Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g8988.t1
Gene name
Location	scaffold_39:182623..183592
Strand	-
Gene length (bp)	969
Transcript length (bp)	969
Coding sequence length (bp)	969
Protein length (aa)	323

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00704	Glyco_hydro_18	Glycosyl hydrolases family 18	1.6E-12	33	225

GO

GO Term	Description	Terminal node
GO:0005975	carbohydrate metabolic process	Yes
GO:0008150	biological_process	No
GO:0044238	primary metabolic process	No
GO:0008152	metabolic process	No
GO:0071704	organic substance metabolic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g8988.t1 MPPIRGGLGERPRVILYHQTLIPGGGQYVSMLPLLENNTGITHVILAAFHLNAAPGDITLNDDPPDNPKFDPLWA EVPVVQRQGVKVMGMLGGAAPGTFTRLDGSRMEFEEFYYPFLTMIRRHGLDGIDLDVEEAMSLQGIVRLIDRLKA DLGDAFIITLAPVAVALLGIGNLSGFDYRELEQARASQISWYNTQFYNGWGLAEDPRMYATMVAQGWSPRRIVYG LLTNPGNGSQGYVSQERMGPVLAMLIEQFPNFGGVMGWEYYNALPGGMAEPWQWAAEMTLTMGMKDLVVAARQLM SAGPMASSLNALFQDMLDQGRQ*
Coding	>Pro_DTO377G3_2\|g8988.t1 ATGCCACCGATCCGAGGTGGACTCGGCGAGCGTCCGCGGGTGATCTTGTACCACCAAACACTCATCCCAGGCGGG GGTCAGTATGTCTCCATGCTCCCGCTCCTCGAAAACAACACCGGAATAACACATGTTATTCTCGCCGCTTTTCAC TTGAACGCTGCACCAGGGGACATCACTCTCAACGATGATCCACCAGACAACCCCAAATTCGACCCCCTATGGGCC GAAGTGCCAGTCGTGCAGCGGCAAGGCGTGAAAGTGATGGGCATGTTAGGCGGGGCCGCCCCGGGCACCTTCACG CGGCTTGACGGCAGCCGGATGGAATTTGAAGAATTTTATTATCCTTTCCTGACCATGATTCGCCGCCATGGCCTT GATGGAATTGATCTCGATGTGGAAGAGGCCATGTCTTTGCAAGGCATCGTCCGACTCATCGACCGGCTCAAGGCT GACCTGGGCGACGCATTCATCATTACCCTGGCCCCTGTGGCAGTTGCATTACTTGGTATTGGGAACTTATCAGGG TTCGACTACCGTGAACTCGAGCAGGCTCGTGCTTCTCAGATCAGCTGGTACAATACCCAGTTCTACAATGGCTGG GGTCTTGCTGAGGATCCACGGATGTACGCTACTATGGTTGCCCAGGGGTGGTCTCCGCGACGGATTGTATACGGC CTGTTGACAAACCCGGGTAATGGATCGCAGGGTTATGTGTCTCAGGAGAGGATGGGACCTGTTCTGGCAATGTTG ATTGAGCAGTTTCCCAACTTTGGTGGCGTTATGGGTTGGGAGTATTACAATGCTCTGCCTGGGGGCATGGCGGAA CCGTGGCAGTGGGCTGCGGAGATGACATTGACCATGGGTATGAAAGATCTTGTCGTGGCAGCTCGCCAGTTAATG TCGGCAGGGCCGATGGCGAGCAGTCTCAATGCTTTGTTCCAAGATATGCTAGATCAGGGACGCCAATGA
