Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8964.t1
Gene name
Locationscaffold_39:119204..120818
Strand-
Gene length (bp)1614
Transcript length (bp)1494
Coding sequence length (bp)1494
Protein length (aa) 498

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06870 RNA_pol_I_A49 A49-like RNA polymerase I associated factor 4.9E-61 84 489

GO

GO Term Description Terminal node
GO:0006351 transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0006725 cellular aromatic compound metabolic process No
GO:0005488 binding No
GO:0008152 metabolic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0003676 nucleic acid binding No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0008150 biological_process No
GO:0009058 biosynthetic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0032774 RNA biosynthetic process No
GO:0016070 RNA metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0043170 macromolecule metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0044238 primary metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0003674 molecular_function No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0097159 organic cyclic compound binding No
GO:0018130 heterocycle biosynthetic process No
GO:0097659 nucleic acid-templated transcription No
GO:1901363 heterocyclic compound binding No
GO:0090304 nucleic acid metabolic process No
GO:0044237 cellular metabolic process No
GO:0009987 cellular process No
GO:0009059 macromolecule biosynthetic process No
GO:1901576 organic substance biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8964.t1
MPSNKTDHKRKRSSGNDRPSKKPALQQLPPLAASVVEDKSELAPVIVDTPGLQSSKSLHWNPYIKNRANVSKSAA
STRNPGIVSSEILLQSSDHPKLDFVGREGTGDDTDSQVKHYVAVIDPERKTWKVVEVRRATLRGAVRSRKPEDDS
DEEMNTMRAQRTALTNTFGTKQSRKAVQSMAENAQLSNAPTGAVPQAGAALISSLPANTASGLAKALAMQAEVQA
AKPLPTPNLAVSHPSDVYTIETLVPGSHSTLSQLNGVDEWKSQVEAGLGVTTVSRYVSNRVGAVVNSENITHLQV
LRFIQLLIEFGRCLKNAGANAKGGGPGSKRLPPREDLRRILSNTTGSVTKPKPGAAAPDAASADLLPESVIDAVR
RRFAPSGGYVSKNDFTLLQTTICALSLHIPPQPARDGGSSSLGGNAPNELATDPSDLRDDLRLDPNTIHQYFREL
GCRIDKPRETEFAKWNIKGGRAEAHARRVARLRVPVEFPKVSRGGRR*
Coding >Pro_DTO377G3_2|g8964.t1
ATGCCGTCCAATAAAACAGATCACAAGCGGAAGCGTTCATCAGGCAATGATCGCCCAAGCAAAAAGCCCGCGCTG
CAGCAGCTGCCCCCGCTGGCCGCCAGCGTTGTTGAAGATAAGAGCGAGCTGGCACCGGTAATTGTCGACACACCT
GGTCTTCAAAGCTCGAAATCCCTCCACTGGAATCCATATATCAAAAACCGCGCCAATGTCTCCAAGTCTGCGGCA
