGATCCATCCTGGAAGACTCA ACATCTATCTTGCTGCAGGTCATTAACGATGTCCTAGATTATTCCAAGCTATCGTCGGGAACCTTCCCCTTGAAC ACAGACGTTGTCCACATCCCCGACGTGATCTCGGCTGTCGTTCGGAATTGTCAGTCGGCGCTGAAGCCCGGTGTC AAAATCATGGGCGATGTAAGCGCGGGCTTTCCTCCAAACCTCAAAGGTGACCCGCTGCGATTCCGCCAAGTTCTG CAAAATATGGTCACCAACGCAGTGAAATTCACCGAGAGTGGTCATGTTCGAGTTCATGCCACCTATACCATCGAT GAAAAGGACCCCGATATGTATGTAATCTCCACGCAGGTAGTGGACACTGGTATCGGCGTACCCGAAGATGCCTCA AACACCCTCTTCACCCCCTTCACGCGATTCGCGGACACGGCCACAAAAAGGTACCAGGGTACGGGCCTTGGCCTG TCGATATGCAAGAGCCTGGCTGAATTGATGGGTGGAGCGGTTGGTTTCCATGCCAATCCCGACGGACGCGGTAGT GTGTTCTGGATGACAGCCAAAATGGCTCGCCTTACCTCGCCAGTGTCTACAGTGAAGCAGAGATTGCAACCGGCT ATACCTGAGGCATTGGATAATTCCGCCTCGCTCGAGAAGATCGCCCCACACAAACACATCCTCCTTGTCGAAGAC AACAAGGTCAATCAACTTATTATGTTAAAACTTCTCAGCAGCCTGGGTTTCAAGCGCGTCGATGCTGCCTGGGAT GGAGCGGAAGCAGTGCGTATGGTGAAGCAGAAGCCTTTGGCCTATAATGTCATCCTGATGGACATCAGCATGCCG GTCATGGATGGATTAACCGCCACAGAGCACATTCGACGGATGAAACTCGATATGCCCATCCTTGCGTTGACGGGC AATGCTCTCAAGGGAGACGCAGAGACCCTTGTGCGTTTGATCATGTACTGGTTGCGAGTCAATCTCTCAGGGGTA GTTTTTTTCCCGAGGATCATGTTCGGAGAACTTGCCGAAGAACGCAACCCTTCATATGGACCCCGTGTGACCCGC CTTAACTTTCCGAGGGGTGTTGATTTGGTATGGTCACGTTATGAATGGATAAGCTCTATCCTTGCCCTGTTTGGT TGCCGGGGTCTTAGCATCGTTGGTCAACTGGCTGTCCTTCCTCTTGGGTGGGTTTAG |
Transcript | >Pro_DTO377G3_2|g9061.t1 ATGCCTGTGGATCAGATGCTCCACCTGAGAATCGACTGTCCTATGAACAATGTCGCGATGGTGATCACGCCTCCG GCCGAGAGTGACTTGAATCTGGAGAACAAATCCCTTGAACAGCCCGTTGTCGGATCGTTGAGTCGCATCTATCGA TTTACACCGAAACCGACTCTCGTTTTAGACGGCGCTCTGCGAATCGTCGAAGTGTCCAACAGTCATGTGGAAGTC TTCAAGCACTCACGAGACCAACTGTTGGCAGCGAATGTCTACGATCTTCCCCCCTCCATCCTCCCAGCCCCCGAT ATCGCCTCCCTGATCGGGGCTCTTGGCACTGCCATATCAACTCGCGAAGTGCAGGTCATCCAGCGTGTTCACGTG GCAAAAGTCGACGCTTTCTTCTCACTTAGCGTGACACCCATCTTTGAAGATGACTCGCTGATCTACATGCTACTG GAAGCCCAGCGGATCAAACATCACCGGCATCGGTCGAATTCCATCAGCGACGATGCCTATCCCAACGAAATTTAC AAAATCTTGGTCGACACCGTGAGGGATTATGCCATTTTCATGCTCGATACGCGCGGCCATATTGCGACATGGAAT TCGGGCGCCGCTATTCTGAAGGGATACACATCCTCCGAGATCATCGGCCAGCATTTCTCCATCTTTTACGGTCGC GATGACCGCGAAATAAAAAAACCCGTCCGCGAGCTGGAGGTCTGTTTACAAGAAGGAAAACTGGAGGATGAGGGC TGGCGTTATCACAAGGATGGCAACCGGTTTTGGGCCAATGTCATGATCACTGCCATCTATCAGAACGGCAGCCAT GTGGGATTCGTGAAAGTTACCCGCGACATGACTGAACGCCGGGCGACAGAGGCGCGTTTGATTGACGCCTTTGAA GAATCGGCCAAGCTCAAGTCCGATTTCTTGGCCAACATGTCCCACGAATTGCGCACCCCGATGAATGGCATGCTC TTGGCTTTGACAATGCTAATGAGGACCGAATTGACTGATGACCAGCGGGAATTCGGATCCATCCTGGAAGACTCA ACATCTATCTTGCTGCAGGTCATTAACGATGTCCTAGATTATTCCAAGCTATCGTCGGGAACCTTCCCCTTGAAC ACAGACGTTGTCCACATCCCCGACGTGATCTCGGCTGTCGTTCGGAATTGTCAGTCGGCGCTGAAGCCCGGTGTC AAAATCATGGGCGATGTAAGCGCGGGCTTTCCTCCAAACCTCAAAGGTGACCCGCTGCGATTCCGCCAAGTTCTG CAAAATATGGTCACCAACGCAGTGAAATTCACCGAGAGTGGTCATGTTCGAGTTCATGCCACCTATACCATCGAT GAAAAGGACCCCGATATGTATGTAATCTCCACGCAGGTAGTGGACACTGGTATCGGCGTACCCGAAGATGCCTCA AACACCCTCTTCACCCCCTTCACGCGATTCGCGGACACGGCCACAAAAAGGTACCAGGGTACGGGCCTTGGCCTG TCGATATGCAAGAGCCTGGCTGAATTGATGGGTGGAGCGGTTGGTTTCCATGCCAATCCCGACGGACGCGGTAGT GTGTTCTGGATGACAGCCAAAATGGCTCGCCTTACCTCGCCAGTGTCTACAGTGAAGCAGAGATTGCAACCGGCT ATACCTGAGGCATTGGATAATTCCGCCTCGCTCGAGAAGATCGCCCCACACAAACACATCCTCCTTGTCGAAGAC AACAAGGTCAATCAACTTATTATGTTAAAACTTCTCAGCAGCCTGGGTTTCAAGCGCGTCGATGCTGCCTGGGAT GGAGCGGAAGCAGTGCGTATGGTGAAGCAGAAGCCTTTGGCCTATAATGTCATCCTGATGGACATCAGCATGCCG GTCATGGATGGATTAACCGCCACAGAGCACATTCGACGGATGAAACTCGATATGCCCATCCTTGCGTTGACGGGC AATGCTCTCAAGGGAGACGCAGAGACCCTTGTGCGTTTGATCATGTACTGGTTGCGAGTCAATCTCTCAGGGGTA GTTTTTTTCCCGAGGATCATGTTCGGAGAACTTGCCGAAGAACGCAACCCTTCATATGGACCCCGTGTGACCCGC CTTAACTTTCCGAGGGGTGTTGATTTGGTATGGTCACGTTATGAATGGATAAGCTCTATCCTTGCCCTGTTTGGT TGCCGGGGTCTTAGCATCGTTGGTCAACTGGCTGTCCTTCCTCTTGGGTGGGTTTAG |
Gene | >Pro_DTO377G3_2|g9061.t1 ATGCCTGTGGATCAGATGCTCCACCTGAGAATCGACTGTCCTATGAACAATGTCGCGATGGTGATCACGCCTCCG GCCGAGAGTGACTTGAATCTGGAGAACAAATCCCTTGAACAGCCCGTTGTCGGATCGTTGAGTCGCATCTATCGA TTTACACCGTGAGAACCCGAACCCCTTGGAGGGATAGCATGGATTATTCCCGTTAACCCCTGTAGGAAACCGACT CTCGTTTTAGACGGCGCTCTGCGAATCGTCGAAGTGTCCAACAGTCATGTGGAAGTCTTCAAGCACTCACGAGAC CAACTGTTGGCAGCGAATGTCTACGATCTTCCCCCCTCCATCCTCCCAGCCCCCGATATCGCCTCCCTGATCGGG GCTCTTGGCACTGCCATATCAACTCGCGAAGTGCAGGTCATCCAGCGTGTTCACGTGGCAAAAGTCGACGCTTTC TTCTCACTTAGCGTGACACCCATCTTTGAAGATGACTCGCTGATCTACATGCTACTGGAAGCCCAGCGGATCAAA CATCACCGGCATCGGTCGAATTCCATCAGCGACGATGCCTATCCCAACGAAATTTACAAAATCTTGGTCGACACC GTGAGGGATTATGCCATTTTCATGCTCGATACGCGCGGCCATATTGCGACATGGAATTCGGGCGCCGCTATTCTG AAGGGATACACATCCTCCGAGATCATCGGCCAGCATTTCTCCATCTTTTACGGTCGCGATGACCGCGAAATAAAA AAACCCGTCCGCGAGCTGGAGGTCTGTTTACAAGAAGGAAAACTGGAGGATGAGGGCTGGCGTTATCACAAGGAT GGCAACCGGTTTTGGGCCAATGTCATGATCACTGCCATCTATCAGAACGGCAGCCATGTGGGATTCGTGAAAGTT ACCCGCGACATGACTGAACGCCGGGCGACAGAGGCGCGTTTGATTGACGCCTTTGAAGAATCGGCCAAGCTCAAG TCCGATTTCTTGGCCAACATGTCCCACGAATTGCGCACCCCGATGAATGGCATGCTCTTGGCTTTGACAATGCTA ATGAGGACCGAATTGACTGATGACCAGCGGGAATTCGGATCCATCCTGGAAGACTCAACATCTATCTTGCTGCAG GTCATTAACGATGTCCTAGATTATTCCAAGCTATCGTCGGGAACCTTCCCCTTGAACACAGACGTTGTCCACATC CCCGACGTGATCTCGGCTGTCGTTCGGAATTGTCAGTCGGCGCTGAAGCCCGGTGTCAAAATCATGGGCGATGTA AGCGCGGGCTTTCCTCCAAACCTCAAAGGTGACCCGCTGCGATTCCGCCAAGTTCTGCAAAATATGGTCACCAAC GCAGTGAAATTCACCGAGAGTGGTCATGTTCGAGTTCATGCCACCTATACCATCGATGAAAAGGACCCCGATATG TATGTAATCTCCACGCAGGTAGTGGACACTGGTATCGGCGTACCCGAAGATGCCTCAAACACCCTCTTCACCCCC TTCACGCGATTCGCGGACACGGCCACAAAAAGGTACCAGGGTACGGGCCTTGGCCTGTCGATATGCAAGAGCCTG GCTGAATTGATGGGTGGAGCGGTTGGTTTCCATGCCAATCCCGACGGACGCGGTAGTGTGTTCTGGATGACAGCC AAAATGGCTCGCCTTACCTCGCCAGTGTCTACAGTGAAGCAGAGATTGCAACCGGCTATACCTGAGGCATTGGAT AATTCCGCCTCGCTCGAGAAGATCGCCCCACACAAACACATCCTCCTTGTCGAAGACAACAAGGTCAATCAACTT ATTATGTTAAAACTTCTCAGCAGCCTGGGTTTCAAGCGCGTCGATGCTGCCTGGGATGGAGCGGAAGCAGTGCGT ATGGTGAAGCAGAAGCCTTTGGCCTATAATGTCATCCTGATGGACATCAGCATGCCGGTCATGGATGGATTAACC GCCACAGAGCACATTCGACGGATGAAACTCGATATGCCCATCCTTGCGTTGACGGGCAATGCTCTCAAGGGAGAC GCAGAGACGTATTTGGCGAAGGGGATGGACGATTACATCGCCAAGCCCTTGCATCGGCAGCAGCTGGTGGATTTA TTATGGAAATGGTGTGGATCCTGAATGGTTGGTTATTTCAAATTGAGAAGGGAATTGTGCCCTCGAATATCACGT CAGTTTGAGGCCGCCTTTTGATGCGCTCAAGGCACGGCAGTTGAAATATACCCGTGTCAGTGTCATGGACGAGAG ACCTTGCGGTCGAACCGTCAGTTTGAGAATTTTCAACCACATCCCCTTACCGATGTGGCAGAAGTGCCGCCATTT TCACCTGAACCTTCCAGGCAACAGTCTGCCTATGTCTTTAGTTCTGGGATTTCTGGGAGTTCATTCAAATTTTGA TCTCCAGTTCTCCGCTAATAACCTGCACCCGAACATCGACGGCAATGCCATCCGCCGACATAAAGTTCTCTGCAC ATGAGATACCCCAAGGGCTTCCATCCTTTGCTCGCATGACTTCTGCCTGGAAAAGGCACATGCAACCGTGTTTCT GCCACCGACGTTGCAATTATGCAGCCTTGGGTGGTCTTCTGTATCAACTCTTCAATACCACTCATGAGATCATCC CTATCTGCGGAGTTTAGGCAGCCGTGTAGTGTATGGATGATATTTGCGATGCAAGACTCGCATGGTCCCCCGTAG TGTCCATGGCGTTGGAATAGCCGCCAATCCTTTAAATCGTAAATTGATGCACAGTGTGTGGAGTGCATAAGACTG GACTTTTACCATTTGACCACCTGGGCAAGTATCCCCCGATAATCCCACCGAATTGCAAGATGATGCTTTAACATC AACAGTGGATTCAAGCCTGATCTTGGTCCCGAACCGATTCAAGTTTTTCCCAACATTTCCGAATGTACAGTAGCA ACGACCTCATTTCGGCACCAAAGAACCGGAAATCTTTTGGTTATGATTCGACATTCGACGTCTAATGGTCCAAGC CTTGTGCGTTTGATCATGTACTGGTTGCGAGTCAATCTCTCAGGGGTAGTTTTTTTCCCGAGGTACAACACCGGT GATCCGTTAATTTCGCGTGAGGTCATTGTTCTCATATCGGTAATTGCTAGGATCATGTTCGGAGGTTTGAACCCA ATGGAACCTCTACGACCGAAGACGAAGATACATGTTTCTAAGTGTCTTGAATCTCGTCCACTTGATGGGTTGTAA CGACGCGGTTTTTGAGAACTTGCCGAAGAACGCAACCCTTCATATGGACCCCGTGTGACCCGCCTTAACTTTCCG AGGGGTGTTGATTTGGTATGGTCACGTTATGAATGGCATGTTCAACCCTTAGCGAGATCATTACAGGCTAATGGC AAACAGGATAAGCTCTATCCTTGCCCTGTTTGGTTGCCGGGGTCTTAGCATCGTTGGTCAACTGGCTGTCCTTCC TCTTGGGTGGGTTTAG |