Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g8857.t1
Gene name
Location	scaffold_38:29208..31013
Strand	+
Gene length (bp)	1805
Transcript length (bp)	1590
Coding sequence length (bp)	1590
Protein length (aa)	530

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03198	Glyco_hydro_72	Glucanosyltransferase	8.7E-129	15	321
PF07983	X8	X8 domain	1.7E-24	372	446

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 18	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	0.17	0.0	0.44
5d_25C	Five days - 25 degrees Celsius	0.10	0.0	0.29
7d_25C	Seven days - 25 degrees Celsius	0.27	0.0	0.67
10d_25C	Ten days - 25 degrees Celsius	0.10	0.0	0.31
7d_15C	Seven days - 15 degrees Celsius	0.66	0.0	1.39
7d_30C	Seven days - 30 degrees Celsius	0.27	0.0	0.63

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	1.0	no
3d_25C	7d_25C	1.0	no
3d_25C	7d_15C	1.0	no
3d_25C	7d_30C	1.0	no
3d_25C	10d_25C	1.0	no
5d_25C	7d_25C	1.0	no
5d_25C	7d_15C	1.0	no
5d_25C	7d_30C	1.0	no
5d_25C	10d_25C	1.0	no
7d_25C	7d_15C	1.0	no
7d_25C	7d_30C	1.0	no
7d_25C	10d_25C	1.0	no
7d_15C	7d_30C	1.0	no
7d_15C	10d_25C	1.0	no
7d_30C	10d_25C	1.0	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g8857.t1 MKFSLVALATLAGVAVADLDPIIIKGSKFFYSSNDTQFFMRGVAYQQESTSSSGYTDPLADATACARDVPIMAEL RTNVIRTYAINASADHSACMKLLSEAGIYVISDLSDPDLSIDRNDPSWTTNLFARYTSVVDELAQYNNTIGFFAG NEVSNTIATSDASAFVKAAVRDTKKYIKEKGYRSMGVGYATADVSDIRADMADYFDCGDAEDSIDFWGYNIYSWC GNSTYAKSKYQARTEEFANYSVPVFFAEYGCNEVTPREFTEVKALYGDTMAEVWSGGIVYMYFQEANNYGLVSVV DSTSVKTMSDFKYYSSQIANANPTGVNKASYTPTNTALQSCPTVGASWDAKSSPLPPAADSQLCECMYDASACVV AGSLASTKYANLFSTVCGYTDCSGLTANATTGEYGAYSMCSTKQQLAFALNKYYVEQDRAADACSFSGSATVKAS TKATGTCSTQIKEAGTAGTGTVTTENTATADSSSASSTASSSTSSSGAIRVHHSSSFGSFQVAAYIATALLAGVG MIAL*
Coding	>Pro_DTO377G3_2\|g8857.t1 ATGAAATTCTCCTTGGTGGCACTGGCAACCCTGGCTGGGGTTGCTGTTGCTGATTTGGATCCCATCATCATCAAG GGCTCCAAGTTCTTCTATTCTAGCAATGACACTCAGTTCTTTATGCGTGGAGTCGCCTATCAACAGGAAAGCACG AGTAGCAGCGGCTACACTGACCCTCTAGCCGATGCCACCGCGTGTGCGCGTGATGTTCCCATCATGGCTGAACTC CGCACCAATGTTATCCGTACCTATGCCATCAACGCCTCTGCTGACCACTCGGCATGTATGAAACTCTTGTCCGAG GCTGGTATTTACGTGATCTCCGATCTGTCAGACCCCGATCTATCGATCGATCGAAACGATCCTTCGTGGACAACC AATCTCTTTGCCCGATACACTAGTGTTGTTGATGAACTGGCCCAGTACAACAACACTATTGGTTTCTTTGCTGGA AATGAGGTTTCCAACACCATTGCTACTTCCGACGCCAGCGCTTTTGTCAAGGCTGCTGTTCGTGACACCAAGAAG TATATCAAGGAGAAGGGCTACCGATCTATGGGTGTTGGATATGCTACCGCCGATGTGTCCGACATCCGTGCGGAC ATGGCCGACTATTTCGACTGTGGAGATGCCGAAGATAGCATTGACTTCTGGGGATACAACATCTACTCGTGGTGC GGTAATTCGACCTACGCGAAATCTAAATACCAGGCTCGTACCGAAGAGTTCGCCAACTACTCCGTCCCTGTCTTC TTCGCCGAGTACGGTTGCAACGAGGTCACGCCCCGCGAGTTCACCGAGGTGAAGGCCCTCTATGGCGATACCATG GCGGAGGTCTGGTCTGGTGGTATTGTGTACATGTACTTCCAGGAGGCTAACAACTACGGTCTGGTCTCTGTCGTC GATAGCACCAGTGTCAAGACCATGTCCGACTTCAAATACTATTCCAGTCAGATCGCCAACGCCAACCCCACTGGT GTCAACAAGGCCTCCTACACTCCCACCAACACCGCCCTGCAAAGCTGCCCTACCGTCGGAGCCAGTTGGGACGCC AAATCCTCCCCTCTGCCCCCTGCCGCCGATTCCCAGCTGTGCGAGTGCATGTACGATGCCTCCGCGTGCGTTGTC GCCGGATCCCTCGCCTCGACGAAGTACGCCAACCTCTTCAGCACTGTCTGCGGCTACACCGACTGCAGCGGATTG ACAGCCAATGCTACCACCGGCGAGTACGGTGCTTATAGCATGTGTTCAACCAAGCAGCAGCTTGCCTTTGCCTTG AACAAGTACTATGTTGAGCAAGACCGTGCTGCGGATGCTTGCAGCTTCTCCGGGTCTGCAACCGTCAAGGCCTCT ACCAAGGCCACTGGCACTTGCTCTACACAGATAAAAGAGGCTGGAACCGCTGGAACCGGAACTGTTACTACCGAA AACACTGCAACCGCCGACTCCAGCTCTGCTTCCTCGACAGCCTCGTCGTCCACGTCTAGCAGCGGCGCCATCAGG GTGCACCACAGCTCATCCTTTGGCTCTTTCCAGGTGGCTGCTTACATTGCCACTGCACTCCTGGCGGGTGTTGGA ATGATCGCTCTGTAA
Transcript	>Pro_DTO377G3_2\|g8857.t1 ATGAAATTCTCCTTGGTGGCACTGGCAACCCTGGCTGGGGTTGCTGTTGCTGATTTGGATCCCATCATCATCAAG GGCTCCAAGTTCTTCTATTCTAGCAATGACACTCAGTTCTTTATGCGTGGAGTCGCCTATCAACAGGAAAGCACG AGTAGCAGCGGCTACACTGACCCTCTAGCCGATGCCACCGCGTGTGCGCGTGATGTTCCCATCATGGCTGAACTC CGCACCAATGTTATCCGTACCTATGCCATCAACGCCTCTGCTGACCACTCGGCATGTATGAAACTCTTGTCCGAG GCTGGTATTTACGTGATCTCCGATCTGTCAGACCCCGATCTATCGATCGATCGAAACGATCCTTCGTGGACAACC AATCTCTTTGCCCGATACACTAGTGTTGTTGATGAACTGGCCCAGTACAACAACACTATTGGTTTCTTTGCTGGA AATGAGGTTTCCAACACCATTGCTACTTCCGACGCCAGCGCTTTTGTCAAGGCTGCTGTTCGTGACACCAAGAAG TATATCAAGGAGAAGGGCTACCGATCTATGGGTGTTGGATATGCTACCGCCGATGTGTCCGACATCCGTGCGGAC ATGGCCGACTATTTCGACTGTGGAGATGCCGAAGATAGCATTGACTTCTGGGGATACAACATCTACTCGTGGTGC GGTAATTCGACCTACGCGAAATCTAAATACCAGGCTCGTACCGAAGAGTTCGCCAACTACTCCGTCCCTGTCTTC TTCGCCGAGTACGGTTGCAACGAGGTCACGCCCCGCGAGTTCACCGAGGTGAAGGCCCTCTATGGCGATACCATG GCGGAGGTCTGGTCTGGTGGTATTGTGTACATGTACTTCCAGGAGGCTAACAACTACGGTCTGGTCTCTGTCGTC GATAGCACCAGTGTCAAGACCATGTCCGACTTCAAATACTATTCCAGTCAGATCGCCAACGCCAACCCCACTGGT GTCAACAAGGCCTCCTACACTCCCACCAACACCGCCCTGCAAAGCTGCCCTACCGTCGGAGCCAGTTGGGACGCC AAATCCTCCCCTCTGCCCCCTGCCGCCGATTCCCAGCTGTGCGAGTGCATGTACGATGCCTCCGCGTGCGTTGTC GCCGGATCCCTCGCCTCGACGAAGTACGCCAACCTCTTCAGCACTGTCTGCGGCTACACCGACTGCAGCGGATTG ACAGCCAATGCTACCACCGGCGAGTACGGTGCTTATAGCATGTGTTCAACCAAGCAGCAGCTTGCCTTTGCCTTG AACAAGTACTATGTTGAGCAAGACCGTGCTGCGGATGCTTGCAGCTTCTCCGGGTCTGCAACCGTCAAGGCCTCT ACCAAGGCCACTGGCACTTGCTCTACACAGATAAAAGAGGCTGGAACCGCTGGAACCGGAACTGTTACTACCGAA AACACTGCAACCGCCGACTCCAGCTCTGCTTCCTCGACAGCCTCGTCGTCCACGTCTAGCAGCGGCGCCATCAGG GTGCACCACAGCTCATCCTTTGGCTCTTTCCAGGTGGCTGCTTACATTGCCACTGCACTCCTGGCGGGTGTTGGA ATGATCGCTCTGTAA
Gene	>Pro_DTO377G3_2\|g8857.t1 ATGAAATTCTCCTTGGTGGCACTGGCAACCCTGGCTGGGGTTGCTGTTGCTGATTTGGATCCCATCATCATCAAG GTACTGTCTTTATACATGTTACATGTATTCAAACCGTGGTGTACTAAAACTGTCAATAGGGCTCCAAGTTCTTCT ATTCTAGCAATGACACTCAGTTGTAAGTCCGAATGTATCGATGTATCTCAAATTCGGTGACTGACAAGAACAGCT TTATGCGTGGAGTCGCCTATCAACGTAGGTCGTTTATGCAGTCACCTCAACATCCCGACTAACCTGTTTGCAGAG GAAAGCACGAGTAGCAGCGGCTACACTGACCCTCTAGCCGATGCCACCGCGTGTGCGCGTGATGTTCCCATCATG GCTGAACTCCGCACCAATGTTATCCGTACCTATGCCATCAACGCCTCTGCTGACCACTCGGCATGTATGAAACTC TTGTCCGAGGCTGGTATTTACGTGATCTCCGATCTGTCAGACCCCGATCTATCGATCGATCGAAACGATCCTTCG TGGACAACCAATCTCTTTGCCCGATACACTAGTGTTGTTGATGAACTGGCCCAGTACAACAACACTATTGGTTTC TTTGCTGGAAATGAGGTTTCCAACACCATTGCTACTTCCGACGCCAGCGCTTTTGTCAAGGCTGCTGTTCGTGAC ACCAAGAAGTATATCAAGGAGAAGGGCTACCGATCTATGGGTGTTGGATATGCTACCGCCGATGTGTCCGACATC CGTGCGGACATGGCCGACTATTTCGACTGTGGAGATGCCGAAGATAGCATTGACTTCTGGGGATACAACATCTAC TCGTGGTGCGGTAATTCGACCTACGCGAAATCTAAATACCAGGCTCGTACCGAAGAGTTCGCCAACTACTCCGTC CCTGTCTTCTTCGCCGAGTACGGTTGCAACGAGGTCACGCCCCGCGAGTTCACCGAGGTGAAGGCCCTCTATGGC GATACCATGGCGGAGGTCTGGTCTGGTGGTATTGTGTACATGTACTTCCAGGAGGCTAACAACTACGGTAAGGAA ATGATTCCTTTCCCACATATATGTTCGGGTAACTGATCAGACTTTTAGGTCTGGTCTCTGTCGTCGATAGCACCA GTGTCAAGACCATGTCCGACTTCAAATACTATTCCAGTCAGATCGCCAACGCCAACCCCACTGGTGTCAACAAGG CCTCCTACACTCCCACCAACACCGCCCTGCAAAGCTGCCCTACCGTCGGAGCCAGTTGGGACGCCAAATCCTCCC CTCTGCCCCCTGCCGCCGATTCCCAGCTGTGCGAGTGCATGTACGATGCCTCCGCGTGCGTTGTCGCCGGATCCC TCGCCTCGACGAAGTACGCCAACCTCTTCAGCACTGTCTGCGGCTACACCGACTGCAGCGGATTGACAGCCAATG CTACCACCGGCGAGTACGGTGCTTATAGCATGTGTTCAACCAAGCAGCAGCTTGCCTTTGCCTTGAACAAGTACT ATGTTGAGCAAGACCGTGCTGCGGATGCTTGCAGCTTCTCCGGGTCTGCAACCGTCAAGGCCTCTACCAAGGCCA CTGGCACTTGCTCTACACAGATAAAAGAGGCTGGAACCGCTGGAACCGGAACTGTTACTACCGAAAACACTGCAA CCGCCGACTCCAGCTCTGCTTCCTCGACAGCCTCGTCGTCCACGTCTAGCAGCGGCGCCATCAGGGTGCACCACA GCTCATCCTTTGGCTCTTTCCAGGTGGCTGCTTACATTGCCACTGCACTCCTGGCGGGTGTTGGAATGATCGCTC TGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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