© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g8832.t1 |
| Gene name | |
| Location | scaffold_37:183239..184004 |
| Strand | + |
| Gene length (bp) | 765 |
| Transcript length (bp) | 765 |
| Coding sequence length (bp) | 765 |
| Protein length (aa) | 255 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 1.9E-05 | 117 | 140 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0046872 | metal ion binding | Yes |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0043169 | cation binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 50 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g8832.t1 MAAETESAAAQILSAEPTRDPSYNDFSFTPFLRKSFGFGLASDVPVCKAYSEGHCPLGPACPDRHPTPSRVTTST TTASGMAPSTTHGSLVCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCTNGDDCLYQHVREEARLPPCE HYDRGYCELGPLCAKRHVRRRLCTFYLAGFCPDGKACADAHPRWPENLPRPTMRTEKTEEELEHERVLIREEQER EKEREREWRNERGRGGGFGRGRFRGRGRG* |
| Coding | >Pro_DTO377G3_2|g8832.t1 ATGGCTGCCGAAACTGAAAGTGCAGCTGCGCAAATCCTATCCGCCGAGCCGACGCGCGATCCCAGCTACAATGAC TTTTCTTTCACACCCTTTCTGCGCAAGAGCTTCGGCTTCGGACTCGCCAGCGATGTACCTGTTTGCAAAGCCTAT AGTGAAGGACACTGTCCATTAGGGCCTGCCTGTCCAGATCGGCATCCCACTCCGTCCCGTGTGACAACCTCGACT ACCACAGCCTCCGGAATGGCGCCATCTACAACACACGGATCGCTGGTTTGCAAACATTTCCTCAAGGGACTCTGT AAGAAAGGACTGAAATGCGAATACCTCCACGAATATAACCTCCGACGAATGCCAGAATGCCAGTCATTTTCTCGA TCTGGATACTGTACCAATGGTGACGATTGCCTTTATCAGCATGTTCGAGAGGAGGCACGACTGCCGCCTTGCGAA CACTACGACCGTGGATATTGCGAATTGGGACCATTATGTGCAAAGCGACACGTCCGCCGACGTCTATGTACATTC TATCTGGCCGGGTTCTGCCCTGATGGGAAAGCGTGTGCCGATGCCCACCCTCGCTGGCCGGAAAATCTACCACGG CCTACAATGCGTACTGAAAAGACAGAGGAAGAACTTGAGCATGAACGAGTTCTCATCCGTGAAGAACAAGAACGC GAAAAAGAACGGGAACGAGAATGGCGAAATGAACGTGGTCGGGGCGGTGGATTTGGGCGTGGCCGCTTCCGCGGG CGTGGAAGAGGTTAG |
| Transcript | >Pro_DTO377G3_2|g8832.t1 ATGGCTGCCGAAACTGAAAGTGCAGCTGCGCAAATCCTATCCGCCGAGCCGACGCGCGATCCCAGCTACAATGAC TTTTCTTTCACACCCTTTCTGCGCAAGAGCTTCGGCTTCGGACTCGCCAGCGATGTACCTGTTTGCAAAGCCTAT AGTGAAGGACACTGTCCATTAGGGCCTGCCTGTCCAGATCGGCATCCCACTCCGTCCCGTGTGACAACCTCGACT ACCACAGCCTCCGGAATGGCGCCATCTACAACACACGGATCGCTGGTTTGCAAACATTTCCTCAAGGGACTCTGT AAGAAAGGACTGAAATGCGAATACCTCCACGAATATAACCTCCGACGAATGCCAGAATGCCAGTCATTTTCTCGA TCTGGATACTGTACCAATGGTGACGATTGCCTTTATCAGCATGTTCGAGAGGAGGCACGACTGCCGCCTTGCGAA CACTACGACCGTGGATATTGCGAATTGGGACCATTATGTGCAAAGCGACACGTCCGCCGACGTCTATGTACATTC TATCTGGCCGGGTTCTGCCCTGATGGGAAAGCGTGTGCCGATGCCCACCCTCGCTGGCCGGAAAATCTACCACGG CCTACAATGCGTACTGAAAAGACAGAGGAAGAACTTGAGCATGAACGAGTTCTCATCCGTGAAGAACAAGAACGC GAAAAAGAACGGGAACGAGAATGGCGAAATGAACGTGGTCGGGGCGGTGGATTTGGGCGTGGCCGCTTCCGCGGG CGTGGAAGAGGTTAG |
| Gene | >Pro_DTO377G3_2|g8832.t1 ATGGCTGCCGAAACTGAAAGTGCAGCTGCGCAAATCCTATCCGCCGAGCCGACGCGCGATCCCAGCTACAATGAC TTTTCTTTCACACCCTTTCTGCGCAAGAGCTTCGGCTTCGGACTCGCCAGCGATGTACCTGTTTGCAAAGCCTAT AGTGAAGGACACTGTCCATTAGGGCCTGCCTGTCCAGATCGGCATCCCACTCCGTCCCGTGTGACAACCTCGACT ACCACAGCCTCCGGAATGGCGCCATCTACAACACACGGATCGCTGGTTTGCAAACATTTCCTCAAGGGACTCTGT AAGAAAGGACTGAAATGCGAATACCTCCACGAATATAACCTCCGACGAATGCCAGAATGCCAGTCATTTTCTCGA TCTGGATACTGTACCAATGGTGACGATTGCCTTTATCAGCATGTTCGAGAGGAGGCACGACTGCCGCCTTGCGAA CACTACGACCGTGGATATTGCGAATTGGGACCATTATGTGCAAAGCGACACGTCCGCCGACGTCTATGTACATTC TATCTGGCCGGGTTCTGCCCTGATGGGAAAGCGTGTGCCGATGCCCACCCTCGCTGGCCGGAAAATCTACCACGG CCTACAATGCGTACTGAAAAGACAGAGGAAGAACTTGAGCATGAACGAGTTCTCATCCGTGAAGAACAAGAACGC GAAAAAGAACGGGAACGAGAATGGCGAAATGAACGTGGTCGGGGCGGTGGATTTGGGCGTGGCCGCTTCCGCGGG CGTGGAAGAGGTTAG |