Protein ID | Pro_DTO377G3_2|g8956.t1 |
Gene name | |
Location | scaffold_39:88729..91582 |
Strand | + |
Gene length (bp) | 2853 |
Transcript length (bp) | 2142 |
Coding sequence length (bp) | 2142 |
Protein length (aa) | 714 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02200 | STE | STE like transcription factor | 9.1E-55 | 80 | 188 |
PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 2.4E-04 | 587 | 611 |
PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 2.1E-06 | 617 | 639 |
PF13894 | zf-C2H2_4 | C2H2-type zinc finger | 9.4E-04 | 617 | 639 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005634 | nucleus | Yes |
GO:0006355 | regulation of transcription, DNA-templated | Yes |
GO:0003700 | DNA-binding transcription factor activity | Yes |
GO:0003674 | molecular_function | No |
GO:0031323 | regulation of cellular metabolic process | No |
GO:0051252 | regulation of RNA metabolic process | No |
GO:0008150 | biological_process | No |
GO:0005575 | cellular_component | No |
GO:0060255 | regulation of macromolecule metabolic process | No |
GO:0010556 | regulation of macromolecule biosynthetic process | No |
GO:0010468 | regulation of gene expression | No |
GO:0140110 | transcription regulator activity | No |
GO:0050789 | regulation of biological process | No |
GO:0043227 | membrane-bounded organelle | No |
GO:2001141 | regulation of RNA biosynthetic process | No |
GO:0065007 | biological regulation | No |
GO:0043229 | intracellular organelle | No |
GO:1903506 | regulation of nucleic acid-templated transcription | No |
GO:0051171 | regulation of nitrogen compound metabolic process | No |
GO:0043231 | intracellular membrane-bounded organelle | No |
GO:0019222 | regulation of metabolic process | No |
GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
GO:0031326 | regulation of cellular biosynthetic process | No |
GO:0080090 | regulation of primary metabolic process | No |
GO:0110165 | cellular anatomical entity | No |
GO:0043226 | organelle | No |
GO:0009889 | regulation of biosynthetic process | No |
GO:0050794 | regulation of cellular process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 20 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
C2H2 zinc finger |
STE like TF |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g8956.t1 MTEHLPIGYPLYWATLILALPVLSRSPIQLCAFHRQNPETFMLSTEAQRSLPHDAQVALQQVDNLKYFLLSAPVD WQPDQLIRRFLLPTGDYVSCVYWSGLFHISGTDIVRCLAFRFQAFGRPVKNSKKFEEGIFSDLRNLKAGVDAVLE DPKSPFLDFLYKNNCIRTQKKQKVFYWYGVPHDRLFLDALERDLKREKMNQEATTVAVSEPAMSFEFDSSQSLYE QLTKSQQVNMNSFAAHASTTYGQPNSPVLRTVDAMPPPQMAPPAIPLMQDDSGNQMYSHQQMPLSNNLVQSIIKR EQDYGPIQYDRHGMPIPRPHQRHSSMPTFYEYSPAPSFVSSQYEDYSNRGLSFEPVTPPQHSVGLGSEPAYIANE DTGLYTAIPDISSGPAYHHMMQLPPSNLSSAHYQPVPRSYSANPYPVIEGSPTYKQRRRRSSIPPNSGAATPSGA AHVQSTTPGVQAVSYAAHRPSDLRRSVSSSVAPVTEGDEATQELARNYPSALLPQKDLYHEMSRHSTPLQSLDQS TAHHSGSMANQPNDLTSLPSSGTIETAVQNHNARSERSAPGPTRRARSATMMELGPYPTKAHSCPIPSCGRTFKR LEHLKRHVRTHTQERPYPCPYCSKAFSRSDNLAQHRRIHEAQQDGQTISQTEEDLENDTHEFGSPREDMSPQPAH TMISMPNMTSMAAPLSMPSALTGMPSHMIAPQLLQQHM* |
Coding | >Pro_DTO377G3_2|g8956.t1 ATGACCGAACATCTCCCGATCGGATATCCTCTTTACTGGGCGACGTTGATCCTCGCACTTCCGGTCCTATCCCGT TCACCCATTCAGCTGTGCGCTTTTCACAGACAAAATCCCGAAACTTTTATGCTCTCCACCGAAGCACAGCGAAGC CTACCCCATGACGCGCAAGTTGCTCTTCAGCAAGTGGATAATCTGAAATATTTCCTTCTGTCTGCTCCCGTTGAC TGGCAACCGGATCAACTCATTCGACGCTTCTTGCTTCCTACGGGCGACTATGTCTCTTGTGTTTACTGGAGCGGC CTCTTCCACATCTCCGGTACCGATATTGTTCGATGTCTCGCATTTCGATTCCAAGCCTTCGGACGTCCGGTGAAG AACTCGAAAAAGTTTGAGGAGGGCATTTTCTCAGACCTGCGAAATCTCAAGGCCGGCGTAGACGCGGTGCTGGAG GATCCAAAGAGCCCATTCCTGGACTTCTTGTACAAGAACAATTGTATTCGGACCCAGAAGAAGCAAAAGGTGTTT TACTGGTACGGCGTACCTCACGACCGGCTCTTCCTTGATGCACTGGAACGGGACTTGAAGCGCGAGAAAATGAAT CAGGAGGCCACCACGGTCGCAGTCAGCGAACCGGCCATGTCCTTCGAATTCGACTCGTCTCAGTCTCTGTATGAG CAATTGACCAAGTCACAACAAGTGAATATGAACTCGTTCGCTGCCCACGCAAGTACGACATATGGCCAGCCCAAC TCCCCCGTGCTTCGGACCGTTGACGCAATGCCTCCTCCGCAGATGGCTCCCCCAGCGATCCCTCTGATGCAAGAC GACTCTGGGAATCAGATGTACAGCCACCAACAGATGCCCCTTTCGAACAATCTAGTCCAGAGCATCATTAAGCGC GAGCAGGACTATGGCCCCATCCAGTACGATCGCCACGGAATGCCCATTCCCCGCCCTCATCAGCGCCACTCTTCC ATGCCGACCTTCTACGAGTACTCCCCTGCGCCATCCTTTGTATCTTCACAATATGAGGATTACAGCAATCGCGGC CTGTCCTTTGAACCAGTCACCCCGCCACAGCATTCGGTCGGACTTGGATCGGAACCGGCTTACATCGCCAACGAA GATACCGGACTGTACACAGCGATTCCAGATATTTCAAGCGGGCCTGCCTATCACCATATGATGCAGCTGCCTCCT TCGAACCTGTCTAGTGCTCACTATCAGCCTGTGCCCCGGTCCTATTCGGCAAACCCGTATCCCGTCATCGAGGGA TCCCCAACATACAAGCAGCGCAGACGTCGGTCATCTATCCCGCCGAACAGCGGTGCTGCGACACCCAGTGGCGCA GCTCATGTCCAATCAACGACCCCGGGAGTCCAGGCGGTCTCGTACGCTGCTCACAGACCTAGTGATCTGCGGCGT TCGGTTTCTAGCTCAGTCGCTCCAGTCACGGAGGGGGATGAAGCCACTCAGGAACTCGCTCGCAATTACCCGAGT GCGCTGCTGCCACAAAAGGATCTTTATCACGAAATGTCCCGTCATAGCACGCCGCTGCAAAGCCTGGATCAAAGC ACTGCACATCATTCAGGCTCAATGGCAAACCAACCCAATGATCTGACATCTCTCCCAAGCAGTGGTACCATCGAG ACTGCGGTTCAAAATCATAATGCTCGGTCAGAGCGTTCAGCGCCTGGTCCTACTCGGAGAGCCAGGAGTGCAACC ATGATGGAGTTGGGACCGTATCCAACCAAGGCCCACTCTTGCCCTATCCCGTCATGTGGTAGAACCTTCAAGAGA TTAGAGCACCTCAAAAGACACGTGAGAACTCATACACAAGAGCGTCCGTACCCCTGCCCTTACTGCAGCAAAGCT TTCTCGAGGTCGGATAATCTTGCGCAACATCGTCGGATCCATGAAGCGCAGCAGGATGGTCAGACAATCTCTCAG ACCGAGGAAGATCTGGAGAACGATACACATGAATTCGGTTCCCCCAGGGAAGACATGTCCCCACAGCCCGCTCAC ACAATGATTAGTATGCCCAACATGACGTCGATGGCAGCTCCTTTGAGCATGCCGTCCGCCCTAACCGGTATGCCT TCACACATGATCGCTCCGCAACTTCTCCAACAACACATGTGA |
Transcript | >Pro_DTO377G3_2|g8956.t1 ATGACCGAACATCTCCCGATCGGATATCCTCTTTACTGGGCGACGTTGATCCTCGCACTTCCGGTCCTATCCCGT TCACCCATTCAGCTGTGCGCTTTTCACAGACAAAATCCCGAAACTTTTATGCTCTCCACCGAAGCACAGCGAAGC CTACCCCATGACGCGCAAGTTGCTCTTCAGCAAGTGGATAATCTGAAATATTTCCTTCTGTCTGCTCCCGTTGAC TGGCAACCGGATCAACTCATTCGACGCTTCTTGCTTCCTACGGGCGACTATGTCTCTTGTGTTTACTGGAGCGGC CTCTTCCACATCTCCGGTACCGATATTGTTCGATGTCTCGCATTTCGATTCCAAGCCTTCGGACGTCCGGTGAAG AACTCGAAAAAGTTTGAGGAGGGCATTTTCTCAGACCTGCGAAATCTCAAGGCCGGCGTAGACGCGGTGCTGGAG GATCCAAAGAGCCCATTCCTGGACTTCTTGTACAAGAACAATTGTATTCGGACCCAGAAGAAGCAAAAGGTGTTT TACTGGTACGGCGTACCTCACGACCGGCTCTTCCTTGATGCACTGGAACGGGACTTGAAGCGCGAGAAAATGAAT CAGGAGGCCACCACGGTCGCAGTCAGCGAACCGGCCATGTCCTTCGAATTCGACTCGTCTCAGTCTCTGTATGAG CAATTGACCAAGTCACAACAAGTGAATATGAACTCGTTCGCTGCCCACGCAAGTACGACATATGGCCAGCCCAAC TCCCCCGTGCTTCGGACCGTTGACGCAATGCCTCCTCCGCAGATGGCTCCCCCAGCGATCCCTCTGATGCAAGAC GACTCTGGGAATCAGATGTACAGCCACCAACAGATGCCCCTTTCGAACAATCTAGTCCAGAGCATCATTAAGCGC GAGCAGGACTATGGCCCCATCCAGTACGATCGCCACGGAATGCCCATTCCCCGCCCTCATCAGCGCCACTCTTCC ATGCCGACCTTCTACGAGTACTCCCCTGCGCCATCCTTTGTATCTTCACAATATGAGGATTACAGCAATCGCGGC CTGTCCTTTGAACCAGTCACCCCGCCACAGCATTCGGTCGGACTTGGATCGGAACCGGCTTACATCGCCAACGAA GATACCGGACTGTACACAGCGATTCCAGATATTTCAAGCGGGCCTGCCTATCACCATATGATGCAGCTGCCTCCT TCGAACCTGTCTAGTGCTCACTATCAGCCTGTGCCCCGGTCCTATTCGGCAAACCCGTATCCCGTCATCGAGGGA TCCCCAACATACAAGCAGCGCAGACGTCGGTCATCTATCCCGCCGAACAGCGGTGCTGCGACACCCAGTGGCGCA GCTCATGTCCAATCAACGACCCCGGGAGTCCAGGCGGTCTCGTACGCTGCTCACAGACCTAGTGATCTGCGGCGT TCGGTTTCTAGCTCAGTCGCTCCAGTCACGGAGGGGGATGAAGCCACTCAGGAACTCGCTCGCAATTACCCGAGT GCGCTGCTGCCACAAAAGGATCTTTATCACGAAATGTCCCGTCATAGCACGCCGCTGCAAAGCCTGGATCAAAGC ACTGCACATCATTCAGGCTCAATGGCAAACCAACCCAATGATCTGACATCTCTCCCAAGCAGTGGTACCATCGAG ACTGCGGTTCAAAATCATAATGCTCGGTCAGAGCGTTCAGCGCCTGGTCCTACTCGGAGAGCCAGGAGTGCAACC ATGATGGAGTTGGGACCGTATCCAACCAAGGCCCACTCTTGCCCTATCCCGTCATGTGGTAGAACCTTCAAGAGA TTAGAGCACCTCAAAAGACACGTGAGAACTCATACACAAGAGCGTCCGTACCCCTGCCCTTACTGCAGCAAAGCT TTCTCGAGGTCGGATAATCTTGCGCAACATCGTCGGATCCATGAAGCGCAGCAGGATGGTCAGACAATCTCTCAG ACCGAGGAAGATCTGGAGAACGATACACATGAATTCGGTTCCCCCAGGGAAGACATGTCCCCACAGCCCGCTCAC ACAATGATTAGTATGCCCAACATGACGTCGATGGCAGCTCCTTTGAGCATGCCGTCCGCCCTAACCGGTATGCCT TCACACATGATCGCTCCGCAACTTCTCCAACAACACATGTGA |
Gene | >Pro_DTO377G3_2|g8956.t1 ATGACCGGTCAGACGTCCCTGGGCGCTTCCCCCATTCCCAGCTTCGATTATTATTAGACTTGACTGTATCTTCTT CCCCCCCTTCTTCTTCTTCACCAATACTCGAGCTTCTTCTTCACTTTCGTTTCTTTCTTCCGCTGCGCGCGAAAA TCCCCAGAGGCTTACCGGCTGGTCCAGTTCCATTCTCTGACAATCTCTCTTTCTTTCTCCTTGTCTACGAGGCTG GTTCCTCCGTTCCCTTAGCCTTTCGTGCATTCCTTGTGTGATCTAGAACATCTCCCGATCGGATATCCTCTTTAC TGGGCGACGTTGATCCTCGCACTTCCGGTCCTATCCCGTTCACCCATTCAGCTGGTGAGTTTGATCCGAGGTCTC GCAGCTATGTCTCAGCAGAGTCGCAGAGGGTTCCTTGAATTGGACTCAGATCGCCTCTTTGTTTGCGCATGGGTT ATCATGCGGTCTTTTCCCCGGTGCTAATTATCTATATAGTGCGCTTTTCACAGACAAAATGTATCCTCAACCAGG TGCTCCAATTCCGATGGCACCACCTCAAAAGCCCGAAACTTTTATGCTCTCCACCGAAGCACAGCGAAGCCTACC CCATGACGCGCAAGTTGCTCTTCAGCAAGTGGATAATCGTATGTCTTTGGGTTATCTTTATCCCCCGCATCAAAG CAATGTATTGACATGGGGCCAGTGAAATATTTCCTTCTGTCTGCTCCCGTTGACTGGCAACCGGATCAACTCATT CGACGCTTCTTGCTTCCTACGGGCGACTATGTCTCTTGTGTTTACTGGTTCGTCTCACTCTTGAGCGTGATGGTT TGGGAAGCCGACTAACCCGGTCTCAATAGGAGCGGCCTCTTCCACATCTCCGGTACCGATATTGTTCGATGTCTC GCATTTCGATTCCAAGCCTTCGGACGTCCGGTGAAGAACTCGAAAAAGTTTGAGGAGGGCATTTTCTCAGACCTG CGAAATCTCAAGGCCGGCGTAGACGCGGTGCTGGAGGATCCAAAGAGCCCATTCCTGGACTTCTTGTACAAGAAC AATTGTATTCGGACCCAGAAGAAGCAAAAGGTGTTTTACTGGTACGGCGTACCTCACGACCGGCTCTTCCTTGAT GCACTGGAACGGGACTTGAAGCGCGAGAAAATGAATCAGGAGGCCACCACGGTCGCAGTCAGCGAACCGGCCATG TCCTTCGAATTCGACTCGTCTCAGTCTCTGTATGAGCAATTGACCAAGTCACAACAAGTGAATATGAACTCGTTC GCTGCCCACGCAAGTACGACATATGGCCAGCCCAACTCCCCCGTGCTTCGGACCGTTGACGCAATGCCTCCTCCG CAGATGGCTCCCCCAGCGATCCCTCTGATGCAAGACGACTCTGGGAATCAGATGTACAGCCACCAACAGATGCCC CTTTCGAACAATCTAGTCCAGAGCATCATTAAGCGCGAGCAGGACTATGGCCCCATCCAGTACGATCGCCACGGA ATGCCCATTCCCCGCCCTCATCAGCGCCACTCTTCCATGCCGACCTTCTACGAGTACTCCCCTGCGCCATCCTTT GTATCTTCACAATATGAGGATTACAGCAATCGCGGCCTGTCCTTTGAACCAGTCACCCCGCCACAGCATTCGGTC GGACTTGGATCGGAACCGGCTTACATCGCCAACGAAGATACCGGACTGTACACAGCGATTCCAGATATTTCAAGC GGGCCTGCCTATCACCATATGATGCAGCTGCCTCCTTCGAACCTGTCTAGTGCTCACTATCAGCCTGTGCCCCGG TCCTATTCGGCAAACCCGTATCCCGTCATCGAGGGATCCCCAACATACAAGCAGCGCAGACGTCGGTCATCTATC CCGCCGAACAGCGGTGCTGCGACACCCAGTGGCGCAGCTCATGTCCAATCAACGACCCCGGGAGTCCAGGCGGTC TCGTACGCTGCTCACAGACCTAGTGATCTGCGGCGTTCGGTTTCTAGCTCAGTCGCTCCAGTCACGGAGGGGGAT GAAGCCACTCAGGAACTCGCTCGCAATTACCCGAGTGCGCTGCTGCCACAAAAGGATCTTTATCACGAAATGTCC CGTCATAGCACGCCGCTGCAAAGCCTGGATCAAAGCACTGCACATCATTCAGGCTCAATGGCAAACCAACCCAAT GATCTGACATCTCTCCCAAGCAGTGGTACCATCGAGACTGCGGTTCAAAATCATAATGCTCGGTCAGAGCGTTCA GCGCCTGGTCCTACTCGGAGAGCCAGGAGTGCAACCATGATGGAGTTGGGACCGTATCCAACCAAGGCCCACTCT TGCCCTATCCCGTCATGTGGTAGAACCTTCAAGAGATTAGAGCACCTCAAAAGGTAAGCTTACTTCTATTTTGTC ACTCACCCTGGTGGCGCAGGTTTCACCGAGCGCCGGTGAGTTCGTTTCAATTGCCGCCGACTAACCCGTTTTTCT AGACACGTGAGAACTCATACACAAGAGCGTCCGTACCCCTGCCCTTACTGCAGCAAAGCTTTCTCGAGGTCGGAT AATCTTGCGCAGTAAGTTATTATTGTCTTATTTATTATACGACTTTTGCTAATATTCAGTAGACATCGTCGGATC CATGAAGCGCAGCAGGATGGTCAGACAATCTCTCAGACCGAGGAAGATCTGGAGAACGATACACATGAATTCGGT TCCCCCAGGGAAGACATGTCCCCACAGCCCGCTCACACAATGATTAGTATGCCCAACATGACGTCGATGGCAGCT CCTTTGAGCATGCCGTCCGCCCTAACCGGTATGCCTTCACACATGATCGCTCCGCAACTTCTCCAACAACACATG TGA |