TCGACTCGGAACCCGGGCATTGTCTCTTCAGAGATACTGCTCCAGTCCTCAGACCACCCTAAGTTGGACTTTGTC
GGCCGTGAGGGCACAGGAGATGATACCGACTCCCAAGTGAAGCACTATGTCGCAGTTATAGACCCAGAGCGCAAG
ACATGGAAAGTCGTGGAGGTGCGGCGAGCGACACTGCGAGGAGCAGTGAGAAGCCGCAAGCCCGAGGACGACTCA
GATGAAGAGATGAACACTATGCGCGCCCAACGCACAGCTCTAACAAACACCTTCGGAACCAAACAATCCCGCAAG
GCCGTGCAATCCATGGCCGAGAACGCCCAGCTCTCCAACGCCCCCACCGGCGCCGTCCCCCAAGCCGGCGCAGCC
CTCATCTCCTCGCTGCCCGCAAACACAGCCTCCGGCCTCGCCAAGGCCCTCGCCATGCAAGCCGAAGTGCAAGCC
GCCAAGCCCCTCCCAACCCCGAACCTAGCCGTCTCGCACCCCTCCGACGTCTACACAATTGAGACACTCGTTCCA
GGCAGCCACTCAACCCTCAGCCAACTAAACGGCGTAGACGAGTGGAAGTCACAAGTGGAAGCCGGTCTTGGCGTG
ACAACCGTCTCACGCTACGTCTCGAACCGCGTCGGTGCAGTCGTCAACTCCGAAAACATAACTCACCTCCAAGTC
CTCCGCTTCATCCAGCTGCTAATCGAGTTCGGACGCTGTCTCAAAAACGCAGGCGCGAACGCCAAGGGCGGCGGC
CCAGGCAGCAAGCGTCTCCCGCCCCGCGAAGACCTCCGCCGCATCCTGTCAAACACCACGGGGTCCGTCACGAAG
CCCAAGCCCGGCGCCGCTGCACCGGACGCCGCTTCCGCAGACCTGCTTCCGGAGTCCGTGATCGATGCCGTGCGT
CGCCGCTTCGCGCCCAGCGGCGGCTACGTCTCCAAGAACGACTTCACCCTCCTGCAAACTACCATCTGTGCGCTC
TCGCTGCATATCCCGCCCCAGCCGGCACGCGACGGTGGCTCCAGCTCACTCGGTGGTAATGCGCCCAACGAGCTT
GCGACTGATCCTTCGGATCTGCGTGATGATCTGCGTCTCGATCCGAATACTATTCACCAGTACTTCCGTGAACTC
GGTTGTCGCATTGATAAGCCGCGTGAGACGGAGTTCGCCAAGTGGAATATTAAGGGTGGACGTGCGGAGGCGCAT
GCGCGTCGTGTTGCTCGCTTGCGCGTGCCTGTTGAGTTCCCTAAGGTTAGCCGTGGTGGTCGGAGGTAG
Transcript >Pro_DTO377G3_2|g8964.t1
ATGCCGTCCAATAAAACAGATCACAAGCGGAAGCGTTCATCAGGCAATGATCGCCCAAGCAAAAAGCCCGCGCTG
CAGCAGCTGCCCCCGCTGGCCGCCAGCGTTGTTGAAGATAAGAGCGAGCTGGCACCGGTAATTGTCGACACACCT
GGTCTTCAAAGCTCGAAATCCCTCCACTGGAATCCATATATCAAAAACCGCGCCAATGTCTCCAAGTCTGCGGCA
TCGACTCGGAACCCGGGCATTGTCTCTTCAGAGATACTGCTCCAGTCCTCAGACCACCCTAAGTTGGACTTTGTC
GGCCGTGAGGGCACAGGAGATGATACCGACTCCCAAGTGAAGCACTATGTCGCAGTTATAGACCCAGAGCGCAAG
ACATGGAAAGTCGTGGAGGTGCGGCGAGCGACACTGCGAGGAGCAGTGAGAAGCCGCAAGCCCGAGGACGACTCA
GATGAAGAGATGAACACTATGCGCGCCCAACGCACAGCTCTAACAAACACCTTCGGAACCAAACAATCCCGCAAG
GCCGTGCAATCCATGGCCGAGAACGCCCAGCTCTCCAACGCCCCCACCGGCGCCGTCCCCCAAGCCGGCGCAGCC
CTCATCTCCTCGCTGCCCGCAAACACAGCCTCCGGCCTCGCCAAGGCCCTCGCCATGCAAGCCGAAGTGCAAGCC
GCCAAGCCCCTCCCAACCCCGAACCTAGCCGTCTCGCACCCCTCCGACGTCTACACAATTGAGACACTCGTTCCA
GGCAGCCACTCAACCCTCAGCCAACTAAACGGCGTAGACGAGTGGAAGTCACAAGTGGAAGCCGGTCTTGGCGTG
ACAACCGTCTCACGCTACGTCTCGAACCGCGTCGGTGCAGTCGTCAACTCCGAAAACATAACTCACCTCCAAGTC
CTCCGCTTCATCCAGCTGCTAATCGAGTTCGGACGCTGTCTCAAAAACGCAGGCGCGAACGCCAAGGGCGGCGGC
CCAGGCAGCAAGCGTCTCCCGCCCCGCGAAGACCTCCGCCGCATCCTGTCAAACACCACGGGGTCCGTCACGAAG
CCCAAGCCCGGCGCCGCTGCACCGGACGCCGCTTCCGCAGACCTGCTTCCGGAGTCCGTGATCGATGCCGTGCGT
CGCCGCTTCGCGCCCAGCGGCGGCTACGTCTCCAAGAACGACTTCACCCTCCTGCAAACTACCATCTGTGCGCTC
TCGCTGCATATCCCGCCCCAGCCGGCACGCGACGGTGGCTCCAGCTCACTCGGTGGTAATGCGCCCAACGAGCTT
GCGACTGATCCTTCGGATCTGCGTGATGATCTGCGTCTCGATCCGAATACTATTCACCAGTACTTCCGTGAACTC
GGTTGTCGCATTGATAAGCCGCGTGAGACGGAGTTCGCCAAGTGGAATATTAAGGGTGGACGTGCGGAGGCGCAT
GCGCGTCGTGTTGCTCGCTTGCGCGTGCCTGTTGAGTTCCCTAAGGTTAGCCGTGGTGGTCGGAGGTAG
Gene >Pro_DTO377G3_2|g8964.t1
ATGCCGTCCAATAAAACAGATCACAAGCGGAAGCGTTCATCAGGCAATGATCGCCCAAGCAAAAAGCCCGCGCTG
CAGCAGCTGCCCCCGCTGGCCGCCAGCGTTGTTGAAGATAAGAGCGAGCTGGCACCGGTAATTGGTGAGTCGAAG
GCTTTCATCCAGGCTGTAAACCATCGCTAATCGAATTCTTGCGTTACAGTCGACACACCTGGTCTTCAAAGCTCG
AAATCCCTCCACTGGAATCCATATATCAAAAACCGCGCCAATGTCTCCAAGTCTGCGGCATCGACTCGGAACCCG
GGCATTGTCTCTTCAGAGATACTGCTCCAGTCCTCAGACCACCCTAAGTTGGACTTTGTCGGCCGTGAGGGCACA
GGAGATGATACCGACTCCCAAGTGAAGCACTATGTCGCAGTTATAGACCCAGAGCGCAAGACATGGAAAGTCGTG
GAGGTGCGGCGAGCGACACTGCGAGGAGCAGTGAGAAGCCGCAAGCCCGAGGACGACTCAGATGAAGAGATGGTA
TGCCCTTCGATCCGCAAGTCCGTACATCAACGGCATCCAACTAACAACCAGCACCAGAACACTATGCGCGCCCAA
CGCACAGCTCTAACAAACACCTTCGGAACCAAACAATCCCGCAAGGCCGTGCAATCCATGGCCGAGAACGCCCAG
CTCTCCAACGCCCCCACCGGCGCCGTCCCCCAAGCCGGCGCAGCCCTCATCTCCTCGCTGCCCGCAAACACAGCC
TCCGGCCTCGCCAAGGCCCTCGCCATGCAAGCCGAAGTGCAAGCCGCCAAGCCCCTCCCAACCCCGAACCTAGCC
GTCTCGCACCCCTCCGACGTCTACACAATTGAGACACTCGTTCCAGGCAGCCACTCAACCCTCAGCCAACTAAAC
GGCGTAGACGAGTGGAAGTCACAAGTGGAAGCCGGTCTTGGCGTGACAACCGTCTCACGCTACGTCTCGAACCGC
GTCGGTGCAGTCGTCAACTCCGAAAACATAACTCACCTCCAAGTCCTCCGCTTCATCCAGCTGCTAATCGAGTTC
GGACGCTGTCTCAAAAACGCAGGCGCGAACGCCAAGGGCGGCGGCCCAGGCAGCAAGCGTCTCCCGCCCCGCGAA
GACCTCCGCCGCATCCTGTCAAACACCACGGGGTCCGTCACGAAGCCCAAGCCCGGCGCCGCTGCACCGGACGCC
GCTTCCGCAGACCTGCTTCCGGAGTCCGTGATCGATGCCGTGCGTCGCCGCTTCGCGCCCAGCGGCGGCTACGTC
TCCAAGAACGACTTCACCCTCCTGCAAACTACCATCTGTGCGCTCTCGCTGCATATCCCGCCCCAGCCGGCACGC
GACGGTGGCTCCAGCTCACTCGGTGGTAATGCGCCCAACGAGCTTGCGACTGATCCTTCGGATCTGCGTGATGAT
CTGCGTCTCGATCCGAATACTATTCACCAGTACTTCCGTGAACTCGGTTGTCGCATTGATAAGCCGCGTGAGACG
GAGTTCGCCAAGTGGAATATTAAGGGTGGACGTGCGGAGGCGCATGCGCGTCGTGTTGCTCGCTTGCGCGTGCCT
GTTGAGTTCCCTAAGGTTAGCCGTGGTGGTCGGAGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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