Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8788.t1
Gene name
Locationscaffold_37:74006..75995
Strand-
Gene length (bp)1989
Transcript length (bp)1488
Coding sequence length (bp)1488
Protein length (aa) 496

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00083 Sugar_tr Sugar (and other) transporter 1.6E-78 21 472
PF07690 MFS_1 Major Facilitator Superfamily 1.6E-17 21 426

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0110165 cellular anatomical entity No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:0051179 localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.45

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 55 77 22
3 84 106 22
4 110 132 22
5 145 162 17
6 177 196 19
7 279 301 22
8 306 328 22
9 341 363 22
10 373 395 22
11 407 429 22
12 439 456 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 0.36 0.0 0.85
5d_25C Five days - 25 degrees Celsius 0.59 0.0 1.25
7d_25C Seven days - 25 degrees Celsius 0.50 0.0 1.08
10d_25C Ten days - 25 degrees Celsius 0.48 0.0 1.13
7d_15C Seven days - 15 degrees Celsius 0.17 0.0 0.45
7d_30C Seven days - 30 degrees Celsius 0.65 0.0 1.40

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 1.0 no
3d_25C 7d_25C 1.0 no
3d_25C 7d_15C 1.0 no
3d_25C 7d_30C 1.0 no
3d_25C 10d_25C 1.0 no
5d_25C 7d_25C 1.0 no
5d_25C 7d_15C 1.0 no
5d_25C 7d_30C 1.0 no
5d_25C 10d_25C 1.0 no
7d_25C 7d_15C 1.0 no
7d_25C 7d_30C 1.0 no
7d_25C 10d_25C 1.0 no
7d_15C 7d_30C 1.0 no
7d_15C 10d_25C 1.0 no
7d_30C 10d_25C 1.0 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8788.t1
MFEESIQGKRLRLLARLSCSLAFLVEGYQAGILGGVQDTKPYRDALGNPEGAEIIPMIASSYTLAATVMSIVVVV
VGMPLGRRNSILLGTVLIFFGGIIQAASYSVAQIIVARVICGFGIAFITCNVPMYMSEMSIHANERGPEVAINCS
SLLAGIALSYWADFGFTRMSNQLSWRLPVSIQSIFALFSAAGIFFCPDSPRWYYAKGRTAEGDITLARLYNVYRV
DNSAQPESASMELVRAEIMQNLQLEAEQENRLSWLSLVWDNTPLRVGRRIRISFIILSIQQMMGINIMVYYMPLI
FSNVGLSSFLSSLISAVALTVQFTGSLVTIPTIERIGRRRIMLVAAAVQSCCMLVFVVLNGLPSKTEKTQWAAAA
MMFPYMFMYGWGWVTCPWLYGPEIAPLKYRHIGAAVGLFGEWLFSFVTVIAGGIGLETSGWKIWIWPLIFNVLGF
VFVYFMCPDPTGRTLEEIDALFDTDFRLPHTSDEKLSVHQIENTA*
Coding >Pro_DTO377G3_2|g8788.t1
ATGTTCGAAGAATCCATTCAAGGCAAAAGACTTCGCCTTCTTGCCCGGCTGAGTTGCTCTTTGGCCTTTCTTGTT
GAGGGTTACCAGGCTGGAATTCTCGGAGGAGTGCAAGATACCAAACCATACCGTGATGCACTCGGAAACCCTGAA
GGGGCGGAGATAATCCCAATGATCGCATCTTCTTACACACTCGCAGCTACTGTAATGTCTATTGTGGTGGTTGTT
GTGGGGATGCCTCTAGGCCGCCGAAATTCAATCCTACTCGGCACGGTGTTGATATTCTTCGGTGGCATCATTCAG
GCAGCATCATACTCGGTAGCACAAATTATCGTAGCCCGGGTCATATGTGGTTTTGGTATCGCGTTTATTACATGC
AATGTCCCTATGTATATGTCTGAGATGAGTATCCATGCCAATGAGCGCGGCCCCGAGGTAGCGATCAACTGCTCT
TCGCTCCTCGCAGGTATCGCTTTATCTTACTGGGCGGACTTTGGATTCACAAGAATGTCAAATCAGCTATCCTGG
CGGTTGCCTGTTTCCATCCAATCCATATTTGCTCTCTTTTCAGCAGCCGGCATTTTCTTCTGTCCGGACTCACCA
AGGTGGTATTATGCAAAGGGGCGAACTGCTGAAGGCGATATCACCCTGGCAAGACTATACAATGTCTATCGTGTT
GACAATAGTGCTCAGCCCGAGAGTGCTTCCATGGAGCTTGTCAGAGCTGAGATTATGCAGAACCTCCAGCTTGAG
GCGGAACAAGAGAACCGACTCAGCTGGCTAAGCCTTGTTTGGGACAACACCCCGCTCCGTGTTGGCCGTCGGATA
AGGATATCTTTTATCATCCTATCCATTCAACAAATGATGGGAATCAATATCATGGTTTACTATATGCCGCTAATA
TTTTCGAACGTCGGCCTCTCGAGCTTTTTATCGTCGCTCATTTCTGCTGTTGCATTGACAGTCCAATTTACAGGC
TCACTGGTCACTATTCCTACAATTGAGAGGATTGGCCGGCGTCGAATCATGCTGGTTGCAGCTGCCGTTCAGAGC
TGTTGTATGCTTGTTTTCGTGGTTTTGAATGGTCTTCCTAGTAAGACGGAAAAGACCCAATGGGCAGCCGCTGCT
ATGATGTTCCCATATATGTTCATGTACGGCTGGGGATGGGTTACCTGTCCGTGGCTATATGGACCCGAGATCGCT
CCCCTCAAGTATCGCCACATCGGAGCCGCAGTTGGCCTGTTCGGGGAGTGGCTATTCAGTTTTGTGACAGTAATT
GCTGGCGGCATCGGGCTCGAGACATCCGGCTGGAAGATATGGATTTGGCCCCTTATTTTCAACGTGCTGGGTTTT
GTCTTCGTCTATTTCATGTGCCCTGATCCGACCGGGAGAACTCTGGAAGAAATTGACGCTCTATTTGACACGGAC
TTCAGATTACCACACACTTCCGACGAGAAGTTATCAGTGCATCAAATTGAGAATACGGCTTAA
Transcript >Pro_DTO377G3_2|g8788.t1
ATGTTCGAAGAATCCATTCAAGGCAAAAGACTTCGCCTTCTTGCCCGGCTGAGTTGCTCTTTGGCCTTTCTTGTT
GAGGGTTACCAGGCTGGAATTCTCGGAGGAGTGCAAGATACCAAACCATACCGTGATGCACTCGGAAACCCTGAA
GGGGCGGAGATAATCCCAATGATCGCATCTTCTTACACACTCGCAGCTACTGTAATGTCTATTGTGGTGGTTGTT
GTGGGGATGCCTCTAGGCCGCCGAAATTCAATCCTACTCGGCACGGTGTTGATATTCTTCGGTGGCATCATTCAG
GCAGCATCATACTCGGTAGCACAAATTATCGTAGCCCGGGTCATATGTGGTTTTGGTATCGCGTTTATTACATGC
AATGTCCCTATGTATATGTCTGAGATGAGTATCCATGCCAATGAGCGCGGCCCCGAGGTAGCGATCAACTGCTCT
TCGCTCCTCGCAGGTATCGCTTTATCTTACTGGGCGGACTTTGGATTCACAAGAATGTCAAATCAGCTATCCTGG
CGGTTGCCTGTTTCCATCCAATCCATATTTGCTCTCTTTTCAGCAGCCGGCATTTTCTTCTGTCCGGACTCACCA
AGGTGGTATTATGCAAAGGGGCGAACTGCTGAAGGCGATATCACCCTGGCAAGACTATACAATGTCTATCGTGTT
GACAATAGTGCTCAGCCCGAGAGTGCTTCCATGGAGCTTGTCAGAGCTGAGATTATGCAGAACCTCCAGCTTGAG
GCGGAACAAGAGAACCGACTCAGCTGGCTAAGCCTTGTTTGGGACAACACCCCGCTCCGTGTTGGCCGTCGGATA
AGGATATCTTTTATCATCCTATCCATTCAACAAATGATGGGAATCAATATCATGGTTTACTATATGCCGCTAATA
TTTTCGAACGTCGGCCTCTCGAGCTTTTTATCGTCGCTCATTTCTGCTGTTGCATTGACAGTCCAATTTACAGGC
TCACTGGTCACTATTCCTACAATTGAGAGGATTGGCCGGCGTCGAATCATGCTGGTTGCAGCTGCCGTTCAGAGC
TGTTGTATGCTTGTTTTCGTGGTTTTGAATGGTCTTCCTAGTAAGACGGAAAAGACCCAATGGGCAGCCGCTGCT
ATGATGTTCCCATATATGTTCATGTACGGCTGGGGATGGGTTACCTGTCCGTGGCTATATGGACCCGAGATCGCT
CCCCTCAAGTATCGCCACATCGGAGCCGCAGTTGGCCTGTTCGGGGAGTGGCTATTCAGTTTTGTGACAGTAATT
GCTGGCGGCATCGGGCTCGAGACATCCGGCTGGAAGATATGGATTTGGCCCCTTATTTTCAACGTGCTGGGTTTT
GTCTTCGTCTATTTCATGTGCCCTGATCCGACCGGGAGAACTCTGGAAGAAATTGACGCTCTATTTGACACGGAC
TTCAGATTACCACACACTTCCGACGAGAAGTTATCAGTGCATCAAATTGAGAATACGGCTTAA
Gene >Pro_DTO377G3_2|g8788.t1
ATGTTCGAAGAATCCATTCAAGGCAAAAGACTTCGCCTTCTTGCCCGGCTGAGTTGCTCTTTGGTGTGTCCACCC
ACATATTGATCAAGCCCAATGAGAACGACCCCTAATTATATTGAGCCAGGCCTTTCTTGTTGAGGGTTACCAGGC
TGGAATTCTCGGAGGAGTGCAAGATACCAAACCATACCGTGATGCACTCGGAGTAAGCTGCCTCCAACCAGTATT
GTATGTTCTCTGCTGACCTTCGGAAAGAACCCTGAAGGGGCGGAGATAATCCCAATGATCGCATCTTCTTACACA
CTCGCAGCTACTGTAATGTCTATTGTGGTGGTTGTTGTGGGGATGCCTCTAGGCCGCCGAAATTCAATCCTACTC
GGCACGGTGTTGATATTCTTCGGTGGCATCATTCAGGCAGCATCATACTCGGTAGCACAAATTATCGTAGCCCGG
GTCATATGTGTAAGTCTGTGCCCTTTCATCGACGTGTCCCGAATTCGAAATTAACATATGGCTACCTAACAGGGT
TTTGGTATCGCGGTAAGACAAGTGCAGCTTACGAGACTATTCCATTTCTGATGTCTCTCGCAGTTTATTACATGC
AATGTCCCTATGTATATGGTACGAGCGTCCCTCCTCTTGTTGACAACTACAACTGATCTGATGCAATGATCTAGT
CTGAGATGAGTATCCATGCCAATGAGCGCGGCCCCGAGGTAGCGATCAACTGCTCTTCGCTCCTCGCAGGTATCG
CTTTATCTTACTGGGCGGACTTTGGATTCACAAGAATGTCAAATCAGCTATCCTGGGTAAGGTTATAAATTCTCG
TTGCTAAAACTGGGAACTAATAGTTGAATTGTCAAAGCGGTTGCCTGTTTCCATCCAATCCATATTTGCTCTCTT
TTCAGCAGCCGGCATTTTCTTCTGTCCGGACTCACCAAGGTGGTATTATGCAAAGGGGCGAACTGCTGAAGGCGA
TATCACCCTGGCAAGACTATACAATGTCTATCGTGTTGACAATAGTGCTCAGCCCGAGAGTGCTTCCATGGAGCT
TGTCAGAGCTGAGATTATGCAGAACCTCCAGCTTGAGGCGGAACAAGAGAACCGACTCAGCTGGCTAAGCCTTGT
TTGGGACAACACCCCGCTCCGTGTTGGCCGTCGGATAAGGATATCTTTTATCATCCTATCCATTCAACAAATGAT
GGGAATCAATATCATGGTTTACTATATGCCGCTAATATTTTCGAACGTCGGCCTCTCGAGCTTTTTATCGTCGCT
CATTTCTGCTGTTGCATTGACAGTCCAATTTACAGGCTCACTGGTCACTATTCCTACAATTGAGAGGATTGGCCG
GCGTCGAATCATGCTGGTTGCAGCTGCCGTTCAGAGCTGTTGTATGCTTGTTTTCGTGGTTTTGAATGGTCTTCC
TAGTAAGACGGAAAAGACCCAATGGGCAGCCGCTGCTATGATGTTCCCATATATGTTCATGTACGGCTGGGGATG
GGTTACCTGTCCGTGGTAAGCATTCAAAGCTGTCAAATTTGCAATGCATAAAGTTGACACTTATTCTAGGCTATA
TGGACCCGAGGTATGATTCTTCGCTGTGCTCGGCACGCCTAATCTGACTTGAATATCCCCAGATCGCTCCCCTCA
AGTATCGCCACATCGGAGCCGCAGTTGGCCTGTTCGGGGAGTGGCTATTCAGTTTTGTGACAGTAATTGCTGGCG
GCATCGGGCTCGAGACATCCGGCTGGAAGATATGGATTTGGCCCCTTATTTTCAACGTGCTGGGTTTTGTCTTCG
TCTATTTCATGTGCCCTGATGTGAGTGCTCTACCATCGAAGCCCAAGAAGGCGATCTTGCTAACTCAATATCAAA
TAGCCGACCGGGAGAACTCTGGAAGAAATTGACGCTCTATTTGACACGGACTTCAGATTACCACACACTTCCGAC
GAGAAGTTATCAGTGCATCAAATTGAGAATACGGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail