Protein ID | Pro_DTO377G3_2|g9033.t1 |
Gene name | |
Location | scaffold_40:118396..120168 |
Strand | - |
Gene length (bp) | 1772 |
Transcript length (bp) | 1659 |
Coding sequence length (bp) | 1659 |
Protein length (aa) | 553 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10396 | TrmE_N | GTP-binding protein TrmE N-terminus | 2.3E-38 | 7 | 133 |
PF12631 | MnmE_helical | MnmE helical domain | 2.1E-29 | 136 | 549 |
PF01926 | MMR_HSR1 | 50S ribosome-binding GTPase | 4.4E-17 | 235 | 334 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005525 | GTP binding | Yes |
GO:0019001 | guanyl nucleotide binding | No |
GO:0036094 | small molecule binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0003674 | molecular_function | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043168 | anion binding | No |
GO:0000166 | nucleotide binding | No |
GO:0032561 | guanyl ribonucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0043167 | ion binding | No |
GO:0005488 | binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0017076 | purine nucleotide binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 32 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g9033.t1 MLDGDSTIYALSTATGRAAIAVVRVSGPACASIYKSLCPNHPLPKPRYAALRTLYDPTQPPTANTILDAGALVLY FPSPRTATGEDILELHIHGGPAITKAVLSAIAQTNTPEQTVRYAEPGEFTRRAFMNDRLSLPQIEALGDTLSADT EQQRRLAVRGSSDALLNRYERWRQGLLYARGELEALIDFSEDQHFDESTEELVSSVAAQVRTLSVQIGFHIANAS RGELLRNGIRVALLGAPNAGKSSLLNRVVGKEAAIVSTEQGTTRDIVDIGVDLGGWYCKLGDMAGIRAEGSSGDG EGVVIGAVEKEGIRRARERALESDVVIVVLSLEDTATGVQLFVEPEVLGAVNDCVEAGKCLVVAVNKCDKLHTAM ESGVPQSLSDTIHDIFPSVPVDRVFTISCEEARQGASSLNTTTDPGNLQVFLRGLIATFEQIASPLGVGGDGGQY DISYWEDSLGVSHRQSSNLQICLDHLDDFLSQASSAECHDSSSRERELGPLDSHVESEVDIVTAAEHLRFAADML AKITGKGESGDVEDVLGVVFEKFCVGK* |
Coding | >Pro_DTO377G3_2|g9033.t1 ATGCTAGATGGAGACTCTACAATATATGCGCTCTCTACTGCAACTGGACGAGCAGCCATTGCAGTCGTGCGTGTA TCGGGTCCGGCATGTGCCTCGATATACAAGAGTCTCTGCCCAAACCACCCGCTTCCAAAACCGCGCTATGCAGCC CTCCGCACCCTCTATGACCCAACCCAACCCCCAACCGCAAACACAATCCTCGATGCCGGCGCCTTAGTCCTCTAC TTCCCCTCCCCACGAACCGCAACAGGCGAAGACATCCTCGAACTACACATCCACGGCGGCCCCGCAATAACAAAA GCCGTCCTTTCAGCAATCGCACAGACAAACACCCCAGAGCAAACAGTGCGCTACGCCGAACCAGGCGAATTCACC CGCCGCGCCTTCATGAACGACCGTCTCAGCCTGCCTCAGATTGAAGCACTCGGCGACACTTTGTCCGCCGATACC GAGCAGCAGCGACGACTAGCTGTGCGTGGCTCCAGCGACGCATTGCTGAATCGATACGAGCGGTGGCGGCAGGGT CTGCTGTATGCGCGCGGCGAGCTGGAGGCGCTGATTGATTTCTCTGAGGATCAGCATTTCGATGAGTCCACCGAG GAGCTTGTTTCTTCTGTTGCGGCCCAAGTGCGCACGTTGAGCGTGCAGATCGGTTTCCATATTGCTAATGCGTCG CGGGGCGAGTTGCTTAGGAATGGGATTCGGGTTGCGCTATTGGGTGCGCCGAATGCTGGCAAGAGTTCCTTGCTT AACCGGGTTGTTGGGAAGGAGGCTGCTATTGTTAGTACTGAGCAAGGGACTACGAGGGATATTGTCGATATTGGG GTTGATCTTGGAGGATGGTATTGTAAGCTTGGGGATATGGCGGGGATCCGGGCTGAGGGTAGCTCTGGTGATGGT GAGGGGGTTGTTATTGGAGCCGTTGAGAAAGAGGGCATTCGCCGGGCTAGGGAGAGGGCGTTGGAGTCTGATGTT GTTATTGTGGTTCTTTCGCTGGAAGACACTGCCACTGGCGTCCAGCTATTCGTTGAGCCGGAGGTTCTGGGTGCT GTTAATGACTGCGTGGAAGCAGGCAAGTGCCTCGTTGTGGCTGTCAACAAATGCGACAAGCTACACACTGCCATG GAAAGTGGTGTGCCGCAGTCATTGTCAGATACGATCCACGACATCTTCCCTTCGGTCCCGGTAGACCGTGTATTT ACCATTTCCTGCGAGGAAGCCCGTCAGGGAGCATCGTCTCTCAATACCACTACAGACCCGGGTAATCTACAGGTC TTTCTACGTGGACTAATTGCGACGTTTGAGCAGATTGCCTCGCCTCTTGGCGTGGGCGGAGATGGAGGTCAATAT GATATCTCGTATTGGGAAGATTCTCTAGGTGTCTCGCATCGCCAAAGCTCTAATCTTCAAATATGTCTCGATCAT CTGGACGACTTCCTATCTCAAGCATCTTCTGCTGAATGTCATGATAGTTCCTCGCGCGAGAGAGAACTCGGTCCT CTTGATTCCCATGTTGAATCTGAAGTCGATATCGTCACTGCTGCGGAACATCTGCGCTTTGCGGCTGATATGCTG GCTAAGATCACAGGAAAAGGCGAGAGTGGAGATGTCGAGGATGTGTTGGGGGTTGTCTTTGAGAAATTCTGTGTC GGCAAATGA |
Transcript | >Pro_DTO377G3_2|g9033.t1 ATGCTAGATGGAGACTCTACAATATATGCGCTCTCTACTGCAACTGGACGAGCAGCCATTGCAGTCGTGCGTGTA TCGGGTCCGGCATGTGCCTCGATATACAAGAGTCTCTGCCCAAACCACCCGCTTCCAAAACCGCGCTATGCAGCC CTCCGCACCCTCTATGACCCAACCCAACCCCCAACCGCAAACACAATCCTCGATGCCGGCGCCTTAGTCCTCTAC TTCCCCTCCCCACGAACCGCAACAGGCGAAGACATCCTCGAACTACACATCCACGGCGGCCCCGCAATAACAAAA GCCGTCCTTTCAGCAATCGCACAGACAAACACCCCAGAGCAAACAGTGCGCTACGCCGAACCAGGCGAATTCACC CGCCGCGCCTTCATGAACGACCGTCTCAGCCTGCCTCAGATTGAAGCACTCGGCGACACTTTGTCCGCCGATACC GAGCAGCAGCGACGACTAGCTGTGCGTGGCTCCAGCGACGCATTGCTGAATCGATACGAGCGGTGGCGGCAGGGT CTGCTGTATGCGCGCGGCGAGCTGGAGGCGCTGATTGATTTCTCTGAGGATCAGCATTTCGATGAGTCCACCGAG GAGCTTGTTTCTTCTGTTGCGGCCCAAGTGCGCACGTTGAGCGTGCAGATCGGTTTCCATATTGCTAATGCGTCG CGGGGCGAGTTGCTTAGGAATGGGATTCGGGTTGCGCTATTGGGTGCGCCGAATGCTGGCAAGAGTTCCTTGCTT AACCGGGTTGTTGGGAAGGAGGCTGCTATTGTTAGTACTGAGCAAGGGACTACGAGGGATATTGTCGATATTGGG GTTGATCTTGGAGGATGGTATTGTAAGCTTGGGGATATGGCGGGGATCCGGGCTGAGGGTAGCTCTGGTGATGGT GAGGGGGTTGTTATTGGAGCCGTTGAGAAAGAGGGCATTCGCCGGGCTAGGGAGAGGGCGTTGGAGTCTGATGTT GTTATTGTGGTTCTTTCGCTGGAAGACACTGCCACTGGCGTCCAGCTATTCGTTGAGCCGGAGGTTCTGGGTGCT GTTAATGACTGCGTGGAAGCAGGCAAGTGCCTCGTTGTGGCTGTCAACAAATGCGACAAGCTACACACTGCCATG GAAAGTGGTGTGCCGCAGTCATTGTCAGATACGATCCACGACATCTTCCCTTCGGTCCCGGTAGACCGTGTATTT ACCATTTCCTGCGAGGAAGCCCGTCAGGGAGCATCGTCTCTCAATACCACTACAGACCCGGGTAATCTACAGGTC TTTCTACGTGGACTAATTGCGACGTTTGAGCAGATTGCCTCGCCTCTTGGCGTGGGCGGAGATGGAGGTCAATAT GATATCTCGTATTGGGAAGATTCTCTAGGTGTCTCGCATCGCCAAAGCTCTAATCTTCAAATATGTCTCGATCAT CTGGACGACTTCCTATCTCAAGCATCTTCTGCTGAATGTCATGATAGTTCCTCGCGCGAGAGAGAACTCGGTCCT CTTGATTCCCATGTTGAATCTGAAGTCGATATCGTCACTGCTGCGGAACATCTGCGCTTTGCGGCTGATATGCTG GCTAAGATCACAGGAAAAGGCGAGAGTGGAGATGTCGAGGATGTGTTGGGGGTTGTCTTTGAGAAATTCTGTGTC GGCAAATGA |
Gene | >Pro_DTO377G3_2|g9033.t1 ATGCTAGATGGAGACTCTACAATATATGCGCTCTCTACTGCAACTGGACGAGCAGCCATTGCAGTCGTGCGTGTA TCGGGTCCGGCATGTGCCTCGGTATGTATTCCTCGAAGAACTACTAAAGCACCAGACTAACAATGCCATTCAGAT ATACAAGAGTCTCTGCCCAAACCACCCGCTTCCAAAACCGCGCTATGCAGCCCTCCGCACCCTCTATGACCCAAC CCAACCCCCAACCGCAAACACAATCCTCGATGCCGGCGCCTTAGTCCTCTACTTCCCCTCCCCACGAACCGCAAC AGGCGAAGACATCCTCGAACTACACATCCACGGCGGCCCCGCAATAACAAAAGCCGTCCTTTCAGCAATCGCACA GACAAACACCCCAGAGCAAACAGTGCGCTACGCCGAACCAGGCGAATTCACCCGCCGCGCCTTCATGAACGACCG TCTCAGCCTGCCTCAGATTGAAGCACTCGGCGACACTTTGTCCGCCGATACCGAGCAGCAGCGACGACTAGCTGT GCGTGGCTCCAGCGACGCATTGCTGAATCGATACGAGCGGTGGCGGCAGGGTCTGCTGTATGCGCGCGGCGAGCT GGAGGCGCTGATTGATTTCTCTGAGGATCAGCATTTCGATGAGTCCACCGAGGAGCTTGTTTCTTCTGTTGCGGC CCAAGTGCGCACGTTGAGCGTGCAGATCGGTTTCCATATTGCTAATGCGTCGCGGGGCGAGTTGCTTAGGAATGG GATTCGGGTTGCGCTATTGGGTGCGCCGAATGCTGGCAAGAGTTCCTTGCTTAACCGGGTTGTTGGGAAGGAGGC TGCTATTGTTAGTACTGAGCAAGGGACTACGAGGGATATTGTCGATATTGGGGTTGATCTTGGAGGATGGTATTG TAAGCTTGGGGATATGGCGGGGATCCGGGCTGAGGGTAGCTCTGGTGATGGTGAGGGGGTTGTTATTGGAGCCGT TGAGAAAGAGGGCATTCGCCGGGCTAGGGAGAGGGCGTTGGAGTCTGATGTTGTTATTGTGGTTCTTTCGCTGGA AGACACTGCCACTGGCGTCCAGCTATTCGTTGAGCCGGAGGTTCTGGGTGCTGTTAATGACTGCGTGGAAGCAGG CAAGTGCCTCGTTGTGGCTGTCAACAAATGCGACAAGCTACACACTGCCATGGAAAGTGGTGTGCCGCAGTCATT GTCAGATACGATCCACGACATCTTCCCTTCGGTCCCGGTAGACCGTGTATTTACCATTTCCTGCGAGGAAGCCCG TCAGGGAGCATCGTCTCTCAATACCACTACAGACCCGGGTAATCTACAGGTCTTTCTACGTGGACTAATTGCGAC GTTTGAGCAGATTGCCTCGCCTCTTGGCGTGGGCGGAGATGGAGGTCAATATGATATCTCGTATTGGGAAGATTC TCTAGGTGTCTCGCATCGCCAAAGCTCTAATCTTCAAATATGTCTCGATCATCTGGACGACTTCCTATCTCAAGC ATCTTCTGCTGAATGTCATGATAGTTCCTCGCGCGAGAGAGAACTCGGTCCTCTTGATTCCCATGTTGAATCTGA AGTCGATATCGTCACTGCTGCGGAACATCTGCGCTTTGCGGCTGATATGCTGGCTAAGATCACAGGAAAAGGCGA GAGTGGAGATGTCGAGGATGTGTTGGGGGTTGTCTTTGAGAAGTAAGTACTGGAGGGTCTTTGTCTTGGTTTGCT GGTCTGGATGGCGAGCTGACTGTCGTAGATTCTGTGTCGGCAAATGA |