Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g893.t1
Gene name
Locationscaffold_01:2378627..2379380
Strand+
Gene length (bp)753
Transcript length (bp)564
Coding sequence length (bp)564
Protein length (aa) 188

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00838 TCTP Translationally controlled tumour protein 2.0E-50 1 183

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g893.t1
MIIYTDIVSGDEIVADTFDLVPNKEFDILWECDCRKYLKRANEDFQLEGANPSAEDADEDGGEGEATMVHDIEDQ
FRLVWLKVEDGAKPSKESYKTHIKSYLKKLHKNAAPKFAEAGTPEAAEAAEKAWKTKAAGAMKKILANWDNYDVL
MGQSMDGDAMHVLIDFREDGVTPYATVWADGLKAVKV*
Coding >Pro_DTO377G3_2|g893.t1
ATGATTATCTACACTGACATCGTTTCCGGTGACGAGATCGTCGCCGATACCTTTGACCTTGTCCCCAACAAGGAA
TTCGATATCCTTTGGGAGTGTGACTGCCGCAAGTACCTAAAGCGTGCCAACGAAGACTTCCAGCTCGAGGGTGCC
AACCCCTCCGCTGAGGACGCTGATGAGGATGGTGGCGAGGGTGAGGCCACTATGGTCCACGATATCGAGGACCAG
TTCCGTCTGGTCTGGCTCAAGGTCGAGGACGGCGCGAAGCCCTCCAAGGAAAGCTACAAGACCCACATCAAGTCT
TACCTCAAGAAGCTCCACAAGAATGCCGCGCCCAAGTTCGCTGAGGCTGGCACTCCTGAAGCCGCTGAAGCCGCC
GAGAAGGCCTGGAAGACCAAGGCCGCCGGCGCTATGAAGAAGATCCTTGCCAACTGGGACAACTACGATGTTCTC
ATGGGCCAGTCTATGGACGGCGATGCCATGCACGTCCTGATTGACTTCCGCGAGGATGGTGTTACCCCCTACGCT
ACTGTCTGGGCTGACGGTCTCAAGGCCGTCAAGGTCTAA
Transcript >Pro_DTO377G3_2|g893.t1
ATGATTATCTACACTGACATCGTTTCCGGTGACGAGATCGTCGCCGATACCTTTGACCTTGTCCCCAACAAGGAA
TTCGATATCCTTTGGGAGTGTGACTGCCGCAAGTACCTAAAGCGTGCCAACGAAGACTTCCAGCTCGAGGGTGCC
AACCCCTCCGCTGAGGACGCTGATGAGGATGGTGGCGAGGGTGAGGCCACTATGGTCCACGATATCGAGGACCAG
TTCCGTCTGGTCTGGCTCAAGGTCGAGGACGGCGCGAAGCCCTCCAAGGAAAGCTACAAGACCCACATCAAGTCT
TACCTCAAGAAGCTCCACAAGAATGCCGCGCCCAAGTTCGCTGAGGCTGGCACTCCTGAAGCCGCTGAAGCCGCC
GAGAAGGCCTGGAAGACCAAGGCCGCCGGCGCTATGAAGAAGATCCTTGCCAACTGGGACAACTACGATGTTCTC
ATGGGCCAGTCTATGGACGGCGATGCCATGCACGTCCTGATTGACTTCCGCGAGGATGGTGTTACCCCCTACGCT
ACTGTCTGGGCTGACGGTCTCAAGGCCGTCAAGGTCTAA
Gene >Pro_DTO377G3_2|g893.t1
ATGATTATCTACACTGTATGTTTGTCAATATCAGATCCTTGGATCTCTTCGTTCGCAGGTGAATCTCAACTGACA
ATATCCACTAGGACATCGTTTCCGGTGACGAGATCGTCGCCGATACCTTTGACCTTGTCCCCAACAAGGAATTCG
ATATCCTTTGGGAGTGTGACTGCCGCAAGTACCTAAAGCGTGCCAACGAAGACTTCCAGCTCGAGGGTGCCAACC
CCTCCGCTGAGGACGCTGATGAGGATGGTGGCGAGGGTGAGGCCACTATGGTCCACGATATCGAGGACCAGTTCC
GTCTGGTCTGGCTCAAGGTCGAGGACGGCGCGAAGCCCTCCAAGGAAAGCTACAAGACCCACATCAAGTGTATGC
TCACCATTTGGTCTTGACTTGGTCCACGCAAATTACTAACTTTCGTTCTTTAATTCAGCTTACCTCAAGAAGCTC
CACAAGAATGCCGCGCCCAAGTTCGCTGAGGCTGGCACTCCTGAAGCCGCTGAAGCCGCCGAGAAGGCCTGGAAG
ACCAAGGCCGCCGGCGCTATGAAGAAGATCCTTGCCAACTGGGACAACTACGATGTTCTCATGGGCCAGTCTATG
GACGGCGATGCCATGTATGTCCCCATATTATGACCTTTTTCTTGAAATCTTAAGCTGACCGTTCCCAGGCACGTC
CTGATTGACTTCCGCGAGGATGGTGTTACCCCCTACGCTACTGTCTGGGCTGACGGTCTCAAGGCCGTCAAGGTC
TAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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