Protein ID | Pro_DTO377G3_2|g895.t1 |
Gene name | |
Location | scaffold_01:2384410..2387592 |
Strand | + |
Gene length (bp) | 3182 |
Transcript length (bp) | 2991 |
Coding sequence length (bp) | 2991 |
Protein length (aa) | 997 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.4E-11 | 635 | 701 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 2.0E-10 | 709 | 769 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.5E-10 | 775 | 836 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 2.2E-10 | 839 | 898 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.2E-09 | 908 | 991 |
PF00023 | Ank | Ankyrin repeat | 9.9E-05 | 674 | 701 |
PF00023 | Ank | Ankyrin repeat | 1.1E-02 | 807 | 836 |
PF00023 | Ank | Ankyrin repeat | 6.1E-04 | 839 | 867 |
PF00023 | Ank | Ankyrin repeat | 2.9E-03 | 873 | 899 |
PF00023 | Ank | Ankyrin repeat | 8.7E-03 | 938 | 961 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 1.5E-05 | 645 | 694 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 6.3E-06 | 710 | 761 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 5.5E-08 | 839 | 890 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 5.0E-05 | 905 | 955 |
PF13606 | Ank_3 | Ankyrin repeat | 1.8E-03 | 674 | 701 |
PF05729 | NACHT | NACHT domain | 3.5E-06 | 207 | 365 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g895.t1 MSFGVSIGDFISVLTLANKLRRDFVGAPSQFNSISREVRGLAIILQDVDVQLLGHDTNDQQQNQLGQISHSCVIL LNELQNALEKYKLVEYSGTSIHKKARGIWKRIVWEPEDISELRGRLMSNVILLQSFLSAISSQTMAATKQTLEQL NYRQEGNEKSCILDWLSAVDYTLQQSDLLGRRQGGTGKWLLDSQEYKHWLRTRRGTLFCPGMPGAGKTICSAILV DDLTTRFEDTPDVGIAYIYCNFNRQDEQTAQELLSSLLKQLSQKKTSVPDAVKDLYKRYKTASTRPRFDEISKTL HSLVSTYSDVFIVIDALDECESTCRTRVLDELNKLRAGPGANVFATSRPTEINDLFEGGSVLEIQAQEDDVRRYL AGNMFRLPGFVSRNTALQEEIMTAISRHVQGMFLLAQLYFESLIGRRSPKSTRTALKEFSKGFNDYAYDKAYDDA MSRIQGQLREQTDLAIQTLSWLTCARRPLTSLELQHALAIEEGESSLDEENIPEIEDILTVCAGLVTVENESGII RLVHYTTQEYLERKKDMLFPSAETEISMLCVTYISFDTFGSGICESDEAFEERLESHPFYRYAVRHWGDHVRTTK DLHPDVIEFLKNQSKVEASEQALHVRRHSIPKDWSQNFPREKTGLHLAADRGIEAAVSYFLQHQHSVDVRHNGGW TALQYAISRDHLNVVKLLLSCGADANGTGQDNFTSPLSLAAQYGQEDIVRLLLEREVDVDGQTGWYQTALIAACD KGYLNIVETLLNNNANINAESEIHGTPLAAASEAGHWKIVTFLLEKGATPSSQGNEGETALASAALQGQEDIVQI LLDHHADVNQREGTALIAACRSGHEQVVRILLANGADPNAGNGGHSSALVAASMNGNQQIVHMLLESGANINAES YLGPALVAAAKTGNDHIVKVLLENGAEIHGRGKVQGCALHAAASRGDSQIVQMLLDRGADSTIRAGVYKTPLRAA LMGGHQEVAALLKRQGQQLRV* |
Coding | >Pro_DTO377G3_2|g895.t1 ATGAGTTTTGGAGTGAGCATCGGGGACTTCATTTCGGTTCTTACTTTGGCTAATAAGCTCCGAAGAGACTTTGTT GGCGCTCCGAGCCAGTTCAACAGTATCTCCAGAGAGGTCAGGGGGCTGGCAATTATTCTCCAGGATGTCGATGTT CAACTACTGGGCCATGATACCAATGATCAACAACAAAACCAACTAGGGCAAATCAGTCACAGCTGTGTGATCCTG CTGAACGAGCTTCAAAATGCTCTGGAGAAATATAAACTCGTTGAATACAGTGGCACATCAATTCACAAAAAAGCT AGAGGTATTTGGAAGAGGATTGTCTGGGAGCCGGAGGACATAAGTGAGCTCCGAGGTCGCCTAATGTCTAATGTG ATATTGCTCCAGTCATTTTTGAGTGCTATATCAAGTCAAACGATGGCTGCGACAAAGCAAACACTGGAACAGCTC AACTACAGACAAGAAGGCAATGAAAAGTCTTGCATTCTCGACTGGCTGTCTGCCGTGGATTACACGTTACAGCAG AGTGATCTTCTCGGTCGACGACAAGGGGGAACTGGGAAATGGCTTCTCGATTCGCAAGAATATAAACATTGGCTT CGAACACGCCGAGGCACCTTGTTTTGTCCCGGAATGCCGGGTGCGGGAAAGACCATCTGTTCTGCTATCCTTGTC GATGATTTGACTACGCGCTTTGAGGATACCCCAGATGTCGGAATAGCTTACATTTATTGCAACTTCAATCGACAA GATGAACAGACAGCTCAAGAGTTGCTTTCAAGTCTGTTGAAGCAATTAAGTCAGAAGAAGACATCTGTTCCGGAT GCAGTCAAGGACCTATACAAGCGCTACAAAACTGCATCGACGCGTCCCCGATTCGATGAAATATCGAAAACTCTG CATTCACTCGTTTCCACGTATTCCGATGTGTTTATTGTCATCGATGCCCTCGATGAGTGCGAATCCACTTGCCGT ACCAGGGTTTTGGACGAGCTCAATAAACTTCGTGCCGGGCCTGGAGCAAATGTCTTCGCCACATCAAGACCTACA GAAATTAATGATTTGTTTGAAGGGGGTTCCGTTCTGGAGATCCAGGCACAAGAAGACGACGTTAGACGGTACCTT GCTGGGAATATGTTCCGACTCCCGGGGTTTGTAAGCCGAAATACTGCATTGCAAGAGGAGATTATGACTGCAATC TCACGCCATGTACAGGGAATGTTTCTCCTTGCACAGCTTTATTTTGAGTCACTGATCGGTAGAAGGTCACCTAAA TCTACTCGAACCGCTCTGAAAGAGTTTTCGAAGGGGTTTAATGACTATGCATACGACAAGGCCTATGACGACGCG ATGAGCCGCATTCAAGGGCAACTGAGAGAGCAAACTGATTTGGCGATACAAACTCTATCTTGGCTCACATGCGCG AGAAGGCCACTCACTTCATTGGAACTGCAGCATGCTCTTGCAATAGAAGAAGGAGAATCTAGTCTTGACGAGGAG AACATTCCGGAGATTGAAGACATCCTTACTGTGTGCGCTGGTCTTGTTACCGTTGAAAATGAAAGCGGGATAATT CGACTGGTCCATTATACAACGCAAGAATACCTCGAGCGGAAGAAAGATATGCTCTTTCCCAGCGCCGAAACTGAA ATCAGCATGTTATGTGTCACTTACATCTCGTTCGACACGTTTGGGTCTGGGATTTGTGAAAGTGATGAAGCGTTT GAGGAGCGTCTAGAATCACATCCATTCTACCGTTATGCGGTACGCCATTGGGGCGACCATGTGAGAACAACCAAA GATCTGCATCCTGACGTGATAGAGTTTCTGAAAAACCAGTCGAAAGTTGAAGCTTCAGAACAAGCACTCCATGTC AGGAGGCACTCAATCCCAAAAGATTGGAGCCAGAATTTTCCAAGGGAAAAGACGGGACTGCATCTCGCTGCAGAC CGTGGAATTGAGGCAGCAGTATCCTACTTTCTTCAACACCAGCACTCCGTGGACGTACGTCATAACGGTGGCTGG ACAGCATTGCAATATGCCATTTCAAGAGACCACCTGAATGTCGTCAAGTTACTTCTTTCCTGTGGAGCTGATGCA AACGGAACAGGTCAGGATAATTTCACCAGCCCACTTTCACTTGCTGCCCAGTACGGACAAGAGGACATTGTCAGA CTTCTTCTTGAGCGCGAAGTTGACGTTGATGGCCAGACTGGATGGTACCAAACCGCACTCATCGCAGCGTGTGAC AAGGGCTATCTAAATATCGTTGAAACTCTCCTTAACAACAATGCAAATATCAATGCCGAAAGTGAGATACATGGT ACACCCCTCGCTGCTGCGTCAGAGGCGGGTCACTGGAAAATTGTGACCTTCTTACTTGAGAAGGGGGCTACACCC AGTTCTCAAGGGAACGAGGGTGAAACCGCTTTGGCATCAGCAGCATTACAGGGCCAGGAAGATATCGTACAAATC TTGCTCGATCATCATGCGGATGTCAACCAACGAGAAGGAACTGCCCTCATAGCGGCTTGTCGCAGCGGGCATGAG CAAGTGGTACGAATACTCCTGGCTAATGGTGCCGACCCGAATGCGGGAAACGGAGGACATAGCAGCGCACTGGTA GCAGCTTCGATGAACGGAAATCAGCAAATAGTGCACATGCTCCTCGAGAGCGGTGCCAACATCAACGCGGAAAGT TATCTCGGACCAGCACTAGTTGCTGCTGCAAAAACGGGGAACGACCACATAGTCAAGGTGCTACTCGAAAATGGT GCTGAGATTCACGGCCGTGGCAAAGTCCAGGGATGCGCATTACATGCAGCTGCTTCCCGCGGAGATAGCCAGATA GTGCAAATGCTCCTCGACAGAGGTGCCGACAGCACCATTCGTGCTGGTGTTTACAAAACGCCCCTGCGAGCAGCC TTGATGGGAGGTCATCAGGAGGTTGCCGCGCTTCTCAAAAGACAGGGGCAGCAGTTGAGGGTCTGA |
Transcript | >Pro_DTO377G3_2|g895.t1 ATGAGTTTTGGAGTGAGCATCGGGGACTTCATTTCGGTTCTTACTTTGGCTAATAAGCTCCGAAGAGACTTTGTT GGCGCTCCGAGCCAGTTCAACAGTATCTCCAGAGAGGTCAGGGGGCTGGCAATTATTCTCCAGGATGTCGATGTT CAACTACTGGGCCATGATACCAATGATCAACAACAAAACCAACTAGGGCAAATCAGTCACAGCTGTGTGATCCTG CTGAACGAGCTTCAAAATGCTCTGGAGAAATATAAACTCGTTGAATACAGTGGCACATCAATTCACAAAAAAGCT AGAGGTATTTGGAAGAGGATTGTCTGGGAGCCGGAGGACATAAGTGAGCTCCGAGGTCGCCTAATGTCTAATGTG ATATTGCTCCAGTCATTTTTGAGTGCTATATCAAGTCAAACGATGGCTGCGACAAAGCAAACACTGGAACAGCTC AACTACAGACAAGAAGGCAATGAAAAGTCTTGCATTCTCGACTGGCTGTCTGCCGTGGATTACACGTTACAGCAG AGTGATCTTCTCGGTCGACGACAAGGGGGAACTGGGAAATGGCTTCTCGATTCGCAAGAATATAAACATTGGCTT CGAACACGCCGAGGCACCTTGTTTTGTCCCGGAATGCCGGGTGCGGGAAAGACCATCTGTTCTGCTATCCTTGTC GATGATTTGACTACGCGCTTTGAGGATACCCCAGATGTCGGAATAGCTTACATTTATTGCAACTTCAATCGACAA GATGAACAGACAGCTCAAGAGTTGCTTTCAAGTCTGTTGAAGCAATTAAGTCAGAAGAAGACATCTGTTCCGGAT GCAGTCAAGGACCTATACAAGCGCTACAAAACTGCATCGACGCGTCCCCGATTCGATGAAATATCGAAAACTCTG CATTCACTCGTTTCCACGTATTCCGATGTGTTTATTGTCATCGATGCCCTCGATGAGTGCGAATCCACTTGCCGT ACCAGGGTTTTGGACGAGCTCAATAAACTTCGTGCCGGGCCTGGAGCAAATGTCTTCGCCACATCAAGACCTACA GAAATTAATGATTTGTTTGAAGGGGGTTCCGTTCTGGAGATCCAGGCACAAGAAGACGACGTTAGACGGTACCTT GCTGGGAATATGTTCCGACTCCCGGGGTTTGTAAGCCGAAATACTGCATTGCAAGAGGAGATTATGACTGCAATC TCACGCCATGTACAGGGAATGTTTCTCCTTGCACAGCTTTATTTTGAGTCACTGATCGGTAGAAGGTCACCTAAA TCTACTCGAACCGCTCTGAAAGAGTTTTCGAAGGGGTTTAATGACTATGCATACGACAAGGCCTATGACGACGCG ATGAGCCGCATTCAAGGGCAACTGAGAGAGCAAACTGATTTGGCGATACAAACTCTATCTTGGCTCACATGCGCG AGAAGGCCACTCACTTCATTGGAACTGCAGCATGCTCTTGCAATAGAAGAAGGAGAATCTAGTCTTGACGAGGAG AACATTCCGGAGATTGAAGACATCCTTACTGTGTGCGCTGGTCTTGTTACCGTTGAAAATGAAAGCGGGATAATT CGACTGGTCCATTATACAACGCAAGAATACCTCGAGCGGAAGAAAGATATGCTCTTTCCCAGCGCCGAAACTGAA ATCAGCATGTTATGTGTCACTTACATCTCGTTCGACACGTTTGGGTCTGGGATTTGTGAAAGTGATGAAGCGTTT GAGGAGCGTCTAGAATCACATCCATTCTACCGTTATGCGGTACGCCATTGGGGCGACCATGTGAGAACAACCAAA GATCTGCATCCTGACGTGATAGAGTTTCTGAAAAACCAGTCGAAAGTTGAAGCTTCAGAACAAGCACTCCATGTC AGGAGGCACTCAATCCCAAAAGATTGGAGCCAGAATTTTCCAAGGGAAAAGACGGGACTGCATCTCGCTGCAGAC CGTGGAATTGAGGCAGCAGTATCCTACTTTCTTCAACACCAGCACTCCGTGGACGTACGTCATAACGGTGGCTGG ACAGCATTGCAATATGCCATTTCAAGAGACCACCTGAATGTCGTCAAGTTACTTCTTTCCTGTGGAGCTGATGCA AACGGAACAGGTCAGGATAATTTCACCAGCCCACTTTCACTTGCTGCCCAGTACGGACAAGAGGACATTGTCAGA CTTCTTCTTGAGCGCGAAGTTGACGTTGATGGCCAGACTGGATGGTACCAAACCGCACTCATCGCAGCGTGTGAC AAGGGCTATCTAAATATCGTTGAAACTCTCCTTAACAACAATGCAAATATCAATGCCGAAAGTGAGATACATGGT ACACCCCTCGCTGCTGCGTCAGAGGCGGGTCACTGGAAAATTGTGACCTTCTTACTTGAGAAGGGGGCTACACCC AGTTCTCAAGGGAACGAGGGTGAAACCGCTTTGGCATCAGCAGCATTACAGGGCCAGGAAGATATCGTACAAATC TTGCTCGATCATCATGCGGATGTCAACCAACGAGAAGGAACTGCCCTCATAGCGGCTTGTCGCAGCGGGCATGAG CAAGTGGTACGAATACTCCTGGCTAATGGTGCCGACCCGAATGCGGGAAACGGAGGACATAGCAGCGCACTGGTA GCAGCTTCGATGAACGGAAATCAGCAAATAGTGCACATGCTCCTCGAGAGCGGTGCCAACATCAACGCGGAAAGT TATCTCGGACCAGCACTAGTTGCTGCTGCAAAAACGGGGAACGACCACATAGTCAAGGTGCTACTCGAAAATGGT GCTGAGATTCACGGCCGTGGCAAAGTCCAGGGATGCGCATTACATGCAGCTGCTTCCCGCGGAGATAGCCAGATA GTGCAAATGCTCCTCGACAGAGGTGCCGACAGCACCATTCGTGCTGGTGTTTACAAAACGCCCCTGCGAGCAGCC TTGATGGGAGGTCATCAGGAGGTTGCCGCGCTTCTCAAAAGACAGGGGCAGCAGTTGAGGGTCTGA |
Gene | >Pro_DTO377G3_2|g895.t1 ATGAGTTTTGGAGTGAGCATCGGGGACTTCATTTCGGTTCTTACTTTGGCTAATAAGCTCCGAAGAGACTTTGTT GGCGCTCCGAGCCAGTTCAACAGTATCTCCAGAGAGTGCGTCGATATTGTACACCTAGGTTGTCGGCCAGTAACT GATAATTTTGGTCTTACAGGGTCAGGGGGCTGGCAATTATTCTCCAGGATGTCGATGTTCAACTACTGGGCCATG ATACCAATGATCAACAACAAAACCAACTAGGGCAAATCAGTCACAGCTGTGTGATCCTGCTGAACGAGCTTCAAA ATGCTCTGGAGAAATATAAACTCGTTGAATACAGTGGCACATCAATTCACAAAAAAGCTAGAGGTATTTGGAAGA GGATTGTCTGGGAGCCGGAGGACATAAGTGAGCTCCGAGGTCGCCTAATGTCTAATGTGATATTGCTCCAGTCAT TTTTGAGTGCTATATCAAGGTATCATATATACTTCTCCCCTTCTGCCCCACCTGCCGCACCTAAGCATGACCAAC ATCTGAAATCCATAGTCAAACGATGGCTGCGACAAAGCAAACACTGGAACAGCTCAACTACAGACAAGAAGGCAA TGAAAAGTCTTGCATTCTCGACTGGCTGTCTGCCGTGGATTACACGTTACAGCAGAGTGATCTTCTCGGTCGACG ACAAGGGGGAACTGGGAAATGGCTTCTCGATTCGCAAGAATATAAACATTGGCTTCGAACACGCCGAGGCACCTT GTTTTGTCCCGGAATGCCGGGTGCGGGAAAGACCATCTGTTCTGCTATCCTTGTCGATGATTTGACTACGCGCTT TGAGGATACCCCAGATGTCGGAATAGCTTACATTTATTGCAACTTCAATCGACAAGATGAACAGACAGCTCAAGA GTTGCTTTCAAGTCTGTTGAAGCAATTAAGTCAGAAGAAGACATCTGTTCCGGATGCAGTCAAGGACCTATACAA GCGCTACAAAACTGCATCGACGCGTCCCCGATTCGATGAAATATCGAAAACTCTGCATTCACTCGTTTCCACGTA TTCCGATGTGTTTATTGTCATCGATGCCCTCGATGAGTGCGAATCCACTTGCCGTACCAGGGTTTTGGACGAGCT CAATAAACTTCGTGCCGGGCCTGGAGCAAATGTCTTCGCCACATCAAGACCTACAGAAATTAATGATTTGTTTGA AGGGGGTTCCGTTCTGGAGATCCAGGCACAAGAAGACGACGTTAGACGGTACCTTGCTGGGAATATGTTCCGACT CCCGGGGTTTGTAAGCCGAAATACTGCATTGCAAGAGGAGATTATGACTGCAATCTCACGCCATGTACAGGGAAT GTGAGTGCTCTTTATGAGATTGAATCTCCACAAAACACCTAGATTGCTCATTTACTTTCAGGTTTCTCCTTGCAC AGCTTTATTTTGAGTCACTGATCGGTAGAAGGTCACCTAAATCTACTCGAACCGCTCTGAAAGAGTTTTCGAAGG GGTTTAATGACTATGCATACGACAAGGCCTATGACGACGCGATGAGCCGCATTCAAGGGCAACTGAGAGAGCAAA CTGATTTGGCGATACAAACTCTATCTTGGCTCACATGCGCGAGAAGGCCACTCACTTCATTGGAACTGCAGCATG CTCTTGCAATAGAAGAAGGAGAATCTAGTCTTGACGAGGAGAACATTCCGGAGATTGAAGACATCCTTACTGTGT GCGCTGGTCTTGTTACCGTTGAAAATGAAAGCGGGATAATTCGACTGGTCCATTATACAACGCAAGAATACCTCG AGCGGAAGAAAGATATGCTCTTTCCCAGCGCCGAAACTGAAATCAGCATGTTATGTGTCACTTACATCTCGTTCG ACACGTTTGGGTCTGGGATTTGTGAAAGTGATGAAGCGTTTGAGGAGCGTCTAGAATCACATCCATTCTACCGTT ATGCGGTACGCCATTGGGGCGACCATGTGAGAACAACCAAAGATCTGCATCCTGACGTGATAGAGTTTCTGAAAA ACCAGTCGAAAGTTGAAGCTTCAGAACAAGCACTCCATGTCAGGAGGCACTCAATCCCAAAAGATTGGAGCCAGA ATTTTCCAAGGGAAAAGACGGGACTGCATCTCGCTGCAGACCGTGGAATTGAGGCAGCAGTATCCTACTTTCTTC AACACCAGCACTCCGTGGACGTACGTCATAACGGTGGCTGGACAGCATTGCAATATGCCATTTCAAGAGACCACC TGAATGTCGTCAAGTTACTTCTTTCCTGTGGAGCTGATGCAAACGGAACAGGTCAGGATAATTTCACCAGCCCAC TTTCACTTGCTGCCCAGTACGGACAAGAGGACATTGTCAGACTTCTTCTTGAGCGCGAAGTTGACGTTGATGGCC AGACTGGATGGTACCAAACCGCACTCATCGCAGCGTGTGACAAGGGCTATCTAAATATCGTTGAAACTCTCCTTA ACAACAATGCAAATATCAATGCCGAAAGTGAGATACATGGTACACCCCTCGCTGCTGCGTCAGAGGCGGGTCACT GGAAAATTGTGACCTTCTTACTTGAGAAGGGGGCTACACCCAGTTCTCAAGGGAACGAGGGTGAAACCGCTTTGG CATCAGCAGCATTACAGGGCCAGGAAGATATCGTACAAATCTTGCTCGATCATCATGCGGATGTCAACCAACGAG AAGGAACTGCCCTCATAGCGGCTTGTCGCAGCGGGCATGAGCAAGTGGTACGAATACTCCTGGCTAATGGTGCCG ACCCGAATGCGGGAAACGGAGGACATAGCAGCGCACTGGTAGCAGCTTCGATGAACGGAAATCAGCAAATAGTGC ACATGCTCCTCGAGAGCGGTGCCAACATCAACGCGGAAAGTTATCTCGGACCAGCACTAGTTGCTGCTGCAAAAA CGGGGAACGACCACATAGTCAAGGTGCTACTCGAAAATGGTGCTGAGATTCACGGCCGTGGCAAAGTCCAGGGAT GCGCATTACATGCAGCTGCTTCCCGCGGAGATAGCCAGATAGTGCAAATGCTCCTCGACAGAGGTGCCGACAGCA CCATTCGTGCTGGTGTTTACAAAACGCCCCTGCGAGCAGCCTTGATGGGAGGTCATCAGGAGGTTGCCGCGCTTC TCAAAAGACAGGGGCAGCAGTTGAGGGTCTGA |