Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8994.t1
Gene name
Locationscaffold_40:30777..32304
Strand+
Gene length (bp)1527
Transcript length (bp)993
Coding sequence length (bp)993
Protein length (aa) 331

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain 1.5E-45 3 146
PF02866 Ldh_1_C lactate/malate dehydrogenase, alpha/beta C-terminal domain 3.9E-44 148 323
PF01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 5.8E-05 5 108

GO

GO Term Description Terminal node
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity Yes
GO:0055114 oxidation-reduction process Yes
GO:0006694 steroid biosynthetic process Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0016491 oxidoreductase activity Yes
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0008202 steroid metabolic process No
GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor No
GO:0044238 primary metabolic process No
GO:0009058 biosynthetic process No
GO:0003824 catalytic activity No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0003674 molecular_function No
GO:0016229 steroid dehydrogenase activity No
GO:1901576 organic substance biosynthetic process No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0008610 lipid biosynthetic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0006629 lipid metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8994.t1
MVKAVVLGAAGGIGQPLSLLLKASPLVDDLALYDVVNTPGVAADLSHISSVAKITGYLPKDDGLKLALTGADVVV
IPAGIPRKPGMTRDDLFKVNAGIVKGLVESIAEFAPKAFILVISNPVNSTVPIAAEVLKAAGVFDPKRLFGVTTL
DVVRAETFTQEFSGVKNASDATVPVIGGHSGETIVPLFSKVSPSFQIPADRYDALVTRVQFGGDEVVKAKDGAGS
ATLSMAFAGFRFAEAIIKASKGEKGIVEPTFVYLPGVAGGDEIAKATGLDFFSTPVELGPNGAEKAINILDGVTE
QEKKLLEACIKGLQGNIEKGIEFAKNSPPK*
Coding >Pro_DTO377G3_2|g8994.t1
ATGGTCAAGGCTGTTGTTCTCGGAGCTGCTGGTGGCATTGGCCAGCCTCTCTCCCTCTTGCTGAAGGCTTCCCCT
CTCGTGGATGACCTGGCCCTCTATGACGTTGTCAACACCCCCGGTGTGGCTGCCGATCTCTCTCACATCTCCTCG
GTCGCCAAAATCACTGGCTACCTCCCCAAGGATGATGGATTGAAGCTTGCTCTGACCGGTGCTGACGTCGTTGTC
ATCCCCGCCGGCATTCCCCGCAAACCTGGTATGACCCGTGATGATCTTTTCAAGGTCAATGCCGGAATTGTGAAG
GGCCTCGTCGAGAGTATCGCCGAGTTTGCCCCCAAGGCTTTCATCCTCGTTATCTCCAACCCTGTGAACTCCACA
GTCCCCATCGCCGCCGAGGTCCTCAAGGCTGCCGGTGTCTTCGACCCCAAGCGTCTGTTCGGTGTGACCACCCTG
GACGTTGTCCGCGCCGAGACCTTCACTCAGGAGTTCTCCGGCGTGAAGAATGCCTCTGATGCCACCGTTCCCGTT
ATTGGTGGCCACTCTGGCGAGACCATTGTTCCTCTGTTCAGCAAGGTTTCCCCCAGCTTCCAGATCCCTGCTGAC
CGATACGATGCTCTTGTTACCCGTGTCCAATTCGGAGGTGACGAGGTCGTCAAGGCCAAGGATGGTGCTGGTTCC
GCTACTCTGTCTATGGCCTTTGCCGGTTTCAGATTCGCCGAGGCTATCATCAAGGCTTCCAAGGGCGAGAAGGGC
ATTGTTGAGCCTACTTTCGTCTACCTGCCCGGTGTTGCTGGCGGTGATGAGATTGCCAAGGCCACCGGTCTTGAC
TTCTTCTCCACTCCCGTGGAACTCGGTCCCAACGGTGCCGAGAAGGCCATTAACATCCTTGACGGCGTGACTGAG
CAGGAGAAGAAGCTCCTCGAGGCTTGCATCAAGGGACTCCAGGGCAACATCGAGAAGGGCATTGAGTTCGCTAAG
AACTCCCCACCAAAATAG
Transcript >Pro_DTO377G3_2|g8994.t1
ATGGTCAAGGCTGTTGTTCTCGGAGCTGCTGGTGGCATTGGCCAGCCTCTCTCCCTCTTGCTGAAGGCTTCCCCT
CTCGTGGATGACCTGGCCCTCTATGACGTTGTCAACACCCCCGGTGTGGCTGCCGATCTCTCTCACATCTCCTCG
GTCGCCAAAATCACTGGCTACCTCCCCAAGGATGATGGATTGAAGCTTGCTCTGACCGGTGCTGACGTCGTTGTC
ATCCCCGCCGGCATTCCCCGCAAACCTGGTATGACCCGTGATGATCTTTTCAAGGTCAATGCCGGAATTGTGAAG
GGCCTCGTCGAGAGTATCGCCGAGTTTGCCCCCAAGGCTTTCATCCTCGTTATCTCCAACCCTGTGAACTCCACA
GTCCCCATCGCCGCCGAGGTCCTCAAGGCTGCCGGTGTCTTCGACCCCAAGCGTCTGTTCGGTGTGACCACCCTG
GACGTTGTCCGCGCCGAGACCTTCACTCAGGAGTTCTCCGGCGTGAAGAATGCCTCTGATGCCACCGTTCCCGTT
ATTGGTGGCCACTCTGGCGAGACCATTGTTCCTCTGTTCAGCAAGGTTTCCCCCAGCTTCCAGATCCCTGCTGAC
CGATACGATGCTCTTGTTACCCGTGTCCAATTCGGAGGTGACGAGGTCGTCAAGGCCAAGGATGGTGCTGGTTCC
GCTACTCTGTCTATGGCCTTTGCCGGTTTCAGATTCGCCGAGGCTATCATCAAGGCTTCCAAGGGCGAGAAGGGC
ATTGTTGAGCCTACTTTCGTCTACCTGCCCGGTGTTGCTGGCGGTGATGAGATTGCCAAGGCCACCGGTCTTGAC
TTCTTCTCCACTCCCGTGGAACTCGGTCCCAACGGTGCCGAGAAGGCCATTAACATCCTTGACGGCGTGACTGAG
CAGGAGAAGAAGCTCCTCGAGGCTTGCATCAAGGGACTCCAGGGCAACATCGAGAAGGGCATTGAGTTCGCTAAG
AACTCCCCACCAAAATAG
Gene >Pro_DTO377G3_2|g8994.t1
ATGGTCAAGGCTGGTATGTTATTCGGCCGTTTTGTCTATCATTTGCTGATTCGTTATTAGTTGTTCTCGGAGCTG
CTGGTGGCATTGGCCAGGTATGTCCCCCCACCTCATTTATCCTTCCTAGGGTTTCTTATGAACCTCAGCTAATCG
ACCCTCTAGCCTCTCTCCCTCTTGCTGAAGGCTTCCCCTCTCGTGGATGACCTGGCCCTCTATGACGTTGTCAAC
ACCCCCGGTGTGGCTGCCGATCTCTCTCACATCTCCTCGGTCGCCGTACGTATATGTATACTCCTGAAGCATCAT
AATAAACCCGTTAACAATTTGACTAGAAAATCACTGGCTACCTCCCCAAGGATGATGGATTGAAGCTTGCTCTGA
CCGGTGCTGACGTCGTTGTCATCCCCGCCGGCATTCCCCGTTAGTAGATTATCCACAGATCGGGATGTGGTGTTT
TTGCTAACGTATATGGTAACATCTAGGCAAACCTGGTATGACCCGTGATGATCTTTTCAAGGTCAATGCCGGAAT
TGTGAAGGGCCTCGTCGAGAGTATCGCCGAGTTTGCCCCCAAGGCTTTCATCCTCGTTATCTCCAACCCTGTGAA
CTCCACAGTCCCCATCGCCGCCGAGGTCCTCAAGGCTGCCGGTGTCTTCGACCCCAAGCGTCTGTTCGGTGTGAC
CACCCTGGACGTTGTCCGCGCCGAGACCTTCACTCAGGAGTTCTCCGGCGTGAAGAATGCCTCTGATGCCACCGT
TCCCGTTATTGGTGGCCACTCTGGCGAGACCATTGTTCCTCTGTTCAGCAAGGTTTCCCCCAGCTTCCAGATCCC
TGCTGACCGATACGATGCTCTTGTTACCCGTATGTGAACAGCCCTTTCCGTGGGAGGCGTTTACTGATATTTCAC
AGGTGTCCAATTCGGAGGTGACGAGGTCGTCAAGGCCAAGGATGGTGCTGGTTCCGCTACTCTGTCTATGGCCTT
TGCCGGTTTCAGGTATGTTTCACCTGCTAACCCGGAGCTACCACGGTGACTGACAAATATTAGATTCGCCGAGGC
TATCATCAAGGCTTCCAAGGGCGAGAAGGGCATTGTTGAGCCTACTTTCGTCTACCTGCCCGGTGTTGCTGGCGG
TGATGAGATTGCCAAGGCCACCGGTCTTGACTTCTTCTCCACTCCCGTGGAACTCGGTGTAAGTCTTCAATTTTC
CAATGTGTTAAAACAACTAACTGACAATGCTCGATCTAGCCCAACGGTGCCGAGAAGGCCATTAACATCCTTGAC
GGCGTGACTGAGCAGGAGAAGAAGCTCCTCGAGGCTTGCATCAAGGGACTCCAGGGCAACATCGAGAAGGGCATT
GAGTTCGCTAAGAACTCCCCACCAAAGTAAGACCTCCCTCCCCCCAATGTCCGTTGTGCACCATGTATATCGGGT
GGGCCTCTTTGTGTCGATATATTTCTCGCTAGTTTCTCCACGGGTGCGATGACACTAGAAAATGGCAGAGCGTTG
CTAATCAATCTTCTCCCGGAAAGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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