Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g898.t1
Gene name
Locationscaffold_01:2393808..2394626
Strand-
Gene length (bp)818
Transcript length (bp)762
Coding sequence length (bp)762
Protein length (aa) 254

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00025 Arf ADP-ribosylation factor family 8.3E-26 13 108
PF00025 Arf ADP-ribosylation factor family 5.4E-11 152 239
PF08477 Roc Ras of Complex, Roc, domain of DAPkinase 8.4E-10 20 107
PF01926 MMR_HSR1 50S ribosome-binding GTPase 5.7E-06 20 115
PF04670 Gtr1_RagA Gtr1/RagA G protein conserved region 3.2E-06 20 119
PF09439 SRPRB Signal recognition particle receptor beta subunit 9.5E-05 17 106

GO

GO Term Description Terminal node
GO:0005525 GTP binding Yes
GO:0097367 carbohydrate derivative binding No
GO:0032549 ribonucleoside binding No
GO:1901363 heterocyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:0097159 organic cyclic compound binding No
GO:0032553 ribonucleotide binding No
GO:0001883 purine nucleoside binding No
GO:0043168 anion binding No
GO:0001882 nucleoside binding No
GO:1901265 nucleoside phosphate binding No
GO:0017076 purine nucleotide binding No
GO:0036094 small molecule binding No
GO:0032561 guanyl ribonucleotide binding No
GO:0032550 purine ribonucleoside binding No
GO:0000166 nucleotide binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0019001 guanyl nucleotide binding No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g898.t1
MYHLAKSLYLAATSKEEYSVILLGLDNAGKTTLLSQIKALYQPRSDGAPVPNPGKTVPTVGQNVATIALPDMNLK
IWDVGGQISMRGLWQSYYTSCHAIIFVVDSSDVGQDPDIARLTRRASSVAGPARNGTRGSASAEAFSEQNVGINA
ASSEFGRLDECRQVLESVLQNADVAGVPILVLANKQDREDCVEVVRIKEGLVRKVFEGETGSGVRDSRVLPVSAL
LGSGVQAAVEWVQSRVKWNKEGRPPVMR*
Coding >Pro_DTO377G3_2|g898.t1
ATGTATCACCTGGCCAAGTCGCTGTACTTAGCCGCCACGAGCAAAGAAGAGTATTCTGTCATTCTGCTTGGACTG
GATAATGCCGGCAAAACAACACTCCTCTCCCAGATCAAAGCACTGTACCAACCCCGCTCCGATGGCGCCCCAGTA
CCCAACCCCGGAAAAACCGTCCCGACTGTCGGGCAGAATGTCGCAACGATAGCGTTACCGGACATGAATTTAAAG
ATTTGGGATGTTGGAGGTCAGATCTCTATGCGCGGTCTGTGGCAGAGCTACTATACTAGCTGCCACGCGATCATC
TTCGTGGTCGATAGTTCCGACGTTGGTCAAGATCCCGATATCGCGCGACTTACTCGGCGCGCAAGCTCCGTGGCA
