Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g9003.t1
Gene name
Locationscaffold_40:50642..51589
Strand+
Gene length (bp)947
Transcript length (bp)666
Coding sequence length (bp)666
Protein length (aa) 222

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08698 Fcf2 Fcf2 pre-rRNA processing 1.7E-37 99 192

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g9003.t1
MADSTFVSDVQEDLTDDQIQQLLLEAETRLKGLNAPSTQIDDLASLRIPKLSPGSSLESYIVQGDDVATVDAAKI
TDQKQKELANSLRTVEIKKANTDKPTAGPEWFNLPKTEMTPELKRDLQLIRMRSVLDPKRHYKKENGKAKPPEYS
QVGTIIEGPTEFFSNRITKKDRKKNFVDETLALERGTKRFESKYRDIQASKSSGKKSFYKDLKAKRTRKNK*
Coding >Pro_DTO377G3_2|g9003.t1
ATGGCTGACTCAACATTTGTGTCGGATGTTCAGGAAGACCTGACCGATGATCAGATTCAGCAGTTGCTTCTAGAG
GCAGAGACTCGACTAAAGGGCCTCAATGCGCCAAGCACCCAGATTGATGATCTGGCATCTCTTAGGATCCCGAAA
TTGTCACCTGGGTCCTCGCTGGAATCATATATTGTCCAGGGAGATGATGTTGCTACTGTCGATGCTGCAAAGATC
ACCGACCAAAAGCAGAAGGAGTTGGCTAATTCTCTTCGCACTGTTGAGATCAAGAAAGCGAACACCGACAAGCCT
ACTGCTGGACCTGAGTGGTTCAACCTCCCAAAGACAGAAATGACCCCAGAGCTTAAGAGAGATCTACAGCTCATT
CGGATGCGTTCTGTGCTTGATCCCAAGCGTCACTACAAGAAGGAAAATGGCAAGGCCAAACCACCAGAATATTCC
CAGGTCGGAACCATCATCGAGGGCCCTACAGAGTTCTTCAGCAACCGTATCACCAAGAAGGACCGCAAGAAGAAT
TTCGTTGATGAAACATTGGCACTCGAGCGTGGCACCAAGCGCTTTGAATCTAAATATAGGGACATTCAAGCCAGC
AAATCAAGTGGAAAGAAGTCCTTCTACAAGGACCTGAAGGCAAAGAGAACCCGGAAAAACAAGTGA
Transcript >Pro_DTO377G3_2|g9003.t1
ATGGCTGACTCAACATTTGTGTCGGATGTTCAGGAAGACCTGACCGATGATCAGATTCAGCAGTTGCTTCTAGAG
GCAGAGACTCGACTAAAGGGCCTCAATGCGCCAAGCACCCAGATTGATGATCTGGCATCTCTTAGGATCCCGAAA
TTGTCACCTGGGTCCTCGCTGGAATCATATATTGTCCAGGGAGATGATGTTGCTACTGTCGATGCTGCAAAGATC
ACCGACCAAAAGCAGAAGGAGTTGGCTAATTCTCTTCGCACTGTTGAGATCAAGAAAGCGAACACCGACAAGCCT
ACTGCTGGACCTGAGTGGTTCAACCTCCCAAAGACAGAAATGACCCCAGAGCTTAAGAGAGATCTACAGCTCATT
CGGATGCGTTCTGTGCTTGATCCCAAGCGTCACTACAAGAAGGAAAATGGCAAGGCCAAACCACCAGAATATTCC
CAGGTCGGAACCATCATCGAGGGCCCTACAGAGTTCTTCAGCAACCGTATCACCAAGAAGGACCGCAAGAAGAAT
TTCGTTGATGAAACATTGGCACTCGAGCGTGGCACCAAGCGCTTTGAATCTAAATATAGGGACATTCAAGCCAGC
AAATCAAGTGGAAAGAAGTCCTTCTACAAGGACCTGAAGGCAAAGAGAACCCGGAAAAACAAGTGA
Gene >Pro_DTO377G3_2|g9003.t1
ATGGCTGACTCAACATTTGTGTCGGATGTTCAGGAAGACCTGACCGATGATCAGATTCAGCAGTTGCTTCTAGAG
GCAGAGACTCGACTAAAGGGCCTCAATGCGCCAAGCACCCAGATTGATGATCTGGCATCTCTTAGGTATGGAAAC
ATGTTGAAGATCAATGTGCTAGGATCTAGGCTTACCTCCTCCTAGGATCCCGAAATTGTCACCTGGGTCCTCGCT
GGAATCATATATTGTCCAGGGAGATGATGTTGCTACTGTCGATGCTGCAAAGATCACCGACCAAAAGCAGAAGGA
GTTGGCTAATTCTCTTCGCACTGTTGAGATCAAGAAAGCGAACACCGTGAGTCAATCTCGTCCTTGCTTACTCTC
CTTTCCTTTTTTTTTTTTGCTATGAGGAAAATATTCCCAACGCGAAGCGCTTGATGCAGCGTAACCAGTCCGTCT
TGGGCTGTGCTGCACCAATGAGAGCCTTTTATTCATAGTTACTCTGAGCATTCATCACAATTACTATATTTTCTC
GGTGTGCGACATTTGTAGCTATTTGCTAACAACCCTCACCTTGATAGGACAAGCCTACTGCTGGACCTGAGTGGT
TCAACCTCCCAAAGACAGAAATGACCCCAGAGCTTAAGAGAGATCTACAGCTCATTCGGATGCGTTCTGTGCTTG
ATCCCAAGCGTCACTACAAGAAGGAAAATGGCAAGGCCAAACCACCAGAATATTCCCAGGTCGGAACCATCATCG
AGGGCCCTACAGAGTTCTTCAGCAACCGTATCACCAAGAAGGACCGCAAGAAGAATTTCGTTGATGAAACATTGG
CACTCGAGCGTGGCACCAAGCGCTTTGAATCTAAATATAGGGACATTCAAGCCAGCAAATCAAGTGGAAAGAAGT
CCTTCTACAAGGACCTGAAGGCAAAGAGAACCCGGAAAAACAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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