© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g8903.t1 |
| Gene name | |
| Location | scaffold_38:153191..154194 |
| Strand | - |
| Gene length (bp) | 1003 |
| Transcript length (bp) | 588 |
| Coding sequence length (bp) | 588 |
| Protein length (aa) | 196 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01253 | SUI1 | Translation initiation factor SUI1 | 8.8E-23 | 97 | 172 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006413 | translational initiation | Yes |
| GO:0003743 | translation initiation factor activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:0090079 | translation regulator activity, nucleic acid binding | No |
| GO:0008135 | translation factor activity, RNA binding | No |
| GO:0045182 | translation regulator activity | No |
| GO:0009987 | cellular process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g8903.t1 MAEVETAPVVQARHVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNESDLWDKLYSEDALNANLSTLSVSAQERAAK DAAKKEAKAAASEARDSERKAASKIQIKRVERNKRKYVTVVIGLEVFGLENKKIAKDLGKKFATGSSVTRSPAGV EEITVQGDVSDDLHDWLLEVHGKKIPASNIELIEDKKKKKSEGPV* |
| Coding | >Pro_DTO377G3_2|g8903.t1 ATGGCTGAGGTAGAAACAGCCCCAGTTGTACAGGCTAGACATGTTGTGTACTGTGGAGTCTGCACATTACCCCCC GAGTACTGCGAGTTTGGAGGTACCGCTAAGAAATGCGAAGAATGGCTCAAAGATAACGAGTCGGATCTATGGGAC AAACTATACTCTGAAGATGCCCTGAATGCCAACCTCTCCACCCTATCCGTCTCGGCACAAGAACGCGCCGCTAAA GACGCCGCTAAGAAAGAGGCCAAAGCTGCCGCCAGCGAGGCACGCGATAGCGAGCGCAAGGCCGCTTCCAAGATT CAGATCAAACGTGTCGAGCGGAACAAGCGCAAGTACGTGACGGTCGTGATCGGCCTGGAGGTCTTCGGATTGGAG AACAAGAAGATCGCAAAGGACCTGGGCAAGAAATTTGCTACGGGTTCCTCTGTGACCCGCTCGCCTGCGGGCGTT GAGGAGATCACCGTCCAGGGTGATGTCAGTGATGACCTGCATGATTGGCTCCTCGAGGTCCACGGCAAGAAAATC CCCGCGTCTAATATCGAACTGATTGAAGACAAGAAGAAGAAGAAGAGCGAGGGCCCGGTATAA |
| Transcript | >Pro_DTO377G3_2|g8903.t1 ATGGCTGAGGTAGAAACAGCCCCAGTTGTACAGGCTAGACATGTTGTGTACTGTGGAGTCTGCACATTACCCCCC GAGTACTGCGAGTTTGGAGGTACCGCTAAGAAATGCGAAGAATGGCTCAAAGATAACGAGTCGGATCTATGGGAC AAACTATACTCTGAAGATGCCCTGAATGCCAACCTCTCCACCCTATCCGTCTCGGCACAAGAACGCGCCGCTAAA GACGCCGCTAAGAAAGAGGCCAAAGCTGCCGCCAGCGAGGCACGCGATAGCGAGCGCAAGGCCGCTTCCAAGATT CAGATCAAACGTGTCGAGCGGAACAAGCGCAAGTACGTGACGGTCGTGATCGGCCTGGAGGTCTTCGGATTGGAG AACAAGAAGATCGCAAAGGACCTGGGCAAGAAATTTGCTACGGGTTCCTCTGTGACCCGCTCGCCTGCGGGCGTT GAGGAGATCACCGTCCAGGGTGATGTCAGTGATGACCTGCATGATTGGCTCCTCGAGGTCCACGGCAAGAAAATC CCCGCGTCTAATATCGAACTGATTGAAGACAAGAAGAAGAAGAAGAGCGAGGGCCCGGTATAA |
| Gene | >Pro_DTO377G3_2|g8903.t1 ATGGCTGAGGTAGAAACAGCCCCAGTTGTACAGGCTAGACATGTTGTGTACTGTGGAGGTGAGGACCCCCGTGGC GCAAAACACAACCCCAATTCGTTTGAGAATATAGCGCTGACGGAATCGATCATAGTCTGCACATTACCCCCCGAG GTATGACATTTGAGTTCCTCCCAAAATCCCCCAATTTCCAGTCACCCAGAAGTGAAAACTCAGCCTTTTCCCCGC TCTGGACCCTGGCTCTTAGCTCTTATCTGGGGACCCCGGCTGCGTCGTGCGTGGCATAACTCCCAGCCACTGAAA AGCGCCCACCGAGCCTGCGTGCATTGCCTTTTGAACTATACTCTCATTGGAGATCTGACATGTTTCTGACGTGCG GGGCTTTTGTCTAGTACTGCGAGTTTGGAGGTACCGCTAAGAAATGCGAAGAATGGCTCAAAGATAACGAGTCGG ATCTATGGGACAAACTATACTCTGAAGGTACGAAGCTCCCACGCTACTTGACTGGCTTTACCTGCATCGGGCGAT CCGCAAGCCCGGAAAGGGAAACACCGACATCCTAACACTGGGTTTCTTTCTATCAGATGCCCTGAATGCCAACCT CTCCACCCTATCCGTCTCGGCACAAGAACGCGCCGCTAAAGACGCCGCTAAGAAAGAGGCCAAAGCTGCCGCCAG CGAGGCACGCGATAGCGAGCGCAAGGCCGCTTCCAAGATTCAGATCAAACGTGTCGAGCGGAACAAGCGCAAGTA CGTGACGGTCGTGATCGGCCTGGAGGTCTTCGGATTGGAGAACAAGAAGATCGCAAAGGACCTGGGCAAGAAATT TGCTACGGGTTCCTCTGTGACCCGCTCGCCTGCGGGCGTTGAGGAGATCACCGTCCAGGGTGATGTCAGTGATGA CCTGCATGATTGGCTCCTCGAGGTCCACGGCAAGAAAATCCCCGCGTCTAATATCGAACTGATTGAAGACAAGAA GAAGAAGAAGAGCGAGGGCCCGGTATAA |