Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8845.t1
Gene name
Locationscaffold_37:212239..214733
Strand+
Gene length (bp)2494
Transcript length (bp)2226
Coding sequence length (bp)2226
Protein length (aa) 742

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 1.0E-03 388 422
PF00400 WD40 WD domain, G-beta repeat 3.6E-05 444 494
PF00400 WD40 WD domain, G-beta repeat 4.4E-07 498 535
PF00400 WD40 WD domain, G-beta repeat 2.0E-06 542 577
PF00400 WD40 WD domain, G-beta repeat 2.6E-05 583 620
PF00400 WD40 WD domain, G-beta repeat 4.3E-08 625 663
PF04494 TFIID_NTD2 WD40 associated region in TFIID subunit, NTD2 domain 3.9E-39 101 230

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8845.t1
METHGKDFEPRRYPQPTLPAQMIKKRHEPVAADMTPAQYVPCPPIAKPSQALTSEQARERDLAVIDYLAKKGYSR
TEAMLRMESANQEIDGRPLPQLGEDSRPKTRQGFDLLKNWVEENLDLYKPELRRVLWPLFVYSFFNMVTSFYPQD
AKSFFETNKNMFLPEHTDDVRHFEPISLPEHLQDNSVAKLYRNNKYRVVLSNPAYTNLLQFLESKDKEGGSVMNA
ILSSFCSVKTLDRAADDRFSFAAMLNQISADQTFPAEDEGIPGHHPGSAYTGDNPAMAGTLPRLKLGRLPMEQLL
EEDVRAELAEEDAKQPPVAGRNTLIQEFDQMIKNEDDDEAPSRADIPFPPSTARDVQIEVKKVMEHRDRFEIKAR
TGGVGPGLSVCMFTFHNTYDGVTCMDFSDDSQIVAVGFQQSYIRIWSLDGTNIQAADPEFDNSPPASSRRLIGHS
GPVTAVAFQPCATAREGISEDDKVPTNARWLLSSSMDKTVRLWSLDSWQCMVVYKGHDRPVWDLSWGPFGHYFVS
GGSDRTARLWVSDQIRQQRIFVGHDQDVDVVCFHPNSAYIFTASSDHTVRMWAVSTGNAVRMFTGHTGSITAMEC
SRDGKLLASADDQGCIILWDLAPGRLLKRMRGHGKGGIWSVSWSVESTVLVSGGADGTVRVWDVAGSQETTQGGR
ILNESGTGTRLDAAANPSTSQTKKKKGKDVVVTADQISAFPTKKSPVYRVKFTNMNLVVAGGAYLP*
Coding >Pro_DTO377G3_2|g8845.t1
ATGGAAACTCACGGCAAGGATTTCGAGCCTCGCCGGTACCCACAACCGACCTTACCGGCCCAGATGATCAAGAAA
AGACATGAGCCGGTGGCGGCTGATATGACTCCGGCACAATATGTGCCGTGTCCACCCATCGCAAAGCCTTCACAA
GCCCTCACTTCTGAGCAGGCACGCGAACGTGATTTGGCAGTTATTGATTATTTGGCCAAGAAGGGCTACAGCCGT
ACAGAGGCAATGTTGCGCATGGAATCTGCCAACCAGGAGATTGATGGGCGTCCGCTCCCTCAGCTGGGGGAAGAT
TCCCGTCCCAAGACTCGACAAGGGTTTGATTTACTGAAGAATTGGGTTGAGGAAAATCTTGATCTGTACAAGCCT
GAACTTCGGCGTGTTCTATGGCCGCTGTTCGTCTATTCCTTTTTCAATATGGTCACTTCCTTCTATCCTCAGGAT
GCGAAGTCATTTTTCGAAACCAACAAGAACATGTTCCTTCCCGAGCATACCGATGACGTCCGCCACTTCGAGCCT
ATCAGCTTACCGGAGCACCTGCAAGATAACTCCGTTGCTAAGCTTTATCGAAACAACAAATACCGCGTTGTGTTA
AGCAACCCTGCTTACACCAATCTTCTCCAGTTCCTGGAGAGCAAGGACAAGGAGGGGGGTTCTGTCATGAACGCA
ATTCTCAGCAGCTTTTGCTCGGTGAAGACTTTGGACCGAGCAGCAGATGACCGATTCAGTTTCGCTGCCATGTTG
AACCAGATCAGTGCAGACCAGACCTTCCCGGCTGAGGATGAAGGCATTCCGGGACACCACCCCGGCTCGGCTTAC
ACCGGTGACAACCCGGCCATGGCCGGCACACTTCCTCGCCTGAAACTCGGAAGACTCCCTATGGAACAGCTTCTA
GAGGAGGATGTGCGGGCTGAATTAGCCGAGGAAGATGCGAAACAACCTCCTGTCGCTGGCCGTAACACGCTCATT
CAAGAGTTCGACCAAATGATTAAGAATGAAGATGACGACGAAGCACCTAGTCGTGCAGATATTCCTTTCCCTCCG
TCCACTGCTCGTGACGTTCAAATTGAGGTGAAGAAAGTCATGGAACACCGTGATCGGTTCGAGATCAAGGCTCGC
ACAGGTGGTGTCGGTCCTGGACTTAGTGTGTGCATGTTCACATTCCACAACACTTATGATGGCGTCACTTGCATG
GACTTTTCAGATGACAGCCAGATTGTTGCCGTCGGATTCCAGCAGTCGTATATCCGGATTTGGAGCCTCGATGGC
ACGAACATTCAAGCTGCTGACCCTGAGTTTGATAACTCACCACCTGCCAGTTCGCGCCGTCTTATCGGTCATTCC
GGTCCCGTCACTGCTGTTGCATTTCAGCCCTGCGCCACTGCTCGCGAGGGCATTTCGGAGGATGACAAGGTTCCA
ACCAATGCACGCTGGTTGCTTTCATCATCCATGGACAAAACAGTTCGCCTTTGGTCCCTTGATAGCTGGCAATGT
ATGGTCGTCTACAAAGGCCACGACCGCCCTGTCTGGGACCTAAGCTGGGGGCCCTTCGGTCACTACTTTGTCTCC
GGTGGATCTGATAGGACCGCCCGTTTGTGGGTGAGTGACCAAATCCGCCAGCAGCGTATTTTTGTCGGTCATGAC
CAGGACGTGGATGTCGTCTGCTTCCACCCCAACTCGGCATACATTTTCACCGCCAGCTCTGATCACACTGTCCGT
ATGTGGGCTGTCTCGACTGGTAATGCTGTCCGCATGTTTACTGGCCACACTGGTAGTATCACCGCGATGGAGTGC
AGCCGCGATGGAAAGCTTCTGGCATCCGCCGACGACCAGGGCTGCATCATCTTGTGGGATCTAGCTCCTGGTAGA
CTGCTGAAGCGCATGCGTGGCCACGGTAAGGGTGGAATCTGGTCTGTCAGCTGGAGTGTGGAGTCCACAGTGTTG
GTCTCCGGTGGAGCCGATGGAACCGTGCGAGTCTGGGATGTTGCTGGTTCCCAGGAAACCACTCAGGGTGGCCGT
ATCCTCAATGAATCAGGCACTGGAACCAGACTGGATGCAGCCGCAAACCCCTCGACAAGCCAGACCAAGAAAAAG
AAGGGAAAAGATGTTGTTGTCACCGCCGACCAAATCAGCGCGTTCCCGACTAAGAAGTCTCCTGTCTATAGGGTC
AAGTTCACCAATATGAATCTGGTGGTTGCTGGTGGTGCCTATTTGCCTTAA
Transcript >Pro_DTO377G3_2|g8845.t1
ATGGAAACTCACGGCAAGGATTTCGAGCCTCGCCGGTACCCACAACCGACCTTACCGGCCCAGATGATCAAGAAA
AGACATGAGCCGGTGGCGGCTGATATGACTCCGGCACAATATGTGCCGTGTCCACCCATCGCAAAGCCTTCACAA
GCCCTCACTTCTGAGCAGGCACGCGAACGTGATTTGGCAGTTATTGATTATTTGGCCAAGAAGGGCTACAGCCGT
ACAGAGGCAATGTTGCGCATGGAATCTGCCAACCAGGAGATTGATGGGCGTCCGCTCCCTCAGCTGGGGGAAGAT
TCCCGTCCCAAGACTCGACAAGGGTTTGATTTACTGAAGAATTGGGTTGAGGAAAATCTTGATCTGTACAAGCCT
GAACTTCGGCGTGTTCTATGGCCGCTGTTCGTCTATTCCTTTTTCAATATGGTCACTTCCTTCTATCCTCAGGAT
GCGAAGTCATTTTTCGAAACCAACAAGAACATGTTCCTTCCCGAGCATACCGATGACGTCCGCCACTTCGAGCCT
ATCAGCTTACCGGAGCACCTGCAAGATAACTCCGTTGCTAAGCTTTATCGAAACAACAAATACCGCGTTGTGTTA
AGCAACCCTGCTTACACCAATCTTCTCCAGTTCCTGGAGAGCAAGGACAAGGAGGGGGGTTCTGTCATGAACGCA
ATTCTCAGCAGCTTTTGCTCGGTGAAGACTTTGGACCGAGCAGCAGATGACCGATTCAGTTTCGCTGCCATGTTG
AACCAGATCAGTGCAGACCAGACCTTCCCGGCTGAGGATGAAGGCATTCCGGGACACCACCCCGGCTCGGCTTAC
ACCGGTGACAACCCGGCCATGGCCGGCACACTTCCTCGCCTGAAACTCGGAAGACTCCCTATGGAACAGCTTCTA
GAGGAGGATGTGCGGGCTGAATTAGCCGAGGAAGATGCGAAACAACCTCCTGTCGCTGGCCGTAACACGCTCATT
CAAGAGTTCGACCAAATGATTAAGAATGAAGATGACGACGAAGCACCTAGTCGTGCAGATATTCCTTTCCCTCCG
TCCACTGCTCGTGACGTTCAAATTGAGGTGAAGAAAGTCATGGAACACCGTGATCGGTTCGAGATCAAGGCTCGC
ACAGGTGGTGTCGGTCCTGGACTTAGTGTGTGCATGTTCACATTCCACAACACTTATGATGGCGTCACTTGCATG
GACTTTTCAGATGACAGCCAGATTGTTGCCGTCGGATTCCAGCAGTCGTATATCCGGATTTGGAGCCTCGATGGC
ACGAACATTCAAGCTGCTGACCCTGAGTTTGATAACTCACCACCTGCCAGTTCGCGCCGTCTTATCGGTCATTCC
GGTCCCGTCACTGCTGTTGCATTTCAGCCCTGCGCCACTGCTCGCGAGGGCATTTCGGAGGATGACAAGGTTCCA
ACCAATGCACGCTGGTTGCTTTCATCATCCATGGACAAAACAGTTCGCCTTTGGTCCCTTGATAGCTGGCAATGT
ATGGTCGTCTACAAAGGCCACGACCGCCCTGTCTGGGACCTAAGCTGGGGGCCCTTCGGTCACTACTTTGTCTCC
GGTGGATCTGATAGGACCGCCCGTTTGTGGGTGAGTGACCAAATCCGCCAGCAGCGTATTTTTGTCGGTCATGAC
CAGGACGTGGATGTCGTCTGCTTCCACCCCAACTCGGCATACATTTTCACCGCCAGCTCTGATCACACTGTCCGT
ATGTGGGCTGTCTCGACTGGTAATGCTGTCCGCATGTTTACTGGCCACACTGGTAGTATCACCGCGATGGAGTGC
AGCCGCGATGGAAAGCTTCTGGCATCCGCCGACGACCAGGGCTGCATCATCTTGTGGGATCTAGCTCCTGGTAGA
CTGCTGAAGCGCATGCGTGGCCACGGTAAGGGTGGAATCTGGTCTGTCAGCTGGAGTGTGGAGTCCACAGTGTTG
GTCTCCGGTGGAGCCGATGGAACCGTGCGAGTCTGGGATGTTGCTGGTTCCCAGGAAACCACTCAGGGTGGCCGT
ATCCTCAATGAATCAGGCACTGGAACCAGACTGGATGCAGCCGCAAACCCCTCGACAAGCCAGACCAAGAAAAAG
AAGGGAAAAGATGTTGTTGTCACCGCCGACCAAATCAGCGCGTTCCCGACTAAGAAGTCTCCTGTCTATAGGGTC
AAGTTCACCAATATGAATCTGGTGGTTGCTGGTGGTGCCTATTTGCCTTAA
Gene >Pro_DTO377G3_2|g8845.t1
ATGGAAACTCACGGCAAGGATTTCGAGCCTCGCCGGTACCCACAACCGACCTTACCGGCCCAGATGATCAAGAAA
AGACATGAGCCGGTGGCGGCTGATATGACTCCGGCACAATATGTGCCGTGTCCACCCATCGCAAAGCCTTCACAA
GCCCTCACTTCTGAGCAGGCACGCGAACGTGATTTGGCAGTGTGTTTATTCACTAAGCCCTCCTCCTGCACCGCT
TGCTTATCTTGCCTTTTTTTTTCTGCTCAAATACATTCGGTTTGAATTGTACGCTAACCTTCGGTATTTTCTAGG
TTATTGATTATTTGGCCAAGAAGGGCTACAGCCGTACAGAGGCAATGTTGCGCATGGAATCTGCCAACCAGGAGA
TTGATGGGCGTCCGCTCCCTCAGCTGGGGGAAGATTCCCGTCCCAAGACTCGACAAGGGTTTGGTGAGCTAGATA
TTCCATTCAGGTGACCCAACATAGCAACTAATGCATCACTAGATTTACTGAAGAATTGGGTTGAGGAAAATCTTG
ATCTGTACAAGGTGCGACAGACAAGGAGTGACTTGATAAGCCAATGCTAATTGTCTTGTAGCCTGAACTTCGGCG
TGTTCTATGGCCGCTGTTCGTCTATTCCTTTTTCAATATGGTCACTTCCTTCTATCCTCAGGATGCGAAGTCATT
TTTCGAAACCAACAAGAACATGTTCCTTCCCGAGCATACCGATGACGTCCGCCACTTCGAGCCTATCAGCTTACC
GGAGCACCTGCAAGATAACTCCGTTGCTAAGCTTTATCGAAACAACAAATACCGCGTTGTGTTAAGCAACCCTGC
TTACACCAATCTTCTCCAGTTCCTGGAGAGCAAGGACAAGGAGGGGGGTTCTGTCATGAACGCAATTCTCAGCAG
CTTTTGCTCGGTGAAGACTTTGGACCGAGCAGCAGATGACCGATTCAGTTTCGCTGCCATGTTGAACCAGATCAG
TGCAGACCAGACCTTCCCGGCTGAGGATGAAGGCATTCCGGGACACCACCCCGGCTCGGCTTACACCGGTGACAA
CCCGGCCATGGCCGGCACACTTCCTCGCCTGAAACTCGGAAGACTCCCTATGGAACAGCTTCTAGAGGAGGATGT
GCGGGCTGAATTAGCCGAGGAAGATGCGAAACAACCTCCTGTCGCTGGCCGTAACACGCTCATTCAAGAGTTCGA
CCAAATGATTAAGAATGAAGATGACGACGAAGCACCTAGTCGTGCAGATATTCCTTTCCCTCCGTCCACTGCTCG
TGACGTTCAAATTGAGGTGAAGAAAGTCATGGAACACCGTGATCGGTTCGAGATCAAGGCTCGCACAGGTGGTGT
CGGTCCTGGACTTAGTGTGTGCATGTTCACATTCCACAACACTTATGATGGGTATGTTCATCTGGACAATCTTCG
TAATACAGAGCTTTACTAACAAATATACAGCGTCACTTGCATGGACTTTTCAGATGACAGCCAGATTGTTGCCGT
CGGATTCCAGCAGTCGTATATCCGGATTTGGAGCCTCGATGGCACGAACATTCAAGCTGCTGACCCTGAGTTTGA
TAACTCACCACCTGCCAGTTCGCGCCGTCTTATCGGTCATTCCGGTCCCGTCACTGCTGTTGCATTTCAGCCCTG
CGCCACTGCTCGCGAGGGCATTTCGGAGGATGACAAGGTTCCAACCAATGCACGCTGGTTGCTTTCATCATCCAT
GGACAAAACAGTTCGCCTTTGGTCCCTTGATAGCTGGCAATGTATGGTCGTCTACAAAGGCCACGACCGCCCTGT
CTGGGACCTAAGCTGGGGGCCCTTCGGTCACTACTTTGTCTCCGGTGGATCTGATAGGACCGCCCGTTTGTGGGT
GAGTGACCAAATCCGCCAGCAGCGTATTTTTGTCGGTCATGACCAGGACGTGGATGTCGTCTGCTTCCACCCCAA
CTCGGCATACATTTTCACCGCCAGCTCTGATCACACTGTCCGTATGTGGGCTGTCTCGACTGGTAATGCTGTCCG
CATGTTTACTGGCCACACTGGTAGTATCACCGCGATGGAGTGCAGCCGCGATGGAAAGCTTCTGGCATCCGCCGA
CGACCAGGGCTGCATCATCTTGTGGGATCTAGCTCCTGGTAGACTGCTGAAGCGCATGCGTGGCCACGGTAAGGG
TGGAATCTGGTCTGTCAGCTGGAGTGTGGAGTCCACAGTGTTGGTCTCCGGTGGAGCCGATGGAACCGTGCGAGT
CTGGGATGTTGCTGGTTCCCAGGAAACCACTCAGGGTGGCCGTATCCTCAATGAATCAGGCACTGGAACCAGACT
GGATGCAGCCGCAAACCCCTCGACAAGCCAGACCAAGAAAAAGAAGGGAAAAGATGTTGTTGTCACCGCCGACCA
AATCAGCGCGTTCCCGACTAAGAAGTCTCCTGTCTATAGGGTCAAGTTCACCAATATGAATCTGGTGGTTGCTGG
TGGTGCCTATTTGCCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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