Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9033.t1
Gene name
Locationscaffold_40:118396..120168
Strand-
Gene length (bp)1772
Transcript length (bp)1659
Coding sequence length (bp)1659
Protein length (aa) 553

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10396 TrmE_N GTP-binding protein TrmE N-terminus 5.8E-37 7 133
PF12631 MnmE_helical MnmE helical domain 5.1E-29 136 549
PF01926 MMR_HSR1 50S ribosome-binding GTPase 4.0E-17 235 334

GO

GO Term Description Terminal node
GO:0005525 GTP binding Yes
GO:0097367 carbohydrate derivative binding No
GO:0032549 ribonucleoside binding No
GO:1901363 heterocyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:0097159 organic cyclic compound binding No
GO:0032553 ribonucleotide binding No
GO:0001883 purine nucleoside binding No
GO:0043168 anion binding No
GO:0001882 nucleoside binding No
GO:1901265 nucleoside phosphate binding No
GO:0017076 purine nucleotide binding No
GO:0036094 small molecule binding No
GO:0032561 guanyl ribonucleotide binding No
GO:0032550 purine ribonucleoside binding No
GO:0000166 nucleotide binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0019001 guanyl nucleotide binding No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9033.t1
MLDGDSTIYALSTATGRAAIAVVRVSGPACASIYKSLCPNHPLPKPRYAALRTLYDPTQPPTANTILDAGALVLY
FPSPRTATGEDILELHIHGGPAITKAVLSAIAQTNTPEQTVRYAEPGEFTRRAFMNDRLSLPQIEALGDTLSADT
EQQRRLAVRGSSDALLNRYERWRQGLLYARGELEALIDFSEDQHFDESTEELVSSVAAQVRTLSVQIGFHIANAS
RGELLRNGIRVALLGAPNAGKSSLLNRVVGKEAAIVSTEQGTTRDIVDIGVDLGGWYCKLGDMAGIRAEGSSGDG
EGVVIGAVEKEGIRRARERALESDVVIVVLSLEDTATGVQLFVEPEVLGAVNDCVEAGKCLVVAVNKCDKLHTAM
ESGVPQSLSDTIHDIFPSVPVDRVFTISCEEARQGASSLNTTTDPGNLQVFLRGLIATFEQIASPLGVGGDGGQY
DISYWEDSLGVSHRQSSNLQICLDHLDDFLSQASSAECHDSSSRERELGPLDSHVESEVDIVTAAEHLRFAADML
AKITGKGESGDVEDVLGVVFEKFCVGK*
Coding >Pro_DTO377G3_2|g9033.t1
ATGCTAGATGGAGACTCTACAATATATGCGCTCTCTACTGCAACTGGACGAGCAGCCATTGCAGTCGTGCGTGTA
TCGGGTCCGGCATGTGCCTCGATATACAAGAGTCTCTGCCCAAACCACCCGCTTCCAAAACCGCGCTATGCAGCC
CTCCGCACCCTCTATGACCCAACCCAACCCCCAACCGCAAACACAATCCTCGATGCCGGCGCCTTAGTCCTCTAC
TTCCCCTCCCCACGAACCGCAACAGGCGAAGACATCCTCGAACTACACATCCACGGCGGCCCCGCAATAACAAAA
GCCGTCCTTTCAGCAATCGCACAGACAAACACCCCAGAGCAAACAGTGCGCTACGCCGAACCAGGCGAATTCACC
CGCCGCGCCTTCATGAACGACCGTCTCAGCCTGCCTCAGATTGAAGCACTCGGCGACACTTTGTCCGCCGATACC
GAGCAGCAGCGACGACTAGCTGTGCGTGGCTCCAGCGACGCATTGCTGAATCGATACGAGCGGTGGCGGCAGGGT
CTGCTGTATGCGCGCGGCGAGCTGGAGGCGCTGATTGATTTCTCTGAGGATCAGCATTTCGATGAGTCCACCGAG
GAGCTTGTTTCTTCTGTTGCGGCCCAAGTGCGCACGTTGAGCGTGCAGATCGGTTTCCATATTGCTAATGCGTCG
CGGGGCGAGTTGCTTAGGAATGGGATTCGGGTTGCGCTATTGGGTGCGCCGAATGCTGGCAAGAGTTCCTTGCTT
AACCGGGTTGTTGGGAAGGAGGCTGCTATTGTTAGTACTGAGCAAGGGACTACGAGGGATATTGTCGATATTGGG
GTTGATCTTGGAGGATGGTATTGTAAGCTTGGGGATATGGCGGGGATCCGGGCTGAGGGTAGCTCTGGTGATGGT
GAGGGGGTTGTTATTGGAGCCGTTGAGAAAGAGGGCATTCGCCGGGCTAGGGAGAGGGCGTTGGAGTCTGATGTT
GTTATTGTGGTTCTTTCGCTGGAAGACACTGCCACTGGCGTCCAGCTATTCGTTGAGCCGGAGGTTCTGGGTGCT
GTTAATGACTGCGTGGAAGCAGGCAAGTGCCTCGTTGTGGCTGTCAACAAATGCGACAAGCTACACACTGCCATG
GAAAGTGGTGTGCCGCAGTCATTGTCAGATACGATCCACGACATCTTCCCTTCGGTCCCGGTAGACCGTGTATTT
ACCATTTCCTGCGAGGAAGCCCGTCAGGGAGCATCGTCTCTCAATACCACTACAGACCCGGGTAATCTACAGGTC
TTTCTACGTGGACTAATTGCGACGTTTGAGCAGATTGCCTCGCCTCTTGGCGTGGGCGGAGATGGAGGTCAATAT
GATATCTCGTATTGGGAAGATTCTCTAGGTGTCTCGCATCGCCAAAGCTCTAATCTTCAAATATGTCTCGATCAT
CTGGACGACTTCCTATCTCAAGCATCTTCTGCTGAATGTCATGATAGTTCCTCGCGCGAGAGAGAACTCGGTCCT
CTTGATTCCCATGTTGAATCTGAAGTCGATATCGTCACTGCTGCGGAACATCTGCGCTTTGCGGCTGATATGCTG
GCTAAGATCACAGGAAAAGGCGAGAGTGGAGATGTCGAGGATGTGTTGGGGGTTGTCTTTGAGAAATTCTGTGTC
GGCAAATGA
Transcript >Pro_DTO377G3_2|g9033.t1
ATGCTAGATGGAGACTCTACAATATATGCGCTCTCTACTGCAACTGGACGAGCAGCCATTGCAGTCGTGCGTGTA
TCGGGTCCGGCATGTGCCTCGATATACAAGAGTCTCTGCCCAAACCACCCGCTTCCAAAACCGCGCTATGCAGCC
CTCCGCACCCTCTATGACCCAACCCAACCCCCAACCGCAAACACAATCCTCGATGCCGGCGCCTTAGTCCTCTAC
TTCCCCTCCCCACGAACCGCAACAGGCGAAGACATCCTCGAACTACACATCCACGGCGGCCCCGCAATAACAAAA
GCCGTCCTTTCAGCAATCGCACAGACAAACACCCCAGAGCAAACAGTGCGCTACGCCGAACCAGGCGAATTCACC
CGCCGCGCCTTCATGAACGACCGTCTCAGCCTGCCTCAGATTGAAGCACTCGGCGACACTTTGTCCGCCGATACC
GAGCAGCAGCGACGACTAGCTGTGCGTGGCTCCAGCGACGCATTGCTGAATCGATACGAGCGGTGGCGGCAGGGT
CTGCTGTATGCGCGCGGCGAGCTGGAGGCGCTGATTGATTTCTCTGAGGATCAGCATTTCGATGAGTCCACCGAG
GAGCTTGTTTCTTCTGTTGCGGCCCAAGTGCGCACGTTGAGCGTGCAGATCGGTTTCCATATTGCTAATGCGTCG
CGGGGCGAGTTGCTTAGGAATGGGATTCGGGTTGCGCTATTGGGTGCGCCGAATGCTGGCAAGAGTTCCTTGCTT
AACCGGGTTGTTGGGAAGGAGGCTGCTATTGTTAGTACTGAGCAAGGGACTACGAGGGATATTGTCGATATTGGG
GTTGATCTTGGAGGATGGTATTGTAAGCTTGGGGATATGGCGGGGATCCGGGCTGAGGGTAGCTCTGGTGATGGT
GAGGGGGTTGTTATTGGAGCCGTTGAGAAAGAGGGCATTCGCCGGGCTAGGGAGAGGGCGTTGGAGTCTGATGTT
GTTATTGTGGTTCTTTCGCTGGAAGACACTGCCACTGGCGTCCAGCTATTCGTTGAGCCGGAGGTTCTGGGTGCT
GTTAATGACTGCGTGGAAGCAGGCAAGTGCCTCGTTGTGGCTGTCAACAAATGCGACAAGCTACACACTGCCATG
GAAAGTGGTGTGCCGCAGTCATTGTCAGATACGATCCACGACATCTTCCCTTCGGTCCCGGTAGACCGTGTATTT
ACCATTTCCTGCGAGGAAGCCCGTCAGGGAGCATCGTCTCTCAATACCACTACAGACCCGGGTAATCTACAGGTC
TTTCTACGTGGACTAATTGCGACGTTTGAGCAGATTGCCTCGCCTCTTGGCGTGGGCGGAGATGGAGGTCAATAT
GATATCTCGTATTGGGAAGATTCTCTAGGTGTCTCGCATCGCCAAAGCTCTAATCTTCAAATATGTCTCGATCAT
CTGGACGACTTCCTATCTCAAGCATCTTCTGCTGAATGTCATGATAGTTCCTCGCGCGAGAGAGAACTCGGTCCT
CTTGATTCCCATGTTGAATCTGAAGTCGATATCGTCACTGCTGCGGAACATCTGCGCTTTGCGGCTGATATGCTG
GCTAAGATCACAGGAAAAGGCGAGAGTGGAGATGTCGAGGATGTGTTGGGGGTTGTCTTTGAGAAATTCTGTGTC
GGCAAATGA
Gene >Pro_DTO377G3_2|g9033.t1
ATGCTAGATGGAGACTCTACAATATATGCGCTCTCTACTGCAACTGGACGAGCAGCCATTGCAGTCGTGCGTGTA
TCGGGTCCGGCATGTGCCTCGGTATGTATTCCTCGAAGAACTACTAAAGCACCAGACTAACAATGCCATTCAGAT
ATACAAGAGTCTCTGCCCAAACCACCCGCTTCCAAAACCGCGCTATGCAGCCCTCCGCACCCTCTATGACCCAAC
CCAACCCCCAACCGCAAACACAATCCTCGATGCCGGCGCCTTAGTCCTCTACTTCCCCTCCCCACGAACCGCAAC
AGGCGAAGACATCCTCGAACTACACATCCACGGCGGCCCCGCAATAACAAAAGCCGTCCTTTCAGCAATCGCACA
GACAAACACCCCAGAGCAAACAGTGCGCTACGCCGAACCAGGCGAATTCACCCGCCGCGCCTTCATGAACGACCG
TCTCAGCCTGCCTCAGATTGAAGCACTCGGCGACACTTTGTCCGCCGATACCGAGCAGCAGCGACGACTAGCTGT
GCGTGGCTCCAGCGACGCATTGCTGAATCGATACGAGCGGTGGCGGCAGGGTCTGCTGTATGCGCGCGGCGAGCT
GGAGGCGCTGATTGATTTCTCTGAGGATCAGCATTTCGATGAGTCCACCGAGGAGCTTGTTTCTTCTGTTGCGGC
CCAAGTGCGCACGTTGAGCGTGCAGATCGGTTTCCATATTGCTAATGCGTCGCGGGGCGAGTTGCTTAGGAATGG
GATTCGGGTTGCGCTATTGGGTGCGCCGAATGCTGGCAAGAGTTCCTTGCTTAACCGGGTTGTTGGGAAGGAGGC
TGCTATTGTTAGTACTGAGCAAGGGACTACGAGGGATATTGTCGATATTGGGGTTGATCTTGGAGGATGGTATTG
TAAGCTTGGGGATATGGCGGGGATCCGGGCTGAGGGTAGCTCTGGTGATGGTGAGGGGGTTGTTATTGGAGCCGT
TGAGAAAGAGGGCATTCGCCGGGCTAGGGAGAGGGCGTTGGAGTCTGATGTTGTTATTGTGGTTCTTTCGCTGGA
AGACACTGCCACTGGCGTCCAGCTATTCGTTGAGCCGGAGGTTCTGGGTGCTGTTAATGACTGCGTGGAAGCAGG
CAAGTGCCTCGTTGTGGCTGTCAACAAATGCGACAAGCTACACACTGCCATGGAAAGTGGTGTGCCGCAGTCATT
GTCAGATACGATCCACGACATCTTCCCTTCGGTCCCGGTAGACCGTGTATTTACCATTTCCTGCGAGGAAGCCCG
TCAGGGAGCATCGTCTCTCAATACCACTACAGACCCGGGTAATCTACAGGTCTTTCTACGTGGACTAATTGCGAC
GTTTGAGCAGATTGCCTCGCCTCTTGGCGTGGGCGGAGATGGAGGTCAATATGATATCTCGTATTGGGAAGATTC
TCTAGGTGTCTCGCATCGCCAAAGCTCTAATCTTCAAATATGTCTCGATCATCTGGACGACTTCCTATCTCAAGC
ATCTTCTGCTGAATGTCATGATAGTTCCTCGCGCGAGAGAGAACTCGGTCCTCTTGATTCCCATGTTGAATCTGA
AGTCGATATCGTCACTGCTGCGGAACATCTGCGCTTTGCGGCTGATATGCTGGCTAAGATCACAGGAAAAGGCGA
GAGTGGAGATGTCGAGGATGTGTTGGGGGTTGTCTTTGAGAAGTAAGTACTGGAGGGTCTTTGTCTTGGTTTGCT
GGTCTGGATGGCGAGCTGACTGTCGTAGATTCTGTGTCGGCAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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