Protein ID | Pro_DTO377G3_2|g9019.t1 |
Gene name | |
Location | scaffold_40:91043..92490 |
Strand | + |
Gene length (bp) | 1447 |
Transcript length (bp) | 1386 |
Coding sequence length (bp) | 1386 |
Protein length (aa) | 462 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01715 | IPPT | IPP transferase | 2.4E-67 | 37 | 322 |
PF12874 | zf-met | Zinc-finger of C2H2 type | 5.6E-07 | 401 | 425 |
PF12171 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding | 5.4E-05 | 401 | 426 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g9019.t1 MNPLIAVVGATGTGKSKLAVDLASRFNGEIINGDAMQMYRGLPIITNQIPIEERNGIPHHLLSCIDLDAEAWRIG LFKREALRVIEDIHARGKVPILVGGTHYYTQAVLFKEQLVGEGVDDEGEREQLMEFSTTSNKWPILDSSPEVVLE KLREVDPVMAARWHPRDARKIRRSLEIYFQTGRRASEIYKEQFSQKRKAIDQEEGLLRFENTLVFWVHAEKEVLN ARLDARVDDMVKQGLMTEAEKMSNYLQEKASQGIEVDQTRGVWVSIGFKELAPYFKAIRDGEASEKEIEDLKRNS LELIRIATRQYGTSQVKWIRNKLWQALTEVGETRRLYLLDSSNVSDWSKCITEPSEEIMQLMQQNKLTPDPKSLS QLATAEFSAKEAQEKRVQADPIGKCYTCDVCQKTMASEDQWHIHLNSHQHKRGLKSARKRAQRDEYFRKKELEAQ GIQAPETEPGS* |
Coding | >Pro_DTO377G3_2|g9019.t1 ATGAATCCGCTGATAGCTGTCGTGGGCGCCACAGGCACAGGCAAGTCAAAGCTTGCAGTGGACTTGGCCTCTCGA TTCAATGGTGAAATCATCAATGGCGACGCAATGCAGATGTACCGCGGTTTGCCGATCATAACGAACCAGATCCCG ATAGAGGAACGGAACGGTATCCCTCATCACCTCCTCAGTTGTATCGACTTAGACGCGGAAGCATGGCGCATAGGA CTGTTCAAACGAGAAGCCCTGAGAGTCATTGAAGACATCCACGCCCGTGGCAAGGTCCCCATTCTTGTTGGTGGC ACCCACTATTATACCCAAGCAGTGCTGTTCAAAGAACAGCTTGTGGGCGAGGGGGTGGACGACGAAGGCGAGCGG GAACAGCTCATGGAGTTTAGCACAACCTCGAATAAATGGCCGATTCTGGATTCGTCGCCTGAAGTTGTCTTGGAG AAGCTGCGCGAGGTGGATCCCGTTATGGCTGCGCGATGGCACCCGAGAGATGCACGGAAAATCCGGCGGTCATTA GAAATCTATTTTCAGACAGGGCGGCGAGCATCGGAGATTTATAAAGAGCAATTCTCTCAAAAGAGAAAGGCGATA GACCAGGAGGAAGGGCTGCTACGGTTCGAGAATACATTGGTATTTTGGGTCCATGCCGAGAAGGAGGTCCTCAAC GCACGCCTGGATGCGCGCGTCGATGACATGGTCAAGCAGGGCTTGATGACCGAGGCGGAGAAGATGTCGAACTAC TTGCAGGAGAAAGCCTCGCAGGGAATTGAAGTTGACCAAACACGGGGAGTCTGGGTGTCCATTGGATTCAAGGAA TTGGCGCCATACTTCAAGGCTATCCGGGACGGGGAAGCAAGCGAGAAAGAAATCGAAGATCTCAAACGAAACTCT CTTGAATTAATTCGGATCGCCACACGACAGTACGGAACATCGCAGGTCAAATGGATCCGCAATAAACTCTGGCAA GCACTCACAGAAGTCGGAGAGACACGTCGTCTTTATCTCCTAGACAGTTCCAATGTCAGCGACTGGAGCAAGTGC ATCACTGAGCCGTCCGAAGAGATTATGCAACTGATGCAGCAAAATAAGCTGACCCCCGATCCCAAATCGCTTTCT CAGTTAGCAACGGCGGAGTTCAGCGCGAAGGAAGCCCAGGAAAAGCGTGTGCAGGCAGACCCTATCGGGAAGTGC TACACCTGTGACGTCTGCCAGAAGACAATGGCATCCGAGGACCAGTGGCATATTCATTTAAATAGTCATCAGCAT AAAAGGGGACTCAAGTCTGCGAGGAAGAGGGCACAGCGAGATGAATATTTCCGAAAGAAGGAATTGGAAGCTCAG GGGATTCAGGCCCCTGAAACCGAACCTGGGTCATGA |
Transcript | >Pro_DTO377G3_2|g9019.t1 ATGAATCCGCTGATAGCTGTCGTGGGCGCCACAGGCACAGGCAAGTCAAAGCTTGCAGTGGACTTGGCCTCTCGA TTCAATGGTGAAATCATCAATGGCGACGCAATGCAGATGTACCGCGGTTTGCCGATCATAACGAACCAGATCCCG ATAGAGGAACGGAACGGTATCCCTCATCACCTCCTCAGTTGTATCGACTTAGACGCGGAAGCATGGCGCATAGGA CTGTTCAAACGAGAAGCCCTGAGAGTCATTGAAGACATCCACGCCCGTGGCAAGGTCCCCATTCTTGTTGGTGGC ACCCACTATTATACCCAAGCAGTGCTGTTCAAAGAACAGCTTGTGGGCGAGGGGGTGGACGACGAAGGCGAGCGG GAACAGCTCATGGAGTTTAGCACAACCTCGAATAAATGGCCGATTCTGGATTCGTCGCCTGAAGTTGTCTTGGAG AAGCTGCGCGAGGTGGATCCCGTTATGGCTGCGCGATGGCACCCGAGAGATGCACGGAAAATCCGGCGGTCATTA GAAATCTATTTTCAGACAGGGCGGCGAGCATCGGAGATTTATAAAGAGCAATTCTCTCAAAAGAGAAAGGCGATA GACCAGGAGGAAGGGCTGCTACGGTTCGAGAATACATTGGTATTTTGGGTCCATGCCGAGAAGGAGGTCCTCAAC GCACGCCTGGATGCGCGCGTCGATGACATGGTCAAGCAGGGCTTGATGACCGAGGCGGAGAAGATGTCGAACTAC TTGCAGGAGAAAGCCTCGCAGGGAATTGAAGTTGACCAAACACGGGGAGTCTGGGTGTCCATTGGATTCAAGGAA TTGGCGCCATACTTCAAGGCTATCCGGGACGGGGAAGCAAGCGAGAAAGAAATCGAAGATCTCAAACGAAACTCT CTTGAATTAATTCGGATCGCCACACGACAGTACGGAACATCGCAGGTCAAATGGATCCGCAATAAACTCTGGCAA GCACTCACAGAAGTCGGAGAGACACGTCGTCTTTATCTCCTAGACAGTTCCAATGTCAGCGACTGGAGCAAGTGC ATCACTGAGCCGTCCGAAGAGATTATGCAACTGATGCAGCAAAATAAGCTGACCCCCGATCCCAAATCGCTTTCT CAGTTAGCAACGGCGGAGTTCAGCGCGAAGGAAGCCCAGGAAAAGCGTGTGCAGGCAGACCCTATCGGGAAGTGC TACACCTGTGACGTCTGCCAGAAGACAATGGCATCCGAGGACCAGTGGCATATTCATTTAAATAGTCATCAGCAT AAAAGGGGACTCAAGTCTGCGAGGAAGAGGGCACAGCGAGATGAATATTTCCGAAAGAAGGAATTGGAAGCTCAG GGGATTCAGGCCCCTGAAACCGAACCTGGGTCATGA |
Gene | >Pro_DTO377G3_2|g9019.t1 ATGAATCCGCTGATAGCTGTCGTGGGCGCCACAGGCACAGGCAAGTCAAAGGTAATGACTCCAGGTACCTCCAAA ACTTCCTCCGAACACAATGACTGATAGCTGTAGACAGCTTGCAGTGGACTTGGCCTCTCGATTCAATGGTGAAAT CATCAATGGCGACGCAATGCAGATGTACCGCGGTTTGCCGATCATAACGAACCAGATCCCGATAGAGGAACGGAA CGGTATCCCTCATCACCTCCTCAGTTGTATCGACTTAGACGCGGAAGCATGGCGCATAGGACTGTTCAAACGAGA AGCCCTGAGAGTCATTGAAGACATCCACGCCCGTGGCAAGGTCCCCATTCTTGTTGGTGGCACCCACTATTATAC CCAAGCAGTGCTGTTCAAAGAACAGCTTGTGGGCGAGGGGGTGGACGACGAAGGCGAGCGGGAACAGCTCATGGA GTTTAGCACAACCTCGAATAAATGGCCGATTCTGGATTCGTCGCCTGAAGTTGTCTTGGAGAAGCTGCGCGAGGT GGATCCCGTTATGGCTGCGCGATGGCACCCGAGAGATGCACGGAAAATCCGGCGGTCATTAGAAATCTATTTTCA GACAGGGCGGCGAGCATCGGAGATTTATAAAGAGCAATTCTCTCAAAAGAGAAAGGCGATAGACCAGGAGGAAGG GCTGCTACGGTTCGAGAATACATTGGTATTTTGGGTCCATGCCGAGAAGGAGGTCCTCAACGCACGCCTGGATGC GCGCGTCGATGACATGGTCAAGCAGGGCTTGATGACCGAGGCGGAGAAGATGTCGAACTACTTGCAGGAGAAAGC CTCGCAGGGAATTGAAGTTGACCAAACACGGGGAGTCTGGGTGTCCATTGGATTCAAGGAATTGGCGCCATACTT CAAGGCTATCCGGGACGGGGAAGCAAGCGAGAAAGAAATCGAAGATCTCAAACGAAACTCTCTTGAATTAATTCG GATCGCCACACGACAGTACGGAACATCGCAGGTCAAATGGATCCGCAATAAACTCTGGCAAGCACTCACAGAAGT CGGAGAGACACGTCGTCTTTATCTCCTAGACAGTTCCAATGTCAGCGACTGGAGCAAGTGCATCACTGAGCCGTC CGAAGAGATTATGCAACTGATGCAGCAAAATAAGCTGACCCCCGATCCCAAATCGCTTTCTCAGTTAGCAACGGC GGAGTTCAGCGCGAAGGAAGCCCAGGAAAAGCGTGTGCAGGCAGACCCTATCGGGAAGTGCTACACCTGTGACGT CTGCCAGAAGACAATGGCATCCGAGGACCAGTGGCATATTCATTTAAATAGTCATCAGCATAAAAGGGGACTCAA GTCTGCGAGGAAGAGGGCACAGCGAGATGAATATTTCCGAAAGAAGGAATTGGAAGCTCAGGGGATTCAGGCCCC TGAAACCGAACCTGGGTCATGA |