Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8866.t1
Gene name
Locationscaffold_38:54117..55173
Strand+
Gene length (bp)1056
Transcript length (bp)1005
Coding sequence length (bp)1005
Protein length (aa) 335

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 8.8E-39 71 258
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.4E-26 79 261
PF08659 KR KR domain 1.6E-05 73 222

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8866.t1
MSTLNLIADYSQMVLSHLPGPTRHLFRNPTAQKAVGILAALTFLRATNDFFSRRTLQNWTSNQPWIPARELILLT
GGCSGIGKQVMEDLARTGVRVIILDINEPTFTLPANVTFYKANVSSSADIANVASTIRDNHGEPTVLINNAGVGH
EGAILDESEENIRQTFEVNTLSHFLMVKEFLPAMVKANHGHVVTIASMASFVALGEMVDYCCTKASALAFHEGLR
QELKYWYNAPSVRTSIIHPAWVRTPMIKMLTDNEAHFRESIMTTQVVSDAICKQILTQTSGQVLLPASKSVATLV
RAMPTWMQEGVRNFASGSLKKMCVLQTEEKAQAQ*
Coding >Pro_DTO377G3_2|g8866.t1
ATGTCTACCCTTAACCTCATCGCCGATTACTCCCAAATGGTTCTATCTCACCTTCCAGGACCCACCCGACATCTC
TTCCGCAACCCAACAGCCCAAAAGGCCGTCGGAATTCTCGCCGCCCTCACCTTCCTCCGCGCCACAAACGACTTC
TTTTCAAGACGCACCCTACAAAACTGGACTTCCAACCAACCATGGATCCCGGCACGCGAGCTCATCCTACTAACG
GGTGGCTGCAGCGGAATCGGCAAGCAGGTCATGGAAGACCTCGCGCGCACAGGCGTGCGCGTCATCATCCTCGAT
ATTAATGAGCCAACTTTCACACTGCCGGCTAACGTCACCTTCTACAAGGCGAATGTCAGTTCCTCGGCGGATATC
GCGAATGTCGCGAGCACGATCCGTGACAATCACGGCGAGCCCACGGTCTTGATTAATAACGCTGGCGTTGGACAC
GAGGGGGCAATCCTCGATGAATCCGAGGAGAATATCCGGCAGACTTTCGAGGTCAATACCCTCTCCCATTTCCTT
ATGGTTAAGGAGTTCTTGCCGGCTATGGTGAAGGCGAATCATGGTCATGTTGTCACTATTGCTAGTATGGCGAGC
TTCGTGGCTCTCGGTGAGATGGTGGATTATTGTTGCACCAAGGCCAGTGCGCTTGCTTTCCATGAGGGACTGCGG
CAGGAATTGAAGTATTGGTATAATGCGCCCAGTGTGCGCACTAGTATTATTCACCCTGCGTGGGTACGTACGCCT
ATGATCAAGATGCTCACAGACAACGAGGCGCACTTCAGAGAGTCTATCATGACCACCCAGGTCGTGTCTGACGCT
ATCTGTAAGCAAATCTTGACTCAGACTAGTGGCCAGGTTCTTCTGCCTGCCAGTAAGTCGGTGGCTACTTTGGTG
CGCGCTATGCCAACCTGGATGCAGGAGGGTGTGCGCAATTTCGCGTCGGGTTCCTTGAAGAAGATGTGTGTTCTG
CAGACAGAGGAGAAGGCCCAGGCGCAGTAG
Transcript >Pro_DTO377G3_2|g8866.t1
ATGTCTACCCTTAACCTCATCGCCGATTACTCCCAAATGGTTCTATCTCACCTTCCAGGACCCACCCGACATCTC
TTCCGCAACCCAACAGCCCAAAAGGCCGTCGGAATTCTCGCCGCCCTCACCTTCCTCCGCGCCACAAACGACTTC
TTTTCAAGACGCACCCTACAAAACTGGACTTCCAACCAACCATGGATCCCGGCACGCGAGCTCATCCTACTAACG
GGTGGCTGCAGCGGAATCGGCAAGCAGGTCATGGAAGACCTCGCGCGCACAGGCGTGCGCGTCATCATCCTCGAT
ATTAATGAGCCAACTTTCACACTGCCGGCTAACGTCACCTTCTACAAGGCGAATGTCAGTTCCTCGGCGGATATC
GCGAATGTCGCGAGCACGATCCGTGACAATCACGGCGAGCCCACGGTCTTGATTAATAACGCTGGCGTTGGACAC
GAGGGGGCAATCCTCGATGAATCCGAGGAGAATATCCGGCAGACTTTCGAGGTCAATACCCTCTCCCATTTCCTT
ATGGTTAAGGAGTTCTTGCCGGCTATGGTGAAGGCGAATCATGGTCATGTTGTCACTATTGCTAGTATGGCGAGC
TTCGTGGCTCTCGGTGAGATGGTGGATTATTGTTGCACCAAGGCCAGTGCGCTTGCTTTCCATGAGGGACTGCGG
CAGGAATTGAAGTATTGGTATAATGCGCCCAGTGTGCGCACTAGTATTATTCACCCTGCGTGGGTACGTACGCCT
ATGATCAAGATGCTCACAGACAACGAGGCGCACTTCAGAGAGTCTATCATGACCACCCAGGTCGTGTCTGACGCT
ATCTGTAAGCAAATCTTGACTCAGACTAGTGGCCAGGTTCTTCTGCCTGCCAGTAAGTCGGTGGCTACTTTGGTG
CGCGCTATGCCAACCTGGATGCAGGAGGGTGTGCGCAATTTCGCGTCGGGTTCCTTGAAGAAGATGTGTGTTCTG
CAGACAGAGGAGAAGGCCCAGGCGCAGTAG
Gene >Pro_DTO377G3_2|g8866.t1
ATGTCTACCCTTAACCTCATCGCCGATTACTCCCAAATGGTTCTATCTCACCTTCCAGGACCCACCCGACATCTC
TTCCGCAACCCAACAGCCCAAAAGGCCGTCGGAATTCTCGCCGCCCTCACCTTCCTCCGCGCCACAAACGACTTC
TTTTCAAGACGCACCCTACAAAACTGGACTTCCAACCAACCATGGATCCCGGCACGCGAGCTCATCCTACTAACG
GGTGGCTGCAGCGGAATCGGCAAGCAGGTCATGGAAGACCTCGCGCGCACAGGCGTGCGCGTCATCATCCTCGAT
ATTAATGAGCCAACTTTCACACTGCCGGCTAACGTCACCTTCTACAAGGCGAATGTCAGTTCCTCGGCGGATATC
GCGAATGTCGCGAGCACGATCCGTGACAATCACGGCGAGCCCACGGTCTTGATTAATAACGCTGGCGTTGGACAC
GAGGGGGCAATCCTCGATGAATCCGAGGAGAATATCCGGCAGACTTTCGAGGTCAATACCCTCTCCCATTTCCTT
ATGGTTAAGGAGTTCTTGCCGGCTATGGTGAAGGCGAATCATGGTCATGTTGTCACTATTGCTAGTATGGCGAGC
TTCGTGGCTCTCGGTGAGATGGTGGATTATTGTTGCACCAAGGCCAGTGCGCTTGCTTTCCATGAGGGACTGCGG
CAGGAATTGAAGTATTGGTATAATGCGCCCAGTGTGCGCACTAGGTGAGTTATTCTCGGGTATGTATCTGTAGAT
TTTGCTAATTATTGCTTTAGTATTATTCACCCTGCGTGGGTACGTACGCCTATGATCAAGATGCTCACAGACAAC
GAGGCGCACTTCAGAGAGTCTATCATGACCACCCAGGTCGTGTCTGACGCTATCTGTAAGCAAATCTTGACTCAG
ACTAGTGGCCAGGTTCTTCTGCCTGCCAGTAAGTCGGTGGCTACTTTGGTGCGCGCTATGCCAACCTGGATGCAG
GAGGGTGTGCGCAATTTCGCGTCGGGTTCCTTGAAGAAGATGTGTGTTCTGCAGACAGAGGAGAAGGCCCAGGCG
CAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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