GGTCCTGCACGCAATGGCACACGAGGGAGCGCAAGTGCCGAGGCCTTCTCGGAGCAAAATGTCGGAATCAACGCG
GCCAGCAGTGAGTTCGGGCGATTAGACGAATGTCGCCAAGTCCTCGAGTCAGTCTTACAAAATGCGGATGTGGCT
GGTGTTCCTATCTTGGTGTTGGCAAATAAGCAGGACCGTGAGGACTGCGTGGAGGTGGTTCGCATTAAAGAAGGG
CTTGTCCGGAAGGTGTTTGAGGGAGAAACAGGAAGTGGCGTCCGTGACAGTCGTGTGCTGCCGGTCAGCGCGCTA
CTTGGATCTGGTGTCCAGGCGGCTGTGGAGTGGGTACAAAGCCGCGTCAAGTGGAATAAAGAGGGCAGGCCTCCG
GTGATGCGTTGA
Transcript >Pro_DTO377G3_2|g898.t1
ATGTATCACCTGGCCAAGTCGCTGTACTTAGCCGCCACGAGCAAAGAAGAGTATTCTGTCATTCTGCTTGGACTG
GATAATGCCGGCAAAACAACACTCCTCTCCCAGATCAAAGCACTGTACCAACCCCGCTCCGATGGCGCCCCAGTA
CCCAACCCCGGAAAAACCGTCCCGACTGTCGGGCAGAATGTCGCAACGATAGCGTTACCGGACATGAATTTAAAG
ATTTGGGATGTTGGAGGTCAGATCTCTATGCGCGGTCTGTGGCAGAGCTACTATACTAGCTGCCACGCGATCATC
TTCGTGGTCGATAGTTCCGACGTTGGTCAAGATCCCGATATCGCGCGACTTACTCGGCGCGCAAGCTCCGTGGCA
GGTCCTGCACGCAATGGCACACGAGGGAGCGCAAGTGCCGAGGCCTTCTCGGAGCAAAATGTCGGAATCAACGCG
GCCAGCAGTGAGTTCGGGCGATTAGACGAATGTCGCCAAGTCCTCGAGTCAGTCTTACAAAATGCGGATGTGGCT
GGTGTTCCTATCTTGGTGTTGGCAAATAAGCAGGACCGTGAGGACTGCGTGGAGGTGGTTCGCATTAAAGAAGGG
CTTGTCCGGAAGGTGTTTGAGGGAGAAACAGGAAGTGGCGTCCGTGACAGTCGTGTGCTGCCGGTCAGCGCGCTA
CTTGGATCTGGTGTCCAGGCGGCTGTGGAGTGGGTACAAAGCCGCGTCAAGTGGAATAAAGAGGGCAGGCCTCCG
GTGATGCGTTGA
Gene >Pro_DTO377G3_2|g898.t1
ATGTATCACCTGGCCAAGTCGCTGTACTTAGCCGCCACGAGCAAAGAAGGTAACTGCTCTCTCCTATCGCATGAC
CTTCTACGCTGATTATCCTAACCTACTTAGAGTATTCTGTCATTCTGCTTGGACTGGATAATGCCGGCAAAACAA
CACTCCTCTCCCAGATCAAAGCACTGTACCAACCCCGCTCCGATGGCGCCCCAGTACCCAACCCCGGAAAAACCG
TCCCGACTGTCGGGCAGAATGTCGCAACGATAGCGTTACCGGACATGAATTTAAAGATTTGGGATGTTGGAGGTC
AGATCTCTATGCGCGGTCTGTGGCAGAGCTACTATACTAGCTGCCACGCGATCATCTTCGTGGTCGATAGTTCCG
ACGTTGGTCAAGATCCCGATATCGCGCGACTTACTCGGCGCGCAAGCTCCGTGGCAGGTCCTGCACGCAATGGCA
CACGAGGGAGCGCAAGTGCCGAGGCCTTCTCGGAGCAAAATGTCGGAATCAACGCGGCCAGCAGTGAGTTCGGGC
GATTAGACGAATGTCGCCAAGTCCTCGAGTCAGTCTTACAAAATGCGGATGTGGCTGGTGTTCCTATCTTGGTGT
TGGCAAATAAGCAGGACCGTGAGGACTGCGTGGAGGTGGTTCGCATTAAAGAAGGGCTTGTCCGGAAGGTGTTTG
AGGGAGAAACAGGAAGTGGCGTCCGTGACAGTCGTGTGCTGCCGGTCAGCGCGCTACTTGGATCTGGTGTCCAGG
CGGCTGTGGAGTGGGTACAAAGCCGCGTCAAGTGGAATAAAGAGGGCAGGCCTCCGGTGATGCGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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