Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8937.t1
Gene name
Locationscaffold_39:44356..45339
Strand+
Gene length (bp)983
Transcript length (bp)771
Coding sequence length (bp)771
Protein length (aa) 257

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00977 His_biosynth Histidine biosynthesis protein 5.9E-31 6 236

GO

GO Term Description Terminal node
GO:0000105 histidine biosynthetic process Yes
GO:0044281 small molecule metabolic process No
GO:0019752 carboxylic acid metabolic process No
GO:1901566 organonitrogen compound biosynthetic process No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No
GO:0006082 organic acid metabolic process No
GO:0008152 metabolic process No
GO:0006520 cellular amino acid metabolic process No
GO:0006547 histidine metabolic process No
GO:0046394 carboxylic acid biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008652 cellular amino acid biosynthetic process No
GO:0044238 primary metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0016053 organic acid biosynthetic process No
GO:0044283 small molecule biosynthetic process No
GO:0043436 oxoacid metabolic process No
GO:0044237 cellular metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0009987 cellular process No
GO:1901576 organic substance biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8937.t1
MTKFRPCIDLHSGQVKQIVGGTLSQVAADLKTNYVSKFPASHYAGLYQKHDLRGGHIVKLGPGNEEAAQEALQTW
PGGLQVAGGITDKNAQYWIDQGADKVIITSFLFPGGKFSLERLESVLSALGGDKSKLILDLSCRRKDNTWFVAMD
RWQTITEMEINQASIAMLEPYCAEFLIHAADVEGLQQGVDEELVSRLAEWCTIPVTYAGGARHLQDLEKVHTSSK
GRVDLTIGSALDIFGGSGVTFDECIEWNKTH*
Coding >Pro_DTO377G3_2|g8937.t1
ATGACTAAATTCAGACCGTGCATTGACCTGCATTCGGGGCAGGTCAAGCAGATTGTGGGTGGTACACTCAGCCAG
GTGGCCGCAGACCTGAAGACCAATTACGTATCCAAGTTTCCGGCCAGCCACTATGCGGGATTGTATCAGAAGCAC
GATTTGCGCGGCGGGCACATCGTGAAGCTTGGACCTGGGAATGAAGAAGCAGCCCAAGAGGCATTGCAGACATGG
CCGGGTGGGCTGCAAGTGGCCGGTGGTATCACCGATAAGAATGCGCAATATTGGATCGATCAGGGTGCGGACAAG
GTTATCATCACTTCATTCCTCTTCCCTGGGGGCAAGTTCTCGCTCGAGCGGCTGGAATCGGTTCTTTCTGCTCTG
GGCGGCGACAAGTCAAAGCTGATCCTGGACCTGAGCTGCCGCAGAAAAGACAATACTTGGTTCGTTGCGATGGAC
CGCTGGCAAACCATCACAGAGATGGAGATCAACCAGGCATCGATCGCAATGTTGGAACCATATTGCGCCGAGTTC
CTAATCCACGCTGCAGACGTAGAGGGCCTGCAACAAGGCGTCGATGAAGAACTTGTTTCAAGATTGGCTGAATGG
TGTACTATCCCCGTGACCTACGCAGGAGGTGCACGCCATTTACAAGATCTCGAAAAGGTCCACACTAGTAGCAAG
GGAAGAGTGGATTTGACGATTGGAAGCGCGCTAGATATCTTTGGCGGCTCTGGAGTGACGTTCGATGAATGTATC
GAATGGAACAAAACGCATTAA
Transcript >Pro_DTO377G3_2|g8937.t1
ATGACTAAATTCAGACCGTGCATTGACCTGCATTCGGGGCAGGTCAAGCAGATTGTGGGTGGTACACTCAGCCAG
GTGGCCGCAGACCTGAAGACCAATTACGTATCCAAGTTTCCGGCCAGCCACTATGCGGGATTGTATCAGAAGCAC
GATTTGCGCGGCGGGCACATCGTGAAGCTTGGACCTGGGAATGAAGAAGCAGCCCAAGAGGCATTGCAGACATGG
CCGGGTGGGCTGCAAGTGGCCGGTGGTATCACCGATAAGAATGCGCAATATTGGATCGATCAGGGTGCGGACAAG
GTTATCATCACTTCATTCCTCTTCCCTGGGGGCAAGTTCTCGCTCGAGCGGCTGGAATCGGTTCTTTCTGCTCTG
GGCGGCGACAAGTCAAAGCTGATCCTGGACCTGAGCTGCCGCAGAAAAGACAATACTTGGTTCGTTGCGATGGAC
CGCTGGCAAACCATCACAGAGATGGAGATCAACCAGGCATCGATCGCAATGTTGGAACCATATTGCGCCGAGTTC
CTAATCCACGCTGCAGACGTAGAGGGCCTGCAACAAGGCGTCGATGAAGAACTTGTTTCAAGATTGGCTGAATGG
TGTACTATCCCCGTGACCTACGCAGGAGGTGCACGCCATTTACAAGATCTCGAAAAGGTCCACACTAGTAGCAAG
GGAAGAGTGGATTTGACGATTGGAAGCGCGCTAGATATCTTTGGCGGCTCTGGAGTGACGTTCGATGAATGTATC
GAATGGAACAAAACGCATTAA
Gene >Pro_DTO377G3_2|g8937.t1
ATGACTAAATTCAGACCGTGCATTGACCTGCATTCGGGGCAGGTCAAGCAGATTGTGGGTGGTACACTCAGCCAG
GTGGCCGCAGACCTGAAGACCAATTACGTATCCAAGTTTCCGGCCAGCCACTATGCGGGATTGTATCAGAAGCAC
GATTTGCGCGGCGGGCACATCGTGAAGCTTGGACCTGGGAATGAAGAAGCAGCCCAAGAGGCATTGCAGACATGG
CCGGGTGGGCTGCAAGTGGCCGGTGGTATCACCGATAAGAATGCGCAATATTGGATCGATCAGGGTGCGGACAAG
GTAAGCCCCCGGATTCCAGACGGATTACTATTTCTTCGCCTGAATTAGGCTTGGTTGAGAACTCAATGATATATA
TGCTTTTATTTTTACCTATTTGCTTGCGCTTCGTCATAGTAAGAGTCCAATGACGCTAACCATGTGGAATGCGGG
CAATAGGTTATCATCACTTCATTCCTCTTCCCTGGGGGCAAGTTCTCGCTCGAGCGGCTGGAATCGGTTCTTTCT
GCTCTGGGCGGCGACAAGTCAAAGCTGATCCTGGACCTGAGCTGCCGCAGAAAAGACAATACTTGGTTCGTTGCG
ATGGACCGCTGGCAAACCATCACAGAGATGGAGATCAACCAGGGTATGTCCTACCTGCACTGAACCTAGGCTGGT
TCTTAGCCCACTGACATTATGTAGCATCGATCGCAATGTTGGAACCATATTGCGCCGAGTTCCTAATCCACGCTG
CAGACGTAGAGGGCCTGCAACAAGGCGTCGATGAAGAACTTGTTTCAAGATTGGCTGAATGGTGTACTATCCCCG
TGACCTACGCAGGAGGTGCACGCCATTTACAAGATCTCGAAAAGGTCCACACTAGTAGCAAGGGAAGAGTGGATT
TGACGATTGGAAGCGCGCTAGATATCTTTGGCGGCTCTGGAGTGACGTTCGATGAATGTATCGAATGGAACAAAA
CGCATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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