Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9040.t1
Gene name
Locationscaffold_40:143328..144470
Strand-
Gene length (bp)1142
Transcript length (bp)1089
Coding sequence length (bp)1089
Protein length (aa) 363

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 1.8E-32 41 218
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 5.5E-21 49 219
PF08659 KR KR domain 4.8E-11 40 197
PF01370 Epimerase NAD dependent epimerase/dehydratase family 5.5E-06 41 177

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 53 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9040.t1
MEQTSPKGGPSSPASREPRLHLPSTTDPPGPQNPAKPLVWLIFGATGHMGRSLVKTALANNDLVAAVGRTYENSP
AAMKELESANCIGLLCDVRARETVKRVIDQTITRFGRIDIIANCSGYGVIGACEDQDEFDIRNQFETNFTGTLNM
IQLSLPHFRQRRAGRYLIFSSTSGALGVPGLGPYCASKYAVEGLMESMLYEVDSFNIKGTLVEPGHMRRDDIGDL
VSPSAVVPNPSEHQLSSPLPLYGHFLVKPPSEPYNTVTSPAAHARRMLMWLGDKQPASAVKAAHLVWQLGHCSYP
PLRLILGTYAVESIRDRLKCIIEEIEDWKYLSFPMGETLPVGGRGGSSFPEGAEGGSELGNG*
Coding >Pro_DTO377G3_2|g9040.t1
ATGGAGCAGACATCCCCAAAAGGAGGTCCCTCCTCTCCAGCATCACGCGAACCAAGACTTCATCTCCCTTCAACA
ACCGATCCCCCGGGTCCCCAGAACCCCGCCAAACCGCTCGTATGGCTGATCTTCGGCGCAACCGGCCACATGGGC
CGCTCCCTAGTAAAAACCGCCCTCGCCAACAATGACCTAGTAGCAGCCGTCGGACGCACCTACGAGAACAGCCCC
GCAGCAATGAAAGAGCTAGAATCAGCCAACTGCATCGGACTCCTATGCGACGTACGAGCGCGAGAGACCGTCAAG
CGCGTAATTGACCAAACAATAACCCGCTTCGGCCGAATTGACATAATCGCAAACTGCTCCGGCTACGGCGTCATC
GGCGCCTGCGAAGACCAAGATGAATTCGACATCCGCAACCAGTTCGAAACAAACTTCACAGGAACCCTGAACATG
ATCCAGCTCTCGCTACCGCATTTCCGTCAGCGTCGCGCGGGGAGATACCTCATTTTCAGCTCGACGTCTGGCGCG
CTCGGTGTGCCGGGCCTCGGACCATACTGTGCATCCAAATACGCCGTCGAGGGCTTGATGGAGAGTATGCTGTAT
GAGGTGGATAGTTTTAATATTAAGGGTACGCTCGTTGAGCCTGGTCATATGCGTCGTGATGATATTGGGGATTTG
GTTTCGCCATCTGCGGTCGTGCCTAACCCTTCTGAACATCAGCTTTCGTCGCCCTTGCCGCTCTACGGCCATTTT
CTGGTTAAGCCGCCCAGTGAGCCGTATAATACGGTTACGTCGCCGGCGGCGCATGCGCGACGTATGCTCATGTGG
CTGGGCGATAAGCAGCCTGCTAGTGCGGTAAAGGCGGCGCATTTGGTTTGGCAGCTTGGTCATTGCTCTTACCCG
CCTCTGAGGCTGATTCTGGGTACGTATGCTGTTGAGAGTATACGGGATCGGTTGAAGTGTATTATTGAGGAGATT
GAGGATTGGAAATATCTCAGTTTCCCGATGGGTGAGACTTTGCCGGTTGGAGGGCGTGGGGGATCTTCTTTTCCG
GAGGGAGCTGAAGGGGGGAGCGAATTGGGTAATGGATAA
Transcript >Pro_DTO377G3_2|g9040.t1
ATGGAGCAGACATCCCCAAAAGGAGGTCCCTCCTCTCCAGCATCACGCGAACCAAGACTTCATCTCCCTTCAACA
ACCGATCCCCCGGGTCCCCAGAACCCCGCCAAACCGCTCGTATGGCTGATCTTCGGCGCAACCGGCCACATGGGC
