Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9010.t1
Gene name
Locationscaffold_40:63508..65958
Strand+
Gene length (bp)2450
Transcript length (bp)1779
Coding sequence length (bp)1779
Protein length (aa) 593

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 2.8E-04 279 313
PF00400 WD40 WD domain, G-beta repeat 2.4E-07 331 361
PF00400 WD40 WD domain, G-beta repeat 2.0E-09 368 403
PF00400 WD40 WD domain, G-beta repeat 2.0E-06 409 444
PF00400 WD40 WD domain, G-beta repeat 2.3E-06 456 488
PF00400 WD40 WD domain, G-beta repeat 2.8E-09 505 543
PF00400 WD40 WD domain, G-beta repeat 5.5E-05 549 584
PF08581 Tup_N Tup N-terminal 1.9E-18 15 86

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 118.28 72.27 164.29
5d_25C Five days - 25 degrees Celsius 99.91 61.01 138.81
7d_25C Seven days - 25 degrees Celsius 101.20 61.89 140.51
10d_25C Ten days - 25 degrees Celsius 126.51 77.19 175.84
7d_15C Seven days - 15 degrees Celsius 130.24 78.89 181.60
7d_30C Seven days - 30 degrees Celsius 109.84 67.25 152.42

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.514385 no
3d_25C 7d_25C 0.555886 no
3d_25C 7d_15C 0.742881 no
3d_25C 7d_30C 0.806227 no
3d_25C 10d_25C 0.827065 no
5d_25C 7d_25C 0.971501 no
5d_25C 7d_15C 0.255193 no
5d_25C 7d_30C 0.740389 no
5d_25C 10d_25C 0.315816 no
7d_25C 7d_15C 0.290696 no
7d_25C 7d_30C 0.783249 no
7d_25C 10d_25C 0.355469 no
7d_15C 7d_30C 0.504981 no
7d_15C 10d_25C 0.931822 no
7d_30C 10d_25C 0.596716 no

Orthologs

Orthofinder run ID2
Orthogroup8597
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g9351.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g7674.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g7388.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g4852.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g6254.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g8653.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g8822.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g9466.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g9246.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g7956.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g8116.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g7598.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g8174.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g9307.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g6693.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g9140.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g6600.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g8929.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g8418.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g7653.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g6886.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g9638.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g9639.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g9076.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g8674.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g8632.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g9424.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g3686.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g9062.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g8441.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g8784.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g9400.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g9347.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g9010.t1 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9010.t1
MYNAHRGMVPAPNSRLTELLDQLRQEFESQSRNTGEFEHQYHAVTGQLQEMEMIRQKVYQLEQAQIKIKQDYEAE
IRMLRHELESRGVQSIPSHIGGPAAAHTAPSQAPPPALGHGPSNLFGGIMTNPPGSGPGLAPSLPQDQQPPQHPL
QQPASVAQPGAPQPQQSSFGGYPAGAAVNGYGPPPPPTASPGPGKGRGRVPPGPGTPQQTHIAYPDPRASPQIPR
PTPPNPPLGRTAERPGNMLANWNPDDLPPSQKREGSDWYAVFNPEVQRVLDVELVHHLNHDSVVCCVRFSRDGKY
LATGCNRSAQIFDVTTGQNVATLQDENVDKDGDLYIRSVCFSPDGKYLATGAEDKQIRVWDINQRTIKHIFSGHE
QDIYSLDFAGNGRFIASGSGDKTVRLWDILDGKLVYTLSIEDGVTTVAMSPDGRYVAAGSLDKSVRVWDTTTGYL
VERLESPDGHKDSVYSVAFAPNGRDLVSGSLDKTIKLWELTVPRGMHPHSAVKGGKCIRTFEGHKDFVLSVCLTP
DGAWVMSGSKDRGVQFWDPVTGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWRYSAYTGR*
Coding >Pro_DTO377G3_2|g9010.t1
ATGTACAACGCTCATCGCGGGATGGTACCCGCTCCCAACTCCCGTCTGACGGAGTTGTTGGATCAACTGCGCCAG
GAGTTTGAGAGCCAGTCGCGAAACACCGGTGAATTCGAGCATCAGTATCATGCAGTGACCGGACAGCTCCAGGAG
ATGGAGATGATCCGTCAGAAGGTCTATCAACTGGAACAGGCGCAGATCAAGATCAAGCAAGACTATGAAGCTGAG
ATCCGAATGCTGCGACACGAACTTGAGTCCCGTGGCGTGCAATCTATCCCTTCCCACATCGGCGGACCCGCGGCG
GCTCATACAGCTCCTTCCCAGGCTCCCCCACCTGCCTTGGGCCACGGCCCCAGCAATCTGTTTGGCGGTATCATG
ACCAACCCACCAGGTAGTGGCCCCGGTCTTGCACCTTCCCTTCCCCAGGATCAGCAGCCTCCCCAGCATCCCCTT
CAACAGCCTGCTTCGGTCGCTCAGCCTGGCGCGCCGCAACCCCAGCAGAGCTCCTTTGGAGGATATCCGGCTGGC
GCTGCTGTGAACGGCTATGGGCCGCCTCCACCTCCTACTGCATCCCCAGGCCCTGGTAAGGGCCGTGGTCGCGTT
CCCCCAGGCCCCGGTACCCCCCAGCAAACGCACATCGCCTACCCGGATCCTCGTGCTTCCCCTCAGATCCCTCGC
CCGACTCCTCCGAACCCCCCTCTCGGCCGCACAGCCGAACGTCCAGGAAATATGCTGGCAAACTGGAACCCCGAT
GATTTGCCTCCGTCGCAGAAGCGTGAGGGTTCTGATTGGTATGCCGTGTTCAACCCCGAGGTCCAGCGTGTTCTC
GATGTGGAACTGGTACATCACTTGAACCACGACAGCGTCGTTTGCTGTGTGCGCTTTAGCCGTGACGGCAAATAC
TTGGCTACAGGCTGTAACCGCTCGGCTCAAATCTTCGACGTGACCACCGGTCAAAATGTGGCCACCTTGCAGGAT
GAAAACGTCGACAAGGACGGCGACTTATACATTCGCAGCGTTTGCTTCAGTCCGGATGGCAAATATCTTGCGACT
GGTGCTGAAGATAAGCAGATTCGGGTTTGGGATATCAACCAGCGCACCATCAAACATATCTTCAGTGGACACGAG
CAGGACATCTACTCTTTGGACTTTGCTGGCAACGGTCGATTCATCGCCTCTGGCAGTGGAGATAAGACCGTGCGC
CTTTGGGATATTCTCGACGGCAAGCTTGTCTACACCCTTAGCATTGAGGATGGTGTCACTACTGTGGCCATGTCT
CCGGATGGCCGTTACGTAGCCGCGGGCTCGTTGGACAAGAGCGTGCGCGTTTGGGACACTACAACTGGATACCTG
GTAGAACGCCTAGAGAGCCCAGATGGCCACAAGGACAGTGTTTACTCGGTCGCGTTTGCACCCAATGGCCGTGAC
CTTGTCAGTGGCAGTCTGGACAAGACTATCAAGCTCTGGGAGCTTACCGTTCCCCGGGGCATGCACCCTCACAGT
GCCGTCAAGGGCGGCAAGTGTATTCGTACATTCGAGGGCCACAAGGACTTTGTTCTCAGTGTGTGCCTGACACCC
GACGGTGCTTGGGTGATGAGTGGTTCCAAGGACCGTGGTGTTCAGTTCTGGGACCCAGTGACTGGAAATGCCCAA
ATGATGCTTCAAGGCCACAAGAACTCTGTCATCTCGGTTGCACCCAGTCCTACTGGCAACCTGTTCGCGACCGGC
AGTGGAGACATGCGTGCACGAATCTGGAGATACTCGGCGTATACTGGACGATGA
Transcript >Pro_DTO377G3_2|g9010.t1
ATGTACAACGCTCATCGCGGGATGGTACCCGCTCCCAACTCCCGTCTGACGGAGTTGTTGGATCAACTGCGCCAG
GAGTTTGAGAGCCAGTCGCGAAACACCGGTGAATTCGAGCATCAGTATCATGCAGTGACCGGACAGCTCCAGGAG
ATGGAGATGATCCGTCAGAAGGTCTATCAACTGGAACAGGCGCAGATCAAGATCAAGCAAGACTATGAAGCTGAG
ATCCGAATGCTGCGACACGAACTTGAGTCCCGTGGCGTGCAATCTATCCCTTCCCACATCGGCGGACCCGCGGCG
GCTCATACAGCTCCTTCCCAGGCTCCCCCACCTGCCTTGGGCCACGGCCCCAGCAATCTGTTTGGCGGTATCATG
ACCAACCCACCAGGTAGTGGCCCCGGTCTTGCACCTTCCCTTCCCCAGGATCAGCAGCCTCCCCAGCATCCCCTT
CAACAGCCTGCTTCGGTCGCTCAGCCTGGCGCGCCGCAACCCCAGCAGAGCTCCTTTGGAGGATATCCGGCTGGC
GCTGCTGTGAACGGCTATGGGCCGCCTCCACCTCCTACTGCATCCCCAGGCCCTGGTAAGGGCCGTGGTCGCGTT
CCCCCAGGCCCCGGTACCCCCCAGCAAACGCACATCGCCTACCCGGATCCTCGTGCTTCCCCTCAGATCCCTCGC
CCGACTCCTCCGAACCCCCCTCTCGGCCGCACAGCCGAACGTCCAGGAAATATGCTGGCAAACTGGAACCCCGAT
GATTTGCCTCCGTCGCAGAAGCGTGAGGGTTCTGATTGGTATGCCGTGTTCAACCCCGAGGTCCAGCGTGTTCTC
GATGTGGAACTGGTACATCACTTGAACCACGACAGCGTCGTTTGCTGTGTGCGCTTTAGCCGTGACGGCAAATAC
TTGGCTACAGGCTGTAACCGCTCGGCTCAAATCTTCGACGTGACCACCGGTCAAAATGTGGCCACCTTGCAGGAT
GAAAACGTCGACAAGGACGGCGACTTATACATTCGCAGCGTTTGCTTCAGTCCGGATGGCAAATATCTTGCGACT
GGTGCTGAAGATAAGCAGATTCGGGTTTGGGATATCAACCAGCGCACCATCAAACATATCTTCAGTGGACACGAG
CAGGACATCTACTCTTTGGACTTTGCTGGCAACGGTCGATTCATCGCCTCTGGCAGTGGAGATAAGACCGTGCGC
CTTTGGGATATTCTCGACGGCAAGCTTGTCTACACCCTTAGCATTGAGGATGGTGTCACTACTGTGGCCATGTCT
CCGGATGGCCGTTACGTAGCCGCGGGCTCGTTGGACAAGAGCGTGCGCGTTTGGGACACTACAACTGGATACCTG
GTAGAACGCCTAGAGAGCCCAGATGGCCACAAGGACAGTGTTTACTCGGTCGCGTTTGCACCCAATGGCCGTGAC
CTTGTCAGTGGCAGTCTGGACAAGACTATCAAGCTCTGGGAGCTTACCGTTCCCCGGGGCATGCACCCTCACAGT
GCCGTCAAGGGCGGCAAGTGTATTCGTACATTCGAGGGCCACAAGGACTTTGTTCTCAGTGTGTGCCTGACACCC
GACGGTGCTTGGGTGATGAGTGGTTCCAAGGACCGTGGTGTTCAGTTCTGGGACCCAGTGACTGGAAATGCCCAA
ATGATGCTTCAAGGCCACAAGAACTCTGTCATCTCGGTTGCACCCAGTCCTACTGGCAACCTGTTCGCGACCGGC
AGTGGAGACATGCGTGCACGAATCTGGAGATACTCGGCGTATACTGGACGATGA
Gene >Pro_DTO377G3_2|g9010.t1
ATGTACAACGCTCATCGCGGGATGGTACCCGCTCCCAACTCCCGTCTGACGGAGTTGTTGGATCAACTGCGCCAG
GAGTTTGAGAGCCAGTCGCGAAACACCGGTGAATTCGAGCATCAGTGTATGTTATCTTCTCCTTTCCGACATATT
GTTTCCCCTCCCCTATGCTCGGGCTATTCGCGCCTTGAGCTCCTCCCCCCCCNNNNNNNNNNATAACCCTGGTTA
TTGTGTATCTGTTTTTTTTTTTATTTCCTTTTGTCTATTTTTTTTCCCACACCACTTTTGCGGGGTTTTTTCGAG
CTTTTCTGCCCCCCCCCCCCCCCCCCCTTGTCCAATCATTTCATACAAGCAGCTGCAGCTCATTTCCCCCAATGA
CTGCAGCTCCATGGTTTCCGACATTCGCTGAAGTGTTATCTAACTGACAGATCATGCAGTGACCGGACAGCTCCA
GGAGATGGAGATGATCCGTCAGAAGGTCTATCAACTGGAACAGGCGCAGATCAAGATCAAGCAAGAGTTCGTCCC
TCCTACCTTCTTGAAAGCTTGAATAACCCTTTCTGACATTACATTTTTCCTTTTTAGCTATGAAGCTGAGATCCG
AATGCTGCGACACGAACTTGAGTCCCGTGGCGTGCAATCTATCCCTTCCCACATCGGCGGACCCGCGGCGGCTCA
TACAGCTCCTTCCCAGGCTCCCCCACCTGCCTTGGGCCACGGCCCCAGCAATCTGTTTGGCGGTATCATGACCAA
CCCACCAGGTAGTGGCCCCGGTCTTGCACCTTCCCTTCCCCAGGATCAGCAGCCTCCCCAGCATCCCCTTCAACA
GCCTGCTTCGGTCGCTCAGCCTGGCGCGCCGCAACCCCAGCAGAGCTCCTTTGGAGGATATCCGGCTGGCGCTGC
TGTGAACGGTATGTCGTTGTGTTTATGAAAGTTGTCGCCCAGTTTGCTGACCTGTTGGATTGTTCATCTCCTAGG
CTATGGGCCGCCTCCACCTCCTACTGCATCCCCAGGCCCTGGTAAGGGCCGTGGTCGCGTTCCCCCAGGCCCCGG
TACCCCCCAGCAAACGCACATCGCCTACCCGGATCCTCGTGCTTCCCCTCAGATCCCTCGCCCGACTCCTCCGAA
CCCCCCTCTCGGCCGCACAGCCGAACGTCCAGGAAATATGCTGGCAAACTGGAACCCCGATGATTTGCCTCCGTC
GCAGAAGCGTGAGGGTTCTGATTGGTATGCCGTGTTCAACCCCGAGGTCCAGCGTGTTCTCGATGTGGAACTGGT
ACATCACTTGAACCACGACAGCGTCGTTTGCTGTGTGCGCTTTAGCCGTGACGGCAAATACTTGGCTACAGGCTG
TAACCGCTCGGCTCAAATCTTCGACGTGACCACCGGTCAAAATGTGGCCACCTTGCAGGATGAAAACGTCGACAA
GGACGGCGACTTATACATTCGCAGCGTTTGCTTCAGTCCGGATGGCAAATATCTTGCGACTGGTGCTGAAGATAA
GCAGATTCGGGTAAGTCTTGAGATTATATGGAACCAGCTATGTAGGAAGATTACTGACTGAATGCGATTGGCTCT
AGGTTTGGGATATCAACCAGCGCACCATCAAACATATCTTCAGTGGACACGAGCAGGACATCTACTCTTTGGACT
TTGCTGGCAACGGTCGATTCATCGCCTCTGGCAGTGGAGATAAGACCGTGCGCCTTTGGGATATTCTCGACGGCA
AGCTTGTCTACACCCTTAGCATTGAGGATGGTGTCACTACTGTGGCCATGTCTCCGGATGGCCGTTACGTAGCCG
CGGGCTCGTTGGACAAGAGCGTGCGCGTTTGGGACACTACAACTGGATACCTGGTAGAACGCCTAGAGAGCCCAG
ATGGCCACAAGGACAGTGTTTACTCGGTCGCGTTTGCACCCAATGGCCGTGACCTTGTCAGTGGCAGTCTGGACA
AGACTATCAAGCTCTGGGAGCTTACCGTTCCCCGGGGCATGCACCCTCACAGTGCCGTCAAGGGCGGCAAGTGTA
TTCGTACATTCGAGGGCCACAAGGTTAGATCTGAGATTACTTGAGCGAGATAGGCAGAAGCTAACCTTTTGACTA
CAATATAGGACTTTGTTCTCAGTGTGTGCCTGACACCCGACGGTGCTTGGGTGATGAGTGGTTCCAAGGACCGTG
GTGTTCAGTTCTGGGACCCAGTGACTGGAAATGCCCAAATGATGCTTCAAGGCCACAAGAACTCTGGTGAGTTTC
ATACAATCCTAGCTTGCATTATCATCTCTGACTCTCTAACTCCGAATAGTCATCTCGGTTGCACCCAGTCCTACT
GGCAACCTGTTCGCGACCGGCAGTGGAGACATGCGTGCACGAATCTGGAGGTGAGTTGTCCCGAGTGTGTTTCAG
GATCGTAAGCTGACTTGTTTTCTAGATACTCGGCGTATACTGGACGATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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