Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9049.t1
Gene name
Locationscaffold_40:164136..165073
Strand+
Gene length (bp)937
Transcript length (bp)777
Coding sequence length (bp)777
Protein length (aa) 259

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05057 DUF676 Putative serine esterase (DUF676) 4.1E-08 47 245

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 0.34 0.0 0.90
5d_25C Five days - 25 degrees Celsius 0.00 0.0 0.00
7d_25C Seven days - 25 degrees Celsius 0.00 0.0 0.00
10d_25C Ten days - 25 degrees Celsius 0.00 0.0 0.00
7d_15C Seven days - 15 degrees Celsius 0.00 0.0 0.00
7d_30C Seven days - 30 degrees Celsius 0.06 0.0 0.26

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 1.0 no
3d_25C 7d_25C 1.0 no
3d_25C 7d_15C 1.0 no
3d_25C 7d_30C 1.0 no
3d_25C 10d_25C 1.0 no
5d_25C 7d_25C 1.0 no
5d_25C 7d_15C 1.0 no
5d_25C 7d_30C 1.0 no
5d_25C 10d_25C 1.0 no
7d_25C 7d_15C 1.0 no
7d_25C 7d_30C 1.0 no
7d_25C 10d_25C 1.0 no
7d_15C 7d_30C 1.0 no
7d_15C 10d_25C 1.0 no
7d_30C 10d_25C 1.0 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9049.t1
MFNFLICAALSPLQVVLFRGSVCMKRERITIFSPSDVTSRDTFLADIVYVHGLDSNPLTTTERSSEKVSWVRDLL
PKENLNCRIMAFNYDTRWMSNALSKSLKDLGDDLIHALASKRETLEEKSRPIILIGYSFGGLIIDQAVVNMVQNS
DLEPEILESLGGFVFLSTPHRGSKLTPIGEIISLFGYWRGSDTALLKVMKVGSDASDDLYDRIHSFIYEKDMSRK
TLCVFEAQREFLWGIAITHVSFQIPRICDMQLI*
Coding >Pro_DTO377G3_2|g9049.t1
ATGTTCAATTTTTTGATATGTGCTGCTCTATCCCCTTTGCAGGTTGTTCTTTTCCGAGGCTCTGTGTGTATGAAG
CGAGAGCGCATCACAATCTTTTCCCCCTCCGACGTGACCTCCCGAGATACCTTTCTTGCCGATATCGTCTACGTT
CACGGTCTTGATTCGAATCCACTGACAACTACAGAACGCTCATCTGAAAAGGTGTCATGGGTTCGTGATCTGTTA
CCGAAAGAAAATTTGAACTGTCGCATCATGGCCTTTAATTACGATACGAGATGGATGAGCAATGCCCTGAGCAAG
TCGTTAAAAGATTTGGGCGATGACTTGATTCACGCTCTCGCCAGTAAGCGAGAGACCCTAGAGGAGAAAAGCCGA
CCTATCATTTTGATTGGCTATAGTTTTGGTGGTTTAATCATCGACCAGGCTGTGGTGAACATGGTGCAAAATAGC
GATTTGGAACCTGAAATTCTCGAGAGTCTGGGAGGATTTGTCTTTTTGAGCACGCCGCATCGAGGTTCAAAACTC
ACTCCTATTGGAGAGATAATTTCTCTTTTTGGATACTGGAGGGGTTCAGATACCGCTCTTTTGAAAGTTATGAAA
GTTGGCTCAGATGCTAGTGACGACTTATACGATCGAATTCACTCTTTTATCTACGAAAAGGATATGTCTCGCAAG
ACTCTTTGCGTTTTTGAAGCTCAGAGAGAATTTCTATGGGGCATAGCAATCACCCATGTGAGCTTTCAAATCCCC
CGCATATGCGATATGCAACTTATATAA
Transcript >Pro_DTO377G3_2|g9049.t1
ATGTTCAATTTTTTGATATGTGCTGCTCTATCCCCTTTGCAGGTTGTTCTTTTCCGAGGCTCTGTGTGTATGAAG
CGAGAGCGCATCACAATCTTTTCCCCCTCCGACGTGACCTCCCGAGATACCTTTCTTGCCGATATCGTCTACGTT
CACGGTCTTGATTCGAATCCACTGACAACTACAGAACGCTCATCTGAAAAGGTGTCATGGGTTCGTGATCTGTTA
CCGAAAGAAAATTTGAACTGTCGCATCATGGCCTTTAATTACGATACGAGATGGATGAGCAATGCCCTGAGCAAG
TCGTTAAAAGATTTGGGCGATGACTTGATTCACGCTCTCGCCAGTAAGCGAGAGACCCTAGAGGAGAAAAGCCGA
CCTATCATTTTGATTGGCTATAGTTTTGGTGGTTTAATCATCGACCAGGCTGTGGTGAACATGGTGCAAAATAGC
GATTTGGAACCTGAAATTCTCGAGAGTCTGGGAGGATTTGTCTTTTTGAGCACGCCGCATCGAGGTTCAAAACTC
ACTCCTATTGGAGAGATAATTTCTCTTTTTGGATACTGGAGGGGTTCAGATACCGCTCTTTTGAAAGTTATGAAA
GTTGGCTCAGATGCTAGTGACGACTTATACGATCGAATTCACTCTTTTATCTACGAAAAGGATATGTCTCGCAAG
ACTCTTTGCGTTTTTGAAGCTCAGAGAGAATTTCTATGGGGCATAGCAATCACCCATGTGAGCTTTCAAATCCCC
CGCATATGCGATATGCAACTTATATAA
Gene >Pro_DTO377G3_2|g9049.t1
ATGTTCAATTTTTTGATATGTGCTGCTCTATCCCCTTTGCAGGTTGTTCTTTTCCGAGGCTCTGTGTGTATGAAG
CGAGAGCGCATCACAATCTTTTCCCCCTCCGACGTGACCTCCCGAGATACCTTTCTTGCCGAGTTTGTGCCCGTA
AATTGTGGTCTCTTCATGGGTTGATGGCTAATTGTCTTGTCAGTATCGTCTACGTTCACGGTCTTGATTCGAATC
CACTGACAACTACAGAACGCTCATCTGAAAAGGTGTCATGGGTTCGTGATCTGTTACCGAAAGAAAATTTGAACT
GTCGCATCATGGCCTTTAATTACGATACGAGATGGATGAGCAATGCCCTGAGCAAGTCGTTAAAAGATTTGGGCG
ATGACTTGATTCACGCTCTCGCCAGTAAGCGAGAGACCCTAGAGGTAAGAGATTGGACTTGATTTCGATTTGAAT
CTAGGTACTTAATTCGTCTAGGAGAAAAGCCGACCTATCATTTTGATTGGCTATAGTTTTGGTGGTTTAATCATC
GACCAGGTAAGGTTGGTTCAGCATCGGGTTATTTTCAGTTGAACTAATAGGGAAACAGGCTGTGGTGAACATGGT
GCAAAATAGCGATTTGGAACCTGAAATTCTCGAGAGTCTGGGAGGATTTGTCTTTTTGAGCACGCCGCATCGAGG
TTCAAAACTCACTCCTATTGGAGAGATAATTTCTCTTTTTGGATACTGGAGGGGTTCAGATACCGCTCTTTTGAA
AGTTATGAAAGTTGGCTCAGATGCTAGTGACGACTTATACGATCGAATTCACTCTTTTATCTACGAAAAGGATAT
GTCTCGCAAGACTCTTTGCGTTTTTGAAGCTCAGAGAGAATTTCTATGGGGCATAGCAATCACCCATGTGAGCTT
TCAAATCCCCCGCATATGCGATATGCAACTTATATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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