CGCTCCCTAGTAAAAACCGCCCTCGCCAACAATGACCTAGTAGCAGCCGTCGGACGCACCTACGAGAACAGCCCC
GCAGCAATGAAAGAGCTAGAATCAGCCAACTGCATCGGACTCCTATGCGACGTACGAGCGCGAGAGACCGTCAAG
CGCGTAATTGACCAAACAATAACCCGCTTCGGCCGAATTGACATAATCGCAAACTGCTCCGGCTACGGCGTCATC
GGCGCCTGCGAAGACCAAGATGAATTCGACATCCGCAACCAGTTCGAAACAAACTTCACAGGAACCCTGAACATG
ATCCAGCTCTCGCTACCGCATTTCCGTCAGCGTCGCGCGGGGAGATACCTCATTTTCAGCTCGACGTCTGGCGCG
CTCGGTGTGCCGGGCCTCGGACCATACTGTGCATCCAAATACGCCGTCGAGGGCTTGATGGAGAGTATGCTGTAT
GAGGTGGATAGTTTTAATATTAAGGGTACGCTCGTTGAGCCTGGTCATATGCGTCGTGATGATATTGGGGATTTG
GTTTCGCCATCTGCGGTCGTGCCTAACCCTTCTGAACATCAGCTTTCGTCGCCCTTGCCGCTCTACGGCCATTTT
CTGGTTAAGCCGCCCAGTGAGCCGTATAATACGGTTACGTCGCCGGCGGCGCATGCGCGACGTATGCTCATGTGG
CTGGGCGATAAGCAGCCTGCTAGTGCGGTAAAGGCGGCGCATTTGGTTTGGCAGCTTGGTCATTGCTCTTACCCG
CCTCTGAGGCTGATTCTGGGTACGTATGCTGTTGAGAGTATACGGGATCGGTTGAAGTGTATTATTGAGGAGATT
GAGGATTGGAAATATCTCAGTTTCCCGATGGGTGAGACTTTGCCGGTTGGAGGGCGTGGGGGATCTTCTTTTCCG
GAGGGAGCTGAAGGGGGGAGCGAATTGGGTAATGGATAA
Gene >Pro_DTO377G3_2|g9040.t1
ATGGAGCAGACATCCCCAAAAGGAGGTCCCTCCTCTCCAGCATCACGCGAACCAAGACTTCATCTCCCTTCAACA
ACCGATCCCCCGGGTCCCCAGAACCCCGCCAAACCGCTCGTATGGCTGGTATACAACCCCTCCCTAAGCAAAAAC
CCCAAGAAACACTAACACACCCCCAGATCTTCGGCGCAACCGGCCACATGGGCCGCTCCCTAGTAAAAACCGCCC
TCGCCAACAATGACCTAGTAGCAGCCGTCGGACGCACCTACGAGAACAGCCCCGCAGCAATGAAAGAGCTAGAAT
CAGCCAACTGCATCGGACTCCTATGCGACGTACGAGCGCGAGAGACCGTCAAGCGCGTAATTGACCAAACAATAA
CCCGCTTCGGCCGAATTGACATAATCGCAAACTGCTCCGGCTACGGCGTCATCGGCGCCTGCGAAGACCAAGATG
AATTCGACATCCGCAACCAGTTCGAAACAAACTTCACAGGAACCCTGAACATGATCCAGCTCTCGCTACCGCATT
TCCGTCAGCGTCGCGCGGGGAGATACCTCATTTTCAGCTCGACGTCTGGCGCGCTCGGTGTGCCGGGCCTCGGAC
CATACTGTGCATCCAAATACGCCGTCGAGGGCTTGATGGAGAGTATGCTGTATGAGGTGGATAGTTTTAATATTA
AGGGTACGCTCGTTGAGCCTGGTCATATGCGTCGTGATGATATTGGGGATTTGGTTTCGCCATCTGCGGTCGTGC
CTAACCCTTCTGAACATCAGCTTTCGTCGCCCTTGCCGCTCTACGGCCATTTTCTGGTTAAGCCGCCCAGTGAGC
CGTATAATACGGTTACGTCGCCGGCGGCGCATGCGCGACGTATGCTCATGTGGCTGGGCGATAAGCAGCCTGCTA
GTGCGGTAAAGGCGGCGCATTTGGTTTGGCAGCTTGGTCATTGCTCTTACCCGCCTCTGAGGCTGATTCTGGGTA
CGTATGCTGTTGAGAGTATACGGGATCGGTTGAAGTGTATTATTGAGGAGATTGAGGATTGGAAATATCTCAGTT
TCCCGATGGGTGAGACTTTGCCGGTTGGAGGGCGTGGGGGATCTTCTTTTCCGGAGGGAGCTGAAGGGGGGAGCG
AATTGGGTAATGGATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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