Transcript	>Pro_DTO377G3_2\|g8988.t1 ATGCCACCGATCCGAGGTGGACTCGGCGAGCGTCCGCGGGTGATCTTGTACCACCAAACACTCATCCCAGGCGGG GGTCAGTATGTCTCCATGCTCCCGCTCCTCGAAAACAACACCGGAATAACACATGTTATTCTCGCCGCTTTTCAC TTGAACGCTGCACCAGGGGACATCACTCTCAACGATGATCCACCAGACAACCCCAAATTCGACCCCCTATGGGCC GAAGTGCCAGTCGTGCAGCGGCAAGGCGTGAAAGTGATGGGCATGTTAGGCGGGGCCGCCCCGGGCACCTTCACG CGGCTTGACGGCAGCCGGATGGAATTTGAAGAATTTTATTATCCTTTCCTGACCATGATTCGCCGCCATGGCCTT GATGGAATTGATCTCGATGTGGAAGAGGCCATGTCTTTGCAAGGCATCGTCCGACTCATCGACCGGCTCAAGGCT GACCTGGGCGACGCATTCATCATTACCCTGGCCCCTGTGGCAGTTGCATTACTTGGTATTGGGAACTTATCAGGG TTCGACTACCGTGAACTCGAGCAGGCTCGTGCTTCTCAGATCAGCTGGTACAATACCCAGTTCTACAATGGCTGG GGTCTTGCTGAGGATCCACGGATGTACGCTACTATGGTTGCCCAGGGGTGGTCTCCGCGACGGATTGTATACGGC CTGTTGACAAACCCGGGTAATGGATCGCAGGGTTATGTGTCTCAGGAGAGGATGGGACCTGTTCTGGCAATGTTG ATTGAGCAGTTTCCCAACTTTGGTGGCGTTATGGGTTGGGAGTATTACAATGCTCTGCCTGGGGGCATGGCGGAA CCGTGGCAGTGGGCTGCGGAGATGACATTGACCATGGGTATGAAAGATCTTGTCGTGGCAGCTCGCCAGTTAATG TCGGCAGGGCCGATGGCGAGCAGTCTCAATGCTTTGTTCCAAGATATGCTAGATCAGGGACGCCAATGA
Gene	>Pro_DTO377G3_2\|g8988.t1 ATGCCACCGATCCGAGGTGGACTCGGCGAGCGTCCGCGGGTGATCTTGTACCACCAAACACTCATCCCAGGCGGG GGTCAGTATGTCTCCATGCTCCCGCTCCTCGAAAACAACACCGGAATAACACATGTTATTCTCGCCGCTTTTCAC TTGAACGCTGCACCAGGGGACATCACTCTCAACGATGATCCACCAGACAACCCCAAATTCGACCCCCTATGGGCC GAAGTGCCAGTCGTGCAGCGGCAAGGCGTGAAAGTGATGGGCATGTTAGGCGGGGCCGCCCCGGGCACCTTCACG CGGCTTGACGGCAGCCGGATGGAATTTGAAGAATTTTATTATCCTTTCCTGACCATGATTCGCCGCCATGGCCTT GATGGAATTGATCTCGATGTGGAAGAGGCCATGTCTTTGCAAGGCATCGTCCGACTCATCGACCGGCTCAAGGCT GACCTGGGCGACGCATTCATCATTACCCTGGCCCCTGTGGCAGTTGCATTACTTGGTATTGGGAACTTATCAGGG TTCGACTACCGTGAACTCGAGCAGGCTCGTGCTTCTCAGATCAGCTGGTACAATACCCAGTTCTACAATGGCTGG GGTCTTGCTGAGGATCCACGGATGTACGCTACTATGGTTGCCCAGGGGTGGTCTCCGCGACGGATTGTATACGGC CTGTTGACAAACCCGGGTAATGGATCGCAGGGTTATGTGTCTCAGGAGAGGATGGGACCTGTTCTGGCAATGTTG ATTGAGCAGTTTCCCAACTTTGGTGGCGTTATGGGTTGGGAGTATTACAATGCTCTGCCTGGGGGCATGGCGGAA CCGTGGCAGTGGGCTGCGGAGATGACATTGACCATGGGTATGAAAGATCTTGTCGTGGCAGCTCGCCAGTTAATG TCGGCAGGGCCGATGGCGAGCAGTCTCAATGCTTTGTTCCAAGATATGCTAGATCAGGGACGCCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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