Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9033.t1
Gene name
Locationscaffold_40:118396..120168
Strand-
Gene length (bp)1772
Transcript length (bp)1659
Coding sequence length (bp)1659
Protein length (aa) 553

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10396 TrmE_N GTP-binding protein TrmE N-terminus 2.3E-38 7 133
PF12631 MnmE_helical MnmE helical domain 2.1E-29 136 549
PF01926 MMR_HSR1 50S ribosome-binding GTPase 4.4E-17 235 334

GO

GO Term Description Terminal node
GO:0005525 GTP binding Yes
GO:0019001 guanyl nucleotide binding No
GO:0036094 small molecule binding No
GO:0032553 ribonucleotide binding No
GO:0003674 molecular_function No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:1901363 heterocyclic compound binding No
GO:0043168 anion binding No
GO:0000166 nucleotide binding No
GO:0032561 guanyl ribonucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No
GO:1901265 nucleoside phosphate binding No
GO:0032555 purine ribonucleotide binding No
GO:0017076 purine nucleotide binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID2
Orthogroup8622
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g9374.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g7697.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g7365.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g4829.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g9697.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g8676.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g8799.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g9443.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g9269.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g6948.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g8139.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g7621.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g8151.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g7652.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g6716.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g9163.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g6623.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g8906.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g8441.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g7676.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g6909.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g9615.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g9662.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g9099.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g9534.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g8655.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g9401.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g3663.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g9039.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g8418.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g8807.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g9423.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g9370.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g9033.t1 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9033.t1
MLDGDSTIYALSTATGRAAIAVVRVSGPACASIYKSLCPNHPLPKPRYAALRTLYDPTQPPTANTILDAGALVLY
FPSPRTATGEDILELHIHGGPAITKAVLSAIAQTNTPEQTVRYAEPGEFTRRAFMNDRLSLPQIEALGDTLSADT
EQQRRLAVRGSSDALLNRYERWRQGLLYARGELEALIDFSEDQHFDESTEELVSSVAAQVRTLSVQIGFHIANAS
RGELLRNGIRVALLGAPNAGKSSLLNRVVGKEAAIVSTEQGTTRDIVDIGVDLGGWYCKLGDMAGIRAEGSSGDG
EGVVIGAVEKEGIRRARERALESDVVIVVLSLEDTATGVQLFVEPEVLGAVNDCVEAGKCLVVAVNKCDKLHTAM
ESGVPQSLSDTIHDIFPSVPVDRVFTISCEEARQGASSLNTTTDPGNLQVFLRGLIATFEQIASPLGVGGDGGQY
DISYWEDSLGVSHRQSSNLQICLDHLDDFLSQASSAECHDSSSRERELGPLDSHVESEVDIVTAAEHLRFAADML
AKITGKGESGDVEDVLGVVFEKFCVGK*
Coding >Pro_DTO377G3_2|g9033.t1
ATGCTAGATGGAGACTCTACAATATATGCGCTCTCTACTGCAACTGGACGAGCAGCCATTGCAGTCGTGCGTGTA
TCGGGTCCGGCATGTGCCTCGATATACAAGAGTCTCTGCCCAAACCACCCGCTTCCAAAACCGCGCTATGCAGCC
CTCCGCACCCTCTATGACCCAACCCAACCCCCAACCGCAAACACAATCCTCGATGCCGGCGCCTTAGTCCTCTAC
TTCCCCTCCCCACGAACCGCAACAGGCGAAGACATCCTCGAACTACACATCCACGGCGGCCCCGCAATAACAAAA
GCCGTCCTTTCAGCAATCGCACAGACAAACACCCCAGAGCAAACAGTGCGCTACGCCGAACCAGGCGAATTCACC
CGCCGCGCCTTCATGAACGACCGTCTCAGCCTGCCTCAGATTGAAGCACTCGGCGACACTTTGTCCGCCGATACC
GAGCAGCAGCGACGACTAGCTGTGCGTGGCTCCAGCGACGCATTGCTGAATCGATACGAGCGGTGGCGGCAGGGT
CTGCTGTATGCGCGCGGCGAGCTGGAGGCGCTGATTGATTTCTCTGAGGATCAGCATTTCGATGAGTCCACCGAG
GAGCTTGTTTCTTCTGTTGCGGCCCAAGTGCGCACGTTGAGCGTGCAGATCGGTTTCCATATTGCTAATGCGTCG
CGGGGCGAGTTGCTTAGGAATGGGATTCGGGTTGCGCTATTGGGTGCGCCGAATGCTGGCAAGAGTTCCTTGCTT
AACCGGGTTGTTGGGAAGGAGGCTGCTATTGTTAGTACTGAGCAAGGGACTACGAGGGATATTGTCGATATTGGG
GTTGATCTTGGAGGATGGTATTGTAAGCTTGGGGATATGGCGGGGATCCGGGCTGAGGGTAGCTCTGGTGATGGT
GAGGGGGTTGTTATTGGAGCCGTTGAGAAAGAGGGCATTCGCCGGGCTAGGGAGAGGGCGTTGGAGTCTGATGTT
GTTATTGTGGTTCTTTCGCTGGAAGACACTGCCACTGGCGTCCAGCTATTCGTTGAGCCGGAGGTTCTGGGTGCT
GTTAATGACTGCGTGGAAGCAGGCAAGTGCCTCGTTGTGGCTGTCAACAAATGCGACAAGCTACACACTGCCATG
GAAAGTGGTGTGCCGCAGTCATTGTCAGATACGATCCACGACATCTTCCCTTCGGTCCCGGTAGACCGTGTATTT
ACCATTTCCTGCGAGGAAGCCCGTCAGGGAGCATCGTCTCTCAATACCACTACAGACCCGGGTAATCTACAGGTC
TTTCTACGTGGACTAATTGCGACGTTTGAGCAGATTGCCTCGCCTCTTGGCGTGGGCGGAGATGGAGGTCAATAT
GATATCTCGTATTGGGAAGATTCTCTAGGTGTCTCGCATCGCCAAAGCTCTAATCTTCAAATATGTCTCGATCAT
CTGGACGACTTCCTATCTCAAGCATCTTCTGCTGAATGTCATGATAGTTCCTCGCGCGAGAGAGAACTCGGTCCT
CTTGATTCCCATGTTGAATCTGAAGTCGATATCGTCACTGCTGCGGAACATCTGCGCTTTGCGGCTGATATGCTG
GCTAAGATCACAGGAAAAGGCGAGAGTGGAGATGTCGAGGATGTGTTGGGGGTTGTCTTTGAGAAATTCTGTGTC
GGCAAATGA
Transcript >Pro_DTO377G3_2|g9033.t1
ATGCTAGATGGAGACTCTACAATATATGCGCTCTCTACTGCAACTGGACGAGCAGCCATTGCAGTCGTGCGTGTA
TCGGGTCCGGCATGTGCCTCGATATACAAGAGTCTCTGCCCAAACCACCCGCTTCCAAAACCGCGCTATGCAGCC
CTCCGCACCCTCTATGACCCAACCCAACCCCCAACCGCAAACACAATCCTCGATGCCGGCGCCTTAGTCCTCTAC
TTCCCCTCCCCACGAACCGCAACAGGCGAAGACATCCTCGAACTACACATCCACGGCGGCCCCGCAATAACAAAA
GCCGTCCTTTCAGCAATCGCACAGACAAACACCCCAGAGCAAACAGTGCGCTACGCCGAACCAGGCGAATTCACC
CGCCGCGCCTTCATGAACGACCGTCTCAGCCTGCCTCAGATTGAAGCACTCGGCGACACTTTGTCCGCCGATACC
GAGCAGCAGCGACGACTAGCTGTGCGTGGCTCCAGCGACGCATTGCTGAATCGATACGAGCGGTGGCGGCAGGGT
CTGCTGTATGCGCGCGGCGAGCTGGAGGCGCTGATTGATTTCTCTGAGGATCAGCATTTCGATGAGTCCACCGAG
GAGCTTGTTTCTTCTGTTGCGGCCCAAGTGCGCACGTTGAGCGTGCAGATCGGTTTCCATATTGCTAATGCGTCG
CGGGGCGAGTTGCTTAGGAATGGGATTCGGGTTGCGCTATTGGGTGCGCCGAATGCTGGCAAGAGTTCCTTGCTT
AACCGGGTTGTTGGGAAGGAGGCTGCTATTGTTAGTACTGAGCAAGGGACTACGAGGGATATTGTCGATATTGGG
GTTGATCTTGGAGGATGGTATTGTAAGCTTGGGGATATGGCGGGGATCCGGGCTGAGGGTAGCTCTGGTGATGGT
GAGGGGGTTGTTATTGGAGCCGTTGAGAAAGAGGGCATTCGCCGGGCTAGGGAGAGGGCGTTGGAGTCTGATGTT
GTTATTGTGGTTCTTTCGCTGGAAGACACTGCCACTGGCGTCCAGCTATTCGTTGAGCCGGAGGTTCTGGGTGCT
GTTAATGACTGCGTGGAAGCAGGCAAGTGCCTCGTTGTGGCTGTCAACAAATGCGACAAGCTACACACTGCCATG
GAAAGTGGTGTGCCGCAGTCATTGTCAGATACGATCCACGACATCTTCCCTTCGGTCCCGGTAGACCGTGTATTT
ACCATTTCCTGCGAGGAAGCCCGTCAGGGAGCATCGTCTCTCAATACCACTACAGACCCGGGTAATCTACAGGTC
TTTCTACGTGGACTAATTGCGACGTTTGAGCAGATTGCCTCGCCTCTTGGCGTGGGCGGAGATGGAGGTCAATAT
GATATCTCGTATTGGGAAGATTCTCTAGGTGTCTCGCATCGCCAAAGCTCTAATCTTCAAATATGTCTCGATCAT
CTGGACGACTTCCTATCTCAAGCATCTTCTGCTGAATGTCATGATAGTTCCTCGCGCGAGAGAGAACTCGGTCCT
CTTGATTCCCATGTTGAATCTGAAGTCGATATCGTCACTGCTGCGGAACATCTGCGCTTTGCGGCTGATATGCTG
GCTAAGATCACAGGAAAAGGCGAGAGTGGAGATGTCGAGGATGTGTTGGGGGTTGTCTTTGAGAAATTCTGTGTC
GGCAAATGA
Gene >Pro_DTO377G3_2|g9033.t1
ATGCTAGATGGAGACTCTACAATATATGCGCTCTCTACTGCAACTGGACGAGCAGCCATTGCAGTCGTGCGTGTA
TCGGGTCCGGCATGTGCCTCGGTATGTATTCCTCGAAGAACTACTAAAGCACCAGACTAACAATGCCATTCAGAT
ATACAAGAGTCTCTGCCCAAACCACCCGCTTCCAAAACCGCGCTATGCAGCCCTCCGCACCCTCTATGACCCAAC
CCAACCCCCAACCGCAAACACAATCCTCGATGCCGGCGCCTTAGTCCTCTACTTCCCCTCCCCACGAACCGCAAC
AGGCGAAGACATCCTCGAACTACACATCCACGGCGGCCCCGCAATAACAAAAGCCGTCCTTTCAGCAATCGCACA
GACAAACACCCCAGAGCAAACAGTGCGCTACGCCGAACCAGGCGAATTCACCCGCCGCGCCTTCATGAACGACCG
TCTCAGCCTGCCTCAGATTGAAGCACTCGGCGACACTTTGTCCGCCGATACCGAGCAGCAGCGACGACTAGCTGT
GCGTGGCTCCAGCGACGCATTGCTGAATCGATACGAGCGGTGGCGGCAGGGTCTGCTGTATGCGCGCGGCGAGCT
GGAGGCGCTGATTGATTTCTCTGAGGATCAGCATTTCGATGAGTCCACCGAGGAGCTTGTTTCTTCTGTTGCGGC
CCAAGTGCGCACGTTGAGCGTGCAGATCGGTTTCCATATTGCTAATGCGTCGCGGGGCGAGTTGCTTAGGAATGG
GATTCGGGTTGCGCTATTGGGTGCGCCGAATGCTGGCAAGAGTTCCTTGCTTAACCGGGTTGTTGGGAAGGAGGC
TGCTATTGTTAGTACTGAGCAAGGGACTACGAGGGATATTGTCGATATTGGGGTTGATCTTGGAGGATGGTATTG
TAAGCTTGGGGATATGGCGGGGATCCGGGCTGAGGGTAGCTCTGGTGATGGTGAGGGGGTTGTTATTGGAGCCGT
TGAGAAAGAGGGCATTCGCCGGGCTAGGGAGAGGGCGTTGGAGTCTGATGTTGTTATTGTGGTTCTTTCGCTGGA
AGACACTGCCACTGGCGTCCAGCTATTCGTTGAGCCGGAGGTTCTGGGTGCTGTTAATGACTGCGTGGAAGCAGG
CAAGTGCCTCGTTGTGGCTGTCAACAAATGCGACAAGCTACACACTGCCATGGAAAGTGGTGTGCCGCAGTCATT
GTCAGATACGATCCACGACATCTTCCCTTCGGTCCCGGTAGACCGTGTATTTACCATTTCCTGCGAGGAAGCCCG
TCAGGGAGCATCGTCTCTCAATACCACTACAGACCCGGGTAATCTACAGGTCTTTCTACGTGGACTAATTGCGAC
GTTTGAGCAGATTGCCTCGCCTCTTGGCGTGGGCGGAGATGGAGGTCAATATGATATCTCGTATTGGGAAGATTC
TCTAGGTGTCTCGCATCGCCAAAGCTCTAATCTTCAAATATGTCTCGATCATCTGGACGACTTCCTATCTCAAGC
ATCTTCTGCTGAATGTCATGATAGTTCCTCGCGCGAGAGAGAACTCGGTCCTCTTGATTCCCATGTTGAATCTGA
AGTCGATATCGTCACTGCTGCGGAACATCTGCGCTTTGCGGCTGATATGCTGGCTAAGATCACAGGAAAAGGCGA
GAGTGGAGATGTCGAGGATGTGTTGGGGGTTGTCTTTGAGAAGTAAGTACTGGAGGGTCTTTGTCTTGGTTTGCT
GGTCTGGATGGCGAGCTGACTGTCGTAGATTCTGTGTCGGCAAATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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