Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g905.t1
Gene name
Locationscaffold_01:2409089..2409809
Strand+
Gene length (bp)720
Transcript length (bp)720
Coding sequence length (bp)720
Protein length (aa) 240

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01522 Polysacc_deac_1 Polysaccharide deacetylase 2.8E-20 41 167

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Yes
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g905.t1
MLRAILATLFLLVPFYYIYKPPSLLIRYCQRRWPDVLFRVDTDKKVVALTIDDAPSIHTPAILRLLESYNAAATF
FVIGSQIPGHESVLADLVRAGNELANHAMYDEPSRALSDDVLADQMRTVHAGIQEAYVAAGKTEPENWLFRPGSG
VFSSRMRTLVKELGYRLVLGDVYPHDPQVPFWKLNASHILSMVKPGSIIVCHDRREWTVPMLQKVLPELDRRGYR
VVTVSGLLKEIGVN*
Coding >Pro_DTO377G3_2|g905.t1
ATGCTTCGAGCCATCCTCGCCACGTTATTCCTCCTCGTGCCATTTTATTACATATACAAACCTCCAAGTCTACTC
ATTCGTTACTGTCAACGGCGCTGGCCGGATGTACTTTTCCGCGTAGACACAGACAAAAAAGTGGTTGCGTTAACG
ATTGACGATGCGCCCTCCATACACACACCTGCAATCCTCCGTCTATTGGAATCGTACAATGCAGCTGCGACTTTC
TTCGTGATAGGATCTCAGATCCCAGGACACGAATCTGTCTTGGCTGACCTCGTCCGGGCTGGCAACGAACTCGCC
AACCATGCCATGTATGATGAGCCATCGCGTGCACTCAGCGATGACGTCTTGGCAGATCAGATGCGGACAGTCCAT
GCTGGAATCCAGGAAGCCTATGTCGCGGCTGGAAAGACAGAACCTGAGAATTGGCTCTTTCGGCCTGGCTCGGGG
GTTTTCAGCTCCCGGATGCGAACGCTTGTAAAGGAGCTGGGATATCGGCTGGTGCTTGGCGATGTGTATCCGCAT
GATCCGCAGGTGCCATTTTGGAAACTGAACGCGAGCCATATTTTGAGTATGGTTAAGCCAGGCAGTATTATTGTC
TGCCACGATCGCAGGGAGTGGACGGTGCCTATGTTACAGAAGGTGTTGCCGGAGCTGGACCGCAGAGGGTACCGC
GTTGTCACAGTCTCTGGGTTATTGAAAGAGATTGGCGTAAATTGA
Transcript >Pro_DTO377G3_2|g905.t1
ATGCTTCGAGCCATCCTCGCCACGTTATTCCTCCTCGTGCCATTTTATTACATATACAAACCTCCAAGTCTACTC
ATTCGTTACTGTCAACGGCGCTGGCCGGATGTACTTTTCCGCGTAGACACAGACAAAAAAGTGGTTGCGTTAACG
ATTGACGATGCGCCCTCCATACACACACCTGCAATCCTCCGTCTATTGGAATCGTACAATGCAGCTGCGACTTTC
TTCGTGATAGGATCTCAGATCCCAGGACACGAATCTGTCTTGGCTGACCTCGTCCGGGCTGGCAACGAACTCGCC
AACCATGCCATGTATGATGAGCCATCGCGTGCACTCAGCGATGACGTCTTGGCAGATCAGATGCGGACAGTCCAT
GCTGGAATCCAGGAAGCCTATGTCGCGGCTGGAAAGACAGAACCTGAGAATTGGCTCTTTCGGCCTGGCTCGGGG
GTTTTCAGCTCCCGGATGCGAACGCTTGTAAAGGAGCTGGGATATCGGCTGGTGCTTGGCGATGTGTATCCGCAT
GATCCGCAGGTGCCATTTTGGAAACTGAACGCGAGCCATATTTTGAGTATGGTTAAGCCAGGCAGTATTATTGTC
TGCCACGATCGCAGGGAGTGGACGGTGCCTATGTTACAGAAGGTGTTGCCGGAGCTGGACCGCAGAGGGTACCGC
GTTGTCACAGTCTCTGGGTTATTGAAAGAGATTGGCGTAAATTGA
Gene >Pro_DTO377G3_2|g905.t1
ATGCTTCGAGCCATCCTCGCCACGTTATTCCTCCTCGTGCCATTTTATTACATATACAAACCTCCAAGTCTACTC
ATTCGTTACTGTCAACGGCGCTGGCCGGATGTACTTTTCCGCGTAGACACAGACAAAAAAGTGGTTGCGTTAACG
ATTGACGATGCGCCCTCCATACACACACCTGCAATCCTCCGTCTATTGGAATCGTACAATGCAGCTGCGACTTTC
TTCGTGATAGGATCTCAGATCCCAGGACACGAATCTGTCTTGGCTGACCTCGTCCGGGCTGGCAACGAACTCGCC
AACCATGCCATGTATGATGAGCCATCGCGTGCACTCAGCGATGACGTCTTGGCAGATCAGATGCGGACAGTCCAT
GCTGGAATCCAGGAAGCCTATGTCGCGGCTGGAAAGACAGAACCTGAGAATTGGCTCTTTCGGCCTGGCTCGGGG
GTTTTCAGCTCCCGGATGCGAACGCTTGTAAAGGAGCTGGGATATCGGCTGGTGCTTGGCGATGTGTATCCGCAT
GATCCGCAGGTGCCATTTTGGAAACTGAACGCGAGCCATATTTTGAGTATGGTTAAGCCAGGCAGTATTATTGTC
TGCCACGATCGCAGGGAGTGGACGGTGCCTATGTTACAGAAGGTGTTGCCGGAGCTGGACCGCAGAGGGTACCGC
GTTGTCACAGTCTCTGGGTTATTGAAAGAGATTGGCGTAAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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