Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8868.t1
Gene name
Locationscaffold_38:57140..58646
Strand+
Gene length (bp)1506
Transcript length (bp)1506
Coding sequence length (bp)1506
Protein length (aa) 502

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00743 FMO-like Flavin-binding monooxygenase-like 6.2E-17 15 353
PF13738 Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase 2.6E-14 16 239
PF07992 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase 2.2E-09 13 219
PF13450 NAD_binding_8 NAD(P)-binding Rossmann-like domain 6.6E-08 17 65
PF13434 Lys_Orn_oxgnase L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase 4.9E-05 91 216

GO

GO Term Description Terminal node
GO:0004499 N,N-dimethylaniline monooxygenase activity Yes
GO:0016491 oxidoreductase activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0050661 NADP binding Yes
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:0004497 monooxygenase activity No
GO:0000166 nucleotide binding No
GO:0036094 small molecule binding No
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No
GO:1901265 nucleoside phosphate binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 49.46 29.51 69.40
5d_25C Five days - 25 degrees Celsius 45.31 26.69 63.93
7d_25C Seven days - 25 degrees Celsius 40.18 23.39 56.96
10d_25C Ten days - 25 degrees Celsius 45.34 26.80 63.89
7d_15C Seven days - 15 degrees Celsius 49.18 29.09 69.26
7d_30C Seven days - 30 degrees Celsius 35.70 20.43 50.96

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.777562 no
3d_25C 7d_25C 0.424406 no
3d_25C 7d_15C 0.988207 no
3d_25C 7d_30C 0.166610 no
3d_25C 10d_25C 0.781771 no
5d_25C 7d_25C 0.688080 no
5d_25C 7d_15C 0.798258 no
5d_25C 7d_30C 0.354705 no
5d_25C 10d_25C 0.998612 no
7d_25C 7d_15C 0.448193 no
7d_25C 7d_30C 0.698271 no
7d_25C 10d_25C 0.684335 no
7d_15C 7d_30C 0.181081 no
7d_15C 10d_25C 0.796226 no
7d_30C 10d_25C 0.357538 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8868.t1
MSGLDETNEARHFDVIIVGAGISGVNAAYRVQDQLPGYSYTILEARADLGGTWDLFNYPGIRSDSDLFTFGFQFN
PWTLDNPIAEGSAIKQYVRDTATKFGIDKHILYNHRVSSADWSSDKNIWSLAVDHNDSEHTYTARYVIFGTGYYN
YKDPLKADIPGLDAFQGQVIHPQFWPEDLQYKDKTIVIIGSGATAITLLPNLADDAARVTMLQRSPTYILSVPNR
SSNRWLSYILSNALYLRLQRMISIYTTRYFFLFCQRFPNFSRWLLKLNVRKQLPSHIPYDPHFKPKYNPWDQRLC
VCPDGDLFRSLRQGKADVKTDTIREVTKNGIILNSGEQLDADIIITATGLRLQIVGGAALSVDGKKIDVGGKYLW
NGVMLQDMPNAAFVIGYTNASWTLGADATAHLVCRLLKELESRKLVAAVPRLKEKDAATIQDRPLLNIKATYVSL
ADRILPRAADRGPWRPRDNYLSDLKFAQSGDIETGMEFVQGPNLRLRPKMS*
Coding >Pro_DTO377G3_2|g8868.t1
ATGAGTGGACTCGATGAAACAAACGAAGCTAGGCACTTCGATGTCATCATCGTCGGCGCGGGTATCTCCGGCGTC
AATGCCGCCTACCGCGTCCAAGACCAACTCCCCGGCTACAGCTACACCATCCTAGAAGCTCGCGCCGATCTAGGT
GGCACCTGGGATCTCTTTAATTATCCTGGTATCCGTTCCGACTCCGACCTTTTCACCTTCGGCTTCCAATTCAAT
CCCTGGACCCTCGATAACCCCATCGCAGAGGGTTCTGCCATCAAGCAGTACGTGCGCGATACCGCGACCAAATTT
GGCATCGACAAACACATCCTCTACAACCATCGTGTGTCATCGGCAGACTGGTCCTCCGATAAAAACATCTGGTCG
CTCGCCGTCGACCACAATGACTCCGAACACACATACACCGCCCGCTATGTCATCTTTGGCACGGGTTACTACAAC
TACAAGGATCCCCTGAAAGCTGACATTCCCGGCCTGGACGCCTTCCAGGGCCAGGTCATCCACCCACAGTTCTGG
CCCGAAGACTTGCAGTATAAGGACAAGACGATCGTTATCATCGGCTCGGGCGCGACCGCCATCACCCTCCTCCCC
AATCTCGCCGACGATGCCGCCCGTGTCACAATGCTCCAGCGCAGCCCTACCTACATCCTCTCCGTCCCAAACCGC
TCCAGCAACCGATGGCTCTCCTACATCCTCTCCAATGCCCTGTATCTCAGGTTGCAACGCATGATCTCGATCTAT
ACAACCCGCTATTTCTTCCTCTTCTGCCAGCGCTTCCCGAATTTCTCCCGCTGGTTGCTCAAGTTGAATGTGCGC
AAGCAACTGCCCAGCCATATCCCCTATGACCCGCATTTCAAGCCCAAATACAACCCCTGGGACCAACGATTGTGT
GTTTGTCCCGATGGGGATCTGTTCCGCAGTCTCCGGCAGGGCAAGGCGGATGTCAAGACCGATACTATTCGAGAG
GTTACGAAGAATGGTATTATCTTGAATTCGGGTGAGCAGCTTGACGCAGATATTATTATTACTGCTACTGGCTTG
CGATTGCAGATTGTAGGTGGCGCGGCGCTGTCTGTGGACGGGAAGAAGATCGACGTGGGTGGTAAATATCTGTGG
AATGGAGTCATGCTCCAGGATATGCCTAATGCCGCTTTCGTTATTGGGTATACCAATGCCTCATGGACACTCGGT
GCGGATGCTACGGCGCATTTGGTTTGTCGCCTGCTCAAGGAGCTTGAGTCGCGAAAGTTGGTCGCTGCTGTTCCT
CGGCTGAAGGAGAAGGATGCAGCTACGATCCAGGATCGTCCTCTCTTGAACATCAAGGCGACTTATGTGTCGCTT
GCTGATCGGATTTTACCCAGGGCTGCGGACCGTGGTCCGTGGCGCCCGCGTGATAACTACTTGAGCGACTTGAAG
TTCGCTCAGAGTGGTGATATTGAGACCGGAATGGAGTTCGTGCAAGGACCGAATCTGCGGTTACGTCCGAAGATG
TCGTGA
Transcript >Pro_DTO377G3_2|g8868.t1
ATGAGTGGACTCGATGAAACAAACGAAGCTAGGCACTTCGATGTCATCATCGTCGGCGCGGGTATCTCCGGCGTC
AATGCCGCCTACCGCGTCCAAGACCAACTCCCCGGCTACAGCTACACCATCCTAGAAGCTCGCGCCGATCTAGGT
GGCACCTGGGATCTCTTTAATTATCCTGGTATCCGTTCCGACTCCGACCTTTTCACCTTCGGCTTCCAATTCAAT
CCCTGGACCCTCGATAACCCCATCGCAGAGGGTTCTGCCATCAAGCAGTACGTGCGCGATACCGCGACCAAATTT
GGCATCGACAAACACATCCTCTACAACCATCGTGTGTCATCGGCAGACTGGTCCTCCGATAAAAACATCTGGTCG
CTCGCCGTCGACCACAATGACTCCGAACACACATACACCGCCCGCTATGTCATCTTTGGCACGGGTTACTACAAC
TACAAGGATCCCCTGAAAGCTGACATTCCCGGCCTGGACGCCTTCCAGGGCCAGGTCATCCACCCACAGTTCTGG
CCCGAAGACTTGCAGTATAAGGACAAGACGATCGTTATCATCGGCTCGGGCGCGACCGCCATCACCCTCCTCCCC
AATCTCGCCGACGATGCCGCCCGTGTCACAATGCTCCAGCGCAGCCCTACCTACATCCTCTCCGTCCCAAACCGC
TCCAGCAACCGATGGCTCTCCTACATCCTCTCCAATGCCCTGTATCTCAGGTTGCAACGCATGATCTCGATCTAT
ACAACCCGCTATTTCTTCCTCTTCTGCCAGCGCTTCCCGAATTTCTCCCGCTGGTTGCTCAAGTTGAATGTGCGC
AAGCAACTGCCCAGCCATATCCCCTATGACCCGCATTTCAAGCCCAAATACAACCCCTGGGACCAACGATTGTGT
GTTTGTCCCGATGGGGATCTGTTCCGCAGTCTCCGGCAGGGCAAGGCGGATGTCAAGACCGATACTATTCGAGAG
GTTACGAAGAATGGTATTATCTTGAATTCGGGTGAGCAGCTTGACGCAGATATTATTATTACTGCTACTGGCTTG
CGATTGCAGATTGTAGGTGGCGCGGCGCTGTCTGTGGACGGGAAGAAGATCGACGTGGGTGGTAAATATCTGTGG
AATGGAGTCATGCTCCAGGATATGCCTAATGCCGCTTTCGTTATTGGGTATACCAATGCCTCATGGACACTCGGT
GCGGATGCTACGGCGCATTTGGTTTGTCGCCTGCTCAAGGAGCTTGAGTCGCGAAAGTTGGTCGCTGCTGTTCCT
CGGCTGAAGGAGAAGGATGCAGCTACGATCCAGGATCGTCCTCTCTTGAACATCAAGGCGACTTATGTGTCGCTT
GCTGATCGGATTTTACCCAGGGCTGCGGACCGTGGTCCGTGGCGCCCGCGTGATAACTACTTGAGCGACTTGAAG
TTCGCTCAGAGTGGTGATATTGAGACCGGAATGGAGTTCGTGCAAGGACCGAATCTGCGGTTACGTCCGAAGATG
TCGTGA
Gene >Pro_DTO377G3_2|g8868.t1
ATGAGTGGACTCGATGAAACAAACGAAGCTAGGCACTTCGATGTCATCATCGTCGGCGCGGGTATCTCCGGCGTC
AATGCCGCCTACCGCGTCCAAGACCAACTCCCCGGCTACAGCTACACCATCCTAGAAGCTCGCGCCGATCTAGGT
GGCACCTGGGATCTCTTTAATTATCCTGGTATCCGTTCCGACTCCGACCTTTTCACCTTCGGCTTCCAATTCAAT
CCCTGGACCCTCGATAACCCCATCGCAGAGGGTTCTGCCATCAAGCAGTACGTGCGCGATACCGCGACCAAATTT
GGCATCGACAAACACATCCTCTACAACCATCGTGTGTCATCGGCAGACTGGTCCTCCGATAAAAACATCTGGTCG
CTCGCCGTCGACCACAATGACTCCGAACACACATACACCGCCCGCTATGTCATCTTTGGCACGGGTTACTACAAC
TACAAGGATCCCCTGAAAGCTGACATTCCCGGCCTGGACGCCTTCCAGGGCCAGGTCATCCACCCACAGTTCTGG
CCCGAAGACTTGCAGTATAAGGACAAGACGATCGTTATCATCGGCTCGGGCGCGACCGCCATCACCCTCCTCCCC
AATCTCGCCGACGATGCCGCCCGTGTCACAATGCTCCAGCGCAGCCCTACCTACATCCTCTCCGTCCCAAACCGC
TCCAGCAACCGATGGCTCTCCTACATCCTCTCCAATGCCCTGTATCTCAGGTTGCAACGCATGATCTCGATCTAT
ACAACCCGCTATTTCTTCCTCTTCTGCCAGCGCTTCCCGAATTTCTCCCGCTGGTTGCTCAAGTTGAATGTGCGC
AAGCAACTGCCCAGCCATATCCCCTATGACCCGCATTTCAAGCCCAAATACAACCCCTGGGACCAACGATTGTGT
GTTTGTCCCGATGGGGATCTGTTCCGCAGTCTCCGGCAGGGCAAGGCGGATGTCAAGACCGATACTATTCGAGAG
GTTACGAAGAATGGTATTATCTTGAATTCGGGTGAGCAGCTTGACGCAGATATTATTATTACTGCTACTGGCTTG
CGATTGCAGATTGTAGGTGGCGCGGCGCTGTCTGTGGACGGGAAGAAGATCGACGTGGGTGGTAAATATCTGTGG
AATGGAGTCATGCTCCAGGATATGCCTAATGCCGCTTTCGTTATTGGGTATACCAATGCCTCATGGACACTCGGT
GCGGATGCTACGGCGCATTTGGTTTGTCGCCTGCTCAAGGAGCTTGAGTCGCGAAAGTTGGTCGCTGCTGTTCCT
CGGCTGAAGGAGAAGGATGCAGCTACGATCCAGGATCGTCCTCTCTTGAACATCAAGGCGACTTATGTGTCGCTT
GCTGATCGGATTTTACCCAGGGCTGCGGACCGTGGTCCGTGGCGCCCGCGTGATAACTACTTGAGCGACTTGAAG
TTCGCTCAGAGTGGTGATATTGAGACCGGAATGGAGTTCGTGCAAGGACCGAATCTGCGGTTACGTCCGAAGATG
